Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400085728
CDS Infomation

pacid=37427268 polypeptide=PGSC0003DMP400057403 locus=PGSC0003DMG400035299 ID=PGSC0003DMT400085728.v4.03 annot-version=v4.03
Sequence

ATGGCCCATAACGTGTTTCGGGCCAAACAGCAATCGTCTTCTCCGAGAGACAAATCTCTG
TTCGCGGCCGCCATAGTTGCGGTTTTACTTGTCTGTGCTATTTGGTCATTTACTGATCCT
TTGCCTAATTTATCAGGTTTGTTATACAGTCAGAGTATTAGTTCACCGGATTATTGCCCA
CCGGGACGAGAAGCGGTTGACCGGAGTTCCGACCCGCCGGAGAAAACATTCTACGATGAA
CCGGAACTCAGTTACACTATTAACAAACCAATCAAAAATTGGGACGAAAAGAGAGTTCAG
TGGCTGAAGCTTCATCCTTCGTTCGCCGCCGGAAGAGTTAACCGTGTGCTCCTCCTCTCA
GGATCACAGCCCACTCCATGCAAAAACCCTAGAGGTGATCATTTACTCTTAAGGTTTTTC
AAAAACAAAGTTGATTACTGTAGAATCCATGGCTACGATATTTTCTACGGAAACACGTTT
TTTCACCCTAAAATGCGTTCTTATTGGGCCAAAATACCGCTTGTTCGGGCCGCCATGCTG
GCTCATCCTGAATCCGAGTGGATTCTATGGATTGATTCAGATGCAATTTTCACTGATATG
GATTTCAAAATTCCATTACACAAATACAATGACTACAACTTCATCGTCCATGGCTGGCCT
GATTTGATTTTTAAGAAGAAAAGCTGGGTCGCTATAAATGCTGGGATTTTTCTTATCCGA
AACTGTCAATGGTCTATGGATTTCTTAGATGTTTGGGCTAATATGGGCCCGAAAAGCCCA
GAATACAAGCAATGGGGCAAAATCTTACGAACAACTTTCAAGGACAAAACGTTCCCGGAG
TCCGATGACCAATCAGCACTGAGCTATTTAATACTGAAAGGAGAACGAAAATGGCGGAGC
AAAATTCACGCAATCACTGATTACTCTCTACACGGCTACTGGCTAGGAATAGTAAACAGA
TTTGACAAAATAACAGAGAATTACACGAAGATAGAGAGAGATGTACCGAAGTTACGGAGG
AGACACGCGGAGGCAGTGAGCGACAGCTACGCGGAGGCGAGGGAGCCGTTGTTGGCGGAG
GGCGAGGACGGAAAGGGCGGATGGAGGCGGCCGTTTATCACGCACTTCACGGGGTGTCAG
CCATGTAGTGGGGACCACGCGGCGGAGTATGTGGGTGATTCATGTTGGGTGGGAATGGAG
CGAGCGTTGAACTTTGCGGATAATCAGGTGCTACGTAACTTCGGATTCATGCATGATGAT
ATCAAAAGTAATTCCCCTGTCTCTCCGTTAAATTTCGATTTTCCAGCTGAAGACAGTGAA
GAATTCGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400057403
PEP Infomation

pacid=37427268 transcript=PGSC0003DMT400085728 locus=PGSC0003DMG400035299 ID=PGSC0003DMT400085728.v4.03 annot-version=v4.03
Sequence

MAHNVFRAKQQSSSPRDKSLFAAAIVAVLLVCAIWSFTDPLPNLSGLLYSQSISSPDYCP
PGREAVDRSSDPPEKTFYDEPELSYTINKPIKNWDEKRVQWLKLHPSFAAGRVNRVLLLS
GSQPTPCKNPRGDHLLLRFFKNKVDYCRIHGYDIFYGNTFFHPKMRSYWAKIPLVRAAML
AHPESEWILWIDSDAIFTDMDFKIPLHKYNDYNFIVHGWPDLIFKKKSWVAINAGIFLIR
NCQWSMDFLDVWANMGPKSPEYKQWGKILRTTFKDKTFPESDDQSALSYLILKGERKWRS
KIHAITDYSLHGYWLGIVNRFDKITENYTKIERDVPKLRRRHAEAVSDSYAEAREPLLAE
GEDGKGGWRRPFITHFTGCQPCSGDHAAEYVGDSCWVGMERALNFADNQVLRNFGFMHDD
IKSNSPVSPLNFDFPAEDSEEFV*

Transcript Sequence

Transcript ID

PGSC0003DMT400085728
Transcript Infomation

pacid=37427268 locus=PGSC0003DMG400035299 ID=PGSC0003DMT400085728.v4.03 annot-version=v4.03
Sequence

ATGGCCCATAACGTGTTTCGGGCCAAACAGCAATCGTCTTCTCCGAGAGACAAATCTCTG
TTCGCGGCCGCCATAGTTGCGGTTTTACTTGTCTGTGCTATTTGGTCATTTACTGATCCT
TTGCCTAATTTATCAGGTTTGTTATACAGTCAGAGTATTAGTTCACCGGATTATTGCCCA
CCGGGACGAGAAGCGGTTGACCGGAGTTCCGACCCGCCGGAGAAAACATTCTACGATGAA
CCGGAACTCAGTTACACTATTAACAAACCAATCAAAAATTGGGACGAAAAGAGAGTTCAG
TGGCTGAAGCTTCATCCTTCGTTCGCCGCCGGAAGAGTTAACCGTGTGCTCCTCCTCTCA
GGATCACAGCCCACTCCATGCAAAAACCCTAGAGGTGATCATTTACTCTTAAGGTTTTTC
AAAAACAAAGTTGATTACTGTAGAATCCATGGCTACGATATTTTCTACGGAAACACGTTT
TTTCACCCTAAAATGCGTTCTTATTGGGCCAAAATACCGCTTGTTCGGGCCGCCATGCTG
GCTCATCCTGAATCCGAGTGGATTCTATGGATTGATTCAGATGCAATTTTCACTGATATG
GATTTCAAAATTCCATTACACAAATACAATGACTACAACTTCATCGTCCATGGCTGGCCT
GATTTGATTTTTAAGAAGAAAAGCTGGGTCGCTATAAATGCTGGGATTTTTCTTATCCGA
AACTGTCAATGGTCTATGGATTTCTTAGATGTTTGGGCTAATATGGGCCCGAAAAGCCCA
GAATACAAGCAATGGGGCAAAATCTTACGAACAACTTTCAAGGACAAAACGTTCCCGGAG
TCCGATGACCAATCAGCACTGAGCTATTTAATACTGAAAGGAGAACGAAAATGGCGGAGC
AAAATTCACGCAATCACTGATTACTCTCTACACGGCTACTGGCTAGGAATAGTAAACAGA
TTTGACAAAATAACAGAGAATTACACGAAGATAGAGAGAGATGTACCGAAGTTACGGAGG
AGACACGCGGAGGCAGTGAGCGACAGCTACGCGGAGGCGAGGGAGCCGTTGTTGGCGGAG
GGCGAGGACGGAAAGGGCGGATGGAGGCGGCCGTTTATCACGCACTTCACGGGGTGTCAG
CCATGTAGTGGGGACCACGCGGCGGAGTATGTGGGTGATTCATGTTGGGTGGGAATGGAG
CGAGCGTTGAACTTTGCGGATAATCAGGTGCTACGTAACTTCGGATTCATGCATGATGAT
ATCAAAAGTAATTCCCCTGTCTCTCCGTTAAATTTCGATTTTCCAGCTGAAGACAGTGAA
GAATTCGTGTGA