Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400086002
CDS Infomation

pacid=37476705 polypeptide=PGSC0003DMP400057677 locus=PGSC0003DMG400035573 ID=PGSC0003DMT400086002.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGAACTACACAACAAAAAGAAATGGCCAAATAAGTGTTCAAGATGCACAAGTG
GCTGTGGTTATGGTGCCACTTTCAGCACAAGGCCATCTCAACCAGCTTCTCCACCTCTCG
AGGCTCATCACCTCGTATAATATCCCAGTCCATTATGTTGGAGCAACCACTCATATTCGC
CAGGCTAAGTTTCGTGTCCATGGTTTCGACCCTGGCACAGCTAAAAACCTATATTTTCAT
GAATTCCCTACACCACCTTTCGAAAATCCTCCTCCAAATCCTAATGCTTCAAATAAATTT
CCTAACCAATTAATCCCTTCATTTTATGCAACAATCCATCTCCGTGAGCCAGTGTGCTCT
CTTGTACGCCAACTACTAGGCGTCAATCATCGGAGAGTGATTGTTATTTATGATTCTATG
ATGAGTTGGGTAGTAGAGGATGTACCAGCAATTCCAAATGCTGAGTGCTACCGTTTTAAT
AGTATCTCAGCTTTCCATACGTTTTCATGCATCTGGGAATCCAGAGGGAAACCTTTACAA
GCTGGAACTGAAATATTCGAGGACATTTCATCAAACGAAAACTGTGCTACCCCAGAGTTA
TGGGAATTATGGAGTAAACAAAATTCCCTTGAAGGGAAAATTAGCTCTGGAGAACTTTAC
AATTCATCCAGAGTAATAGAAGGTTTATACCTTGATTTAGTAGCCAAAGAAATTAATGGC
TTAAACCTACGGGCTATTGGTCCATTCAATCCGTTGTTGCTGACTGAGCAGGACAATGAT
TCAAATAAACGTCACAAAACCTTGGATTGGCTTGACAAACAAGAACCGGACTCAGTGATA
TATGTGTCTTTTGGAACATCTACTTCTTTGTCGAATGAAGAAATTGAACAACTCGCCATT
GGGTTAGAGAAAAGCCTGCAAAAGTTCATTTGGGTTCTCAGAGATGCTGACAAAGGAGAT
GTTTTTGCAGGTGAAGAAAGGAGAGCTCGGCTGCCGGAAGGTTATGAAGAAAGAATAAAA
GGAAGAGGAATTATTGCAAGAGATTGGGCACCTCAGTTGGAAATTTTGGCACATCCTTCC
ACAGGTGGTTTTATGAGTCATTGCGGATGGAATTCGTGCATGGAAAGCATTTCCATGGGA
GTTCCTATAGCAGCCTGGCCAATGCACTCAGATCAACCAAGGAATTCTCAGCTGGTAACA
AAGTTCCTGAAAATTGGCCTAAATTTGAGACATGGGGCATGTCAGGATGAATTGGTTACA
TCAGAAATGGTTGAAAATGCTGTGAGAACTTTGATGGCTTCACCTGAGGGAGGTGAGATG
AGGAAGAGAGCATCAGAATTAAGTGTTGCTGTCAAACAATCAGTCATGGATGGGGAAGGT
ACTGGTACAGAGATGGATTCTTTTATCACACACATTACTCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400057677
PEP Infomation

pacid=37476705 transcript=PGSC0003DMT400086002 locus=PGSC0003DMG400035573 ID=PGSC0003DMT400086002.v4.03 annot-version=v4.03
Sequence

MAENYTTKRNGQISVQDAQVAVVMVPLSAQGHLNQLLHLSRLITSYNIPVHYVGATTHIR
QAKFRVHGFDPGTAKNLYFHEFPTPPFENPPPNPNASNKFPNQLIPSFYATIHLREPVCS
LVRQLLGVNHRRVIVIYDSMMSWVVEDVPAIPNAECYRFNSISAFHTFSCIWESRGKPLQ
AGTEIFEDISSNENCATPELWELWSKQNSLEGKISSGELYNSSRVIEGLYLDLVAKEING
LNLRAIGPFNPLLLTEQDNDSNKRHKTLDWLDKQEPDSVIYVSFGTSTSLSNEEIEQLAI
GLEKSLQKFIWVLRDADKGDVFAGEERRARLPEGYEERIKGRGIIARDWAPQLEILAHPS
TGGFMSHCGWNSCMESISMGVPIAAWPMHSDQPRNSQLVTKFLKIGLNLRHGACQDELVT
SEMVENAVRTLMASPEGGEMRKRASELSVAVKQSVMDGEGTGTEMDSFITHITR*

Transcript Sequence

Transcript ID

PGSC0003DMT400086002
Transcript Infomation

pacid=37476705 locus=PGSC0003DMG400035573 ID=PGSC0003DMT400086002.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGAACTACACAACAAAAAGAAATGGCCAAATAAGTGTTCAAGATGCACAAGTG
GCTGTGGTTATGGTGCCACTTTCAGCACAAGGCCATCTCAACCAGCTTCTCCACCTCTCG
AGGCTCATCACCTCGTATAATATCCCAGTCCATTATGTTGGAGCAACCACTCATATTCGC
CAGGCTAAGTTTCGTGTCCATGGTTTCGACCCTGGCACAGCTAAAAACCTATATTTTCAT
GAATTCCCTACACCACCTTTCGAAAATCCTCCTCCAAATCCTAATGCTTCAAATAAATTT
CCTAACCAATTAATCCCTTCATTTTATGCAACAATCCATCTCCGTGAGCCAGTGTGCTCT
CTTGTACGCCAACTACTAGGCGTCAATCATCGGAGAGTGATTGTTATTTATGATTCTATG
ATGAGTTGGGTAGTAGAGGATGTACCAGCAATTCCAAATGCTGAGTGCTACCGTTTTAAT
AGTATCTCAGCTTTCCATACGTTTTCATGCATCTGGGAATCCAGAGGGAAACCTTTACAA
GCTGGAACTGAAATATTCGAGGACATTTCATCAAACGAAAACTGTGCTACCCCAGAGTTA
TGGGAATTATGGAGTAAACAAAATTCCCTTGAAGGGAAAATTAGCTCTGGAGAACTTTAC
AATTCATCCAGAGTAATAGAAGGTTTATACCTTGATTTAGTAGCCAAAGAAATTAATGGC
TTAAACCTACGGGCTATTGGTCCATTCAATCCGTTGTTGCTGACTGAGCAGGACAATGAT
TCAAATAAACGTCACAAAACCTTGGATTGGCTTGACAAACAAGAACCGGACTCAGTGATA
TATGTGTCTTTTGGAACATCTACTTCTTTGTCGAATGAAGAAATTGAACAACTCGCCATT
GGGTTAGAGAAAAGCCTGCAAAAGTTCATTTGGGTTCTCAGAGATGCTGACAAAGGAGAT
GTTTTTGCAGGTGAAGAAAGGAGAGCTCGGCTGCCGGAAGGTTATGAAGAAAGAATAAAA
GGAAGAGGAATTATTGCAAGAGATTGGGCACCTCAGTTGGAAATTTTGGCACATCCTTCC
ACAGGTGGTTTTATGAGTCATTGCGGATGGAATTCGTGCATGGAAAGCATTTCCATGGGA
GTTCCTATAGCAGCCTGGCCAATGCACTCAGATCAACCAAGGAATTCTCAGCTGGTAACA
AAGTTCCTGAAAATTGGCCTAAATTTGAGACATGGGGCATGTCAGGATGAATTGGTTACA
TCAGAAATGGTTGAAAATGCTGTGAGAACTTTGATGGCTTCACCTGAGGGAGGTGAGATG
AGGAAGAGAGCATCAGAATTAAGTGTTGCTGTCAAACAATCAGTCATGGATGGGGAAGGT
ACTGGTACAGAGATGGATTCTTTTATCACACACATTACTCGATAA