Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400085749
CDS Infomation

pacid=37432915 polypeptide=PGSC0003DMP400057424 locus=PGSC0003DMG400035320 ID=PGSC0003DMT400085749.v4.03 annot-version=v4.03
Sequence

ATGGCTGCACAGCTTACTTGTATCACCACCATTAGCGACCTCCCCGATGTCATCCTCTCC
AACATCATCGCCGCCGTCTCCGACGTCCGCAGCCGCAACTCCACCTCCCTCGTCTGCCGG
AAATGGCTCGTCCTCGAACGTTCCACGCGCTCCTCTCTCACGCTCCGTGGCAACGTCCGT
GACCTCTTCATGTTACCCACTTGCTTCAGATCCGTTACTCACCTTGACCTCTCCCTTATC
TCACCTTGGGGTCATCCACTCCTCTCCCCCACCGCCGTTGCTGACCCTTTCTTAATCGCC
CAACTCCTCCACCACGCGTTTCCGTCCATCACTTCCCTCGTTCTGTACACGCGCAACCCG
TGTACCCTAAGGATCTTGCCTCCGTTATGGCCAAACCTCAAGGAAATCAAGCTTGTTCGA
TGGCATCAACGTCCGCAATTATCAGCTGGGGAGGAGCTCAATATGCTATTTACAGAGAAT
TGCCCAAAGCTTCATTCGCTAGATTTGTCCAATTTTTACTGCTGGACGGATGATATTCCT
GTCGCACTTGAATCTCATCCTACAGTTGCAGCTAATCTCACGAGCTTAAATCTCTTGAAT
TCGAGTTTTCCTGAAGGGTTTAAGTCTGATGAGATTAGCTCGATAACGCGAGCTTGCCCC
AATTTGAAGGAGTTACGTGTTGCTTGTATGTTTGATCCCAGGTACATTGGGTTTGTTGGT
GATGAAGGTTTGGTTTCTATAGCTAACAATTGTCCCAAATTATCAGTGCTTCATTTGGCT
GATACTTCAGCTTTGTCAAACGCTAGGGGTGATCGAAATGATGAGGGGTTCACTCAAGAG
GACGCGAAGTTTAGTGTTTCAACTTTGATTGAGGTATTTTCTGGTCTTCCAATACTTGAA
GAGCTTGTTTTAGATGTTTGTAATAATGTTAGAGACACCGGTCCTGCGTTGGAAATTTTG
AATAAGAAATGCCCTAAATTGAGATCGTTGAAGTTGGGGCAATTCCATGGTGTTTCTATG
CCAATTGAATCAAAGTTGGACGGAGTGGCTCTTTGTGAAGGGCTTCAATCGTTGTCGATA
AGGAATGTGGGGGACTTGAATGATATGGGTTTGATAGCTATCGGTAGAGGGTGTTCGAGG
TTAACCAAGTTTGAGATTCAAGGTTGTAAAAAGATTACTATGAGGGGCATGAGGACACTA
GCTTCTTTGCTTAAGAATACGTTGGTTGATGTCAAGATATCTTGCTGCAAGAATCTTGGA
GCCTCTTATTCATTGAAAGCATTGGAGCCAATACAAGAACGGATCCAAAGGCTTCACATT
GATTGTGTGTGGGATAGCGTTGAAGAATTTGAAGATCTTGATGGCTATGGATACGGGTTT
GATCTTAATGTGAACGATGGAGGTGAGGCATCAAGCAACTCTACTGGTTCTGGGGACACA
TTTGAATGCAAGGAAGATGCATTCATGTTTAAACAACAGAAAAGATGCAAGTATGAGGAA
GTCAATGGCCACGCTAATGGATATAGTGGACGATCATGGGATCAGCTGCAATCCCTCTCT
CTTTGGATTGAGGTTGGTGAGCTTCTGACTCCTTTAACAGCTGCAGGTCTTGAAGACTGT
CCTAACTTAGAAGAGATCAGCATTAAAGTGGAAGGAGATTGCAGGCTATGGTCAAAACCT
TCGGGGAGAGAATTTGGACTGAGCACTCTTCTATACTATCCTATGCTATCCAAGATGCAT
TTGGATTGTGGAGATACCATAGGTTATGCACACACCGCGCCATCAGGGCAGATGGATTTG
AGCTTGTGGGAAAGGTTTTATCTGTTTGGGATTGGAAATTTGAGCCTTACTGAACTTGAT
TACTGGCCACCACAAGATAGGGACGTTAACCAAAGGTGTCTATCCCTACCAGCAGCTGGG
CTGCTACAAGAATGTGTCACTCTCAGAAAACTCTTCATCCATGGAACAGCACATGAACAT
TTCATGATGTTCTTTCTTAGGATCCCGAACTTAAGAGATGTACAACTGAGAGAAGATTAC
TATCCCGCACCTGAGAATGACATGAGTACAGAGATGAGGGCAGACTCGTTGAGCCGCTTT
GAAGCTGCCCTAAACAGGCGTTCAATATCTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400057424
PEP Infomation

pacid=37432915 transcript=PGSC0003DMT400085749 locus=PGSC0003DMG400035320 ID=PGSC0003DMT400085749.v4.03 annot-version=v4.03
Sequence

MAAQLTCITTISDLPDVILSNIIAAVSDVRSRNSTSLVCRKWLVLERSTRSSLTLRGNVR
DLFMLPTCFRSVTHLDLSLISPWGHPLLSPTAVADPFLIAQLLHHAFPSITSLVLYTRNP
CTLRILPPLWPNLKEIKLVRWHQRPQLSAGEELNMLFTENCPKLHSLDLSNFYCWTDDIP
VALESHPTVAANLTSLNLLNSSFPEGFKSDEISSITRACPNLKELRVACMFDPRYIGFVG
DEGLVSIANNCPKLSVLHLADTSALSNARGDRNDEGFTQEDAKFSVSTLIEVFSGLPILE
ELVLDVCNNVRDTGPALEILNKKCPKLRSLKLGQFHGVSMPIESKLDGVALCEGLQSLSI
RNVGDLNDMGLIAIGRGCSRLTKFEIQGCKKITMRGMRTLASLLKNTLVDVKISCCKNLG
ASYSLKALEPIQERIQRLHIDCVWDSVEEFEDLDGYGYGFDLNVNDGGEASSNSTGSGDT
FECKEDAFMFKQQKRCKYEEVNGHANGYSGRSWDQLQSLSLWIEVGELLTPLTAAGLEDC
PNLEEISIKVEGDCRLWSKPSGREFGLSTLLYYPMLSKMHLDCGDTIGYAHTAPSGQMDL
SLWERFYLFGIGNLSLTELDYWPPQDRDVNQRCLSLPAAGLLQECVTLRKLFIHGTAHEH
FMMFFLRIPNLRDVQLREDYYPAPENDMSTEMRADSLSRFEAALNRRSISD*

Transcript Sequence

Transcript ID

PGSC0003DMT400085749
Transcript Infomation

pacid=37432915 locus=PGSC0003DMG400035320 ID=PGSC0003DMT400085749.v4.03 annot-version=v4.03
Sequence

ATGGCTGCACAGCTTACTTGTATCACCACCATTAGCGACCTCCCCGATGTCATCCTCTCC
AACATCATCGCCGCCGTCTCCGACGTCCGCAGCCGCAACTCCACCTCCCTCGTCTGCCGG
AAATGGCTCGTCCTCGAACGTTCCACGCGCTCCTCTCTCACGCTCCGTGGCAACGTCCGT
GACCTCTTCATGTTACCCACTTGCTTCAGATCCGTTACTCACCTTGACCTCTCCCTTATC
TCACCTTGGGGTCATCCACTCCTCTCCCCCACCGCCGTTGCTGACCCTTTCTTAATCGCC
CAACTCCTCCACCACGCGTTTCCGTCCATCACTTCCCTCGTTCTGTACACGCGCAACCCG
TGTACCCTAAGGATCTTGCCTCCGTTATGGCCAAACCTCAAGGAAATCAAGCTTGTTCGA
TGGCATCAACGTCCGCAATTATCAGCTGGGGAGGAGCTCAATATGCTATTTACAGAGAAT
TGCCCAAAGCTTCATTCGCTAGATTTGTCCAATTTTTACTGCTGGACGGATGATATTCCT
GTCGCACTTGAATCTCATCCTACAGTTGCAGCTAATCTCACGAGCTTAAATCTCTTGAAT
TCGAGTTTTCCTGAAGGGTTTAAGTCTGATGAGATTAGCTCGATAACGCGAGCTTGCCCC
AATTTGAAGGAGTTACGTGTTGCTTGTATGTTTGATCCCAGGTACATTGGGTTTGTTGGT
GATGAAGGTTTGGTTTCTATAGCTAACAATTGTCCCAAATTATCAGTGCTTCATTTGGCT
GATACTTCAGCTTTGTCAAACGCTAGGGGTGATCGAAATGATGAGGGGTTCACTCAAGAG
GACGCGAAGTTTAGTGTTTCAACTTTGATTGAGGTATTTTCTGGTCTTCCAATACTTGAA
GAGCTTGTTTTAGATGTTTGTAATAATGTTAGAGACACCGGTCCTGCGTTGGAAATTTTG
AATAAGAAATGCCCTAAATTGAGATCGTTGAAGTTGGGGCAATTCCATGGTGTTTCTATG
CCAATTGAATCAAAGTTGGACGGAGTGGCTCTTTGTGAAGGGCTTCAATCGTTGTCGATA
AGGAATGTGGGGGACTTGAATGATATGGGTTTGATAGCTATCGGTAGAGGGTGTTCGAGG
TTAACCAAGTTTGAGATTCAAGGTTGTAAAAAGATTACTATGAGGGGCATGAGGACACTA
GCTTCTTTGCTTAAGAATACGTTGGTTGATGTCAAGATATCTTGCTGCAAGAATCTTGGA
GCCTCTTATTCATTGAAAGCATTGGAGCCAATACAAGAACGGATCCAAAGGCTTCACATT
GATTGTGTGTGGGATAGCGTTGAAGAATTTGAAGATCTTGATGGCTATGGATACGGGTTT
GATCTTAATGTGAACGATGGAGGTGAGGCATCAAGCAACTCTACTGGTTCTGGGGACACA
TTTGAATGCAAGGAAGATGCATTCATGTTTAAACAACAGAAAAGATGCAAGTATGAGGAA
GTCAATGGCCACGCTAATGGATATAGTGGACGATCATGGGATCAGCTGCAATCCCTCTCT
CTTTGGATTGAGGTTGGTGAGCTTCTGACTCCTTTAACAGCTGCAGGTCTTGAAGACTGT
CCTAACTTAGAAGAGATCAGCATTAAAGTGGAAGGAGATTGCAGGCTATGGTCAAAACCT
TCGGGGAGAGAATTTGGACTGAGCACTCTTCTATACTATCCTATGCTATCCAAGATGCAT
TTGGATTGTGGAGATACCATAGGTTATGCACACACCGCGCCATCAGGGCAGATGGATTTG
AGCTTGTGGGAAAGGTTTTATCTGTTTGGGATTGGAAATTTGAGCCTTACTGAACTTGAT
TACTGGCCACCACAAGATAGGGACGTTAACCAAAGGTGTCTATCCCTACCAGCAGCTGGG
CTGCTACAAGAATGTGTCACTCTCAGAAAACTCTTCATCCATGGAACAGCACATGAACAT
TTCATGATGTTCTTTCTTAGGATCCCGAACTTAAGAGATGTACAACTGAGAGAAGATTAC
TATCCCGCACCTGAGAATGACATGAGTACAGAGATGAGGGCAGACTCGTTGAGCCGCTTT
GAAGCTGCCCTAAACAGGCGTTCAATATCTGATTGA