Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400085430
CDS Infomation

pacid=37457928 polypeptide=PGSC0003DMP400057105 locus=PGSC0003DMG400035001 ID=PGSC0003DMT400085430.v4.03 annot-version=v4.03
Sequence

ATGGGATCGAGTACTCATTTATTCTCCTTTCTATGTCTTTTACTATGTTTTGTTTGCATA
CAAGCTCAAGATTTGCAAACTTACATAGTTCAGTTACATCCACATGGAGCAACAAGACCC
CCTTTTAGCTCTAAACTACAATGGCACCTTTCTTTCCTTGCAAAAGCAGTTTCCTCTGGA
GAACAAGACTCGTCTTCTCGTCTTTTGTACTCTTACCATTCTGCGATGGAAGGTTTTGCA
GCTCGACTCACTGAAGATGAGGTTGAGTTGTTAAGGGAATCTAATGATGTGTTGTCGATA
CGTGCTGAGAGGAGGCTTGAAATTCAGACTACTTATTCTTACAAGTTCTTGGGATTAAGT
CCAACGAGAGAAGGAGCTTGGTTGAAGTCTGGATTTGGTCGAGGGGCGATCATTGGAGTG
TTGGATACTGGAGTTTGGCCAGAAAGTCCAAGTTTTGATGATCATGGGATGCCACCTGCT
CCACAGAAGTGGAGGGGTGTCTGCCAAGGAGGACAGGATTTTAATTCTTCTAGTTGTAAT
CGCAAGCTTATTGGTGCAAGGTTTTTCAGAAAAGGACATCGTGTGGCTTCAATGACATCA
TCACCAGATGCAGTGGAGGAATATGTGTCGCCACGGGATTCCCATGGCCATGGTACACAT
ACAGCATCCACTGCTGGAGGAGCTGCAGTTCCATTGGCTGGTGTGCTCGGAAATGGAGCA
GGGGAGGCTCGAGGGATGGCCCCGGGTGCCCACATTGCAATATATAAAGTATGCTGGTTC
AGTGGTTGTTACAGCTCTGATATACTTGCAGCAATGGATGTGGCCATCAGAGATGGAGTA
GACATATTGTCACTCTCACTTGGTGGCTTCCCTATTCCACTTTATGATGATACTATTGCC
ATTGGAAGTTTCCGAGCCATGGAGCATGGAATTTCAGTTATATGTGCTGCAGGGAATAAT
GGACCAATCCAAAGTTCAGTAGCCAACGGTGCTCCTTGGATTGCCACTATTGGTGCTAGC
ACACTTGACAGGAGATTTCCAGCGTCAGTTCAGTTAGGCAACGGAAAGTTCCTGTACGGA
GAATCCTTGTACCCTGGGAAGAAAGTTCCTAGCTCTCAGAAGAATCTTGAGATCGTTTAT
GTAAAGGATAAGGACAAGGGAAGTGAATTTTGCTTGAGAGGATCGCTATCAAAAGCACAA
GTCCGAGGGAAAATGGTTGTGTGTGATAGGGGAGTCAATGGAAGGGCAGAAAAAGGCCAG
GTTGTGAAGGAGGCAGGTGGTGCTGCCATGATCTTAGCAAATACAGCAATAAATATGGAG
GAAGATTCCATTGATGTCCATGTCCTCCCAGCAACGTTGATTGGCTTCGATGAATCAATT
CAATTACAAAACTACCTGAACTCAACAAAAAGACCAACAGCTCGATTCATATTTGGAGGA
ACGGTAATAGGAAAGTCTAGAGCACCTGCAGTAGCTCAGTTTTCGTCAAGGGGGCCAAGC
TATACTGATCCTTCAATTCTCAAACCTGATTTGATTGCTCCAGGGGTAAACATAATTGCC
GCTTGGCCACAAAACTTAGGCCCCAGTGGTCTTCCCGAAGATTCACGAAGAGTAAATTTC
ACTGTTATGTCAGGGACCTCAATGGCATGTCCTCATGTAAGTGGAATTGCCGCATTGCTC
CATTCAGCTCATCCTAAATGGACTCCAGCAGCAATAAGATCCGCATTAATGACCACTGCA
GATACAGCTGATCATATGGGAAAACCAATCATGGATGGAGATGCACCAGCTAAACTTTTT
GCAGCTGGAGCTGGACACGTGAACCCTGGAAGAGCCATCGATCCTGGATTGATATATGAC
ATCCAGGTTGATGAATATATCACTCATCTTTGCACTATCGGATACAGAAATTCTGAAGTC
TTCAGCATTACTCATAGGAATGTCAGCTGCCATGACATTTTACAGAACAACAGGGGTTTC
AGCCTAAATTACCCCTCAATTTCAATAACTTTCAGAGCAGGAATGACTAGAAAGATAATC
AAGAGGAGAGTAACAAATGTGGGGAACCCTAACTCTATTTACTCAGTTGACATTGAGGCA
CCTGAGGGAGTCAAAGTGAGAGTGAAGCCACGTCGTCTGATATTTAAACATGTGAACCAA
AGCTTAAGCTATAGAGTTTGGTTTATATCACGAAAGAAAATAGAGTCTAAAAGGATGAGC
TTTGCAGAGGGGCAATTGACATGGTTCAATGTAGGAAACAAAGCCACGAAAGTTAAAAGT
CCTATTTCCGTCACATGGGCATCAATGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400057105
PEP Infomation

pacid=37457928 transcript=PGSC0003DMT400085430 locus=PGSC0003DMG400035001 ID=PGSC0003DMT400085430.v4.03 annot-version=v4.03
Sequence

MGSSTHLFSFLCLLLCFVCIQAQDLQTYIVQLHPHGATRPPFSSKLQWHLSFLAKAVSSG
EQDSSSRLLYSYHSAMEGFAARLTEDEVELLRESNDVLSIRAERRLEIQTTYSYKFLGLS
PTREGAWLKSGFGRGAIIGVLDTGVWPESPSFDDHGMPPAPQKWRGVCQGGQDFNSSSCN
RKLIGARFFRKGHRVASMTSSPDAVEEYVSPRDSHGHGTHTASTAGGAAVPLAGVLGNGA
GEARGMAPGAHIAIYKVCWFSGCYSSDILAAMDVAIRDGVDILSLSLGGFPIPLYDDTIA
IGSFRAMEHGISVICAAGNNGPIQSSVANGAPWIATIGASTLDRRFPASVQLGNGKFLYG
ESLYPGKKVPSSQKNLEIVYVKDKDKGSEFCLRGSLSKAQVRGKMVVCDRGVNGRAEKGQ
VVKEAGGAAMILANTAINMEEDSIDVHVLPATLIGFDESIQLQNYLNSTKRPTARFIFGG
TVIGKSRAPAVAQFSSRGPSYTDPSILKPDLIAPGVNIIAAWPQNLGPSGLPEDSRRVNF
TVMSGTSMACPHVSGIAALLHSAHPKWTPAAIRSALMTTADTADHMGKPIMDGDAPAKLF
AAGAGHVNPGRAIDPGLIYDIQVDEYITHLCTIGYRNSEVFSITHRNVSCHDILQNNRGF
SLNYPSISITFRAGMTRKIIKRRVTNVGNPNSIYSVDIEAPEGVKVRVKPRRLIFKHVNQ
SLSYRVWFISRKKIESKRMSFAEGQLTWFNVGNKATKVKSPISVTWASMK*

Transcript Sequence

Transcript ID

PGSC0003DMT400085430
Transcript Infomation

pacid=37457928 locus=PGSC0003DMG400035001 ID=PGSC0003DMT400085430.v4.03 annot-version=v4.03
Sequence

ATGGGATCGAGTACTCATTTATTCTCCTTTCTATGTCTTTTACTATGTTTTGTTTGCATA
CAAGCTCAAGATTTGCAAACTTACATAGTTCAGTTACATCCACATGGAGCAACAAGACCC
CCTTTTAGCTCTAAACTACAATGGCACCTTTCTTTCCTTGCAAAAGCAGTTTCCTCTGGA
GAACAAGACTCGTCTTCTCGTCTTTTGTACTCTTACCATTCTGCGATGGAAGGTTTTGCA
GCTCGACTCACTGAAGATGAGGTTGAGTTGTTAAGGGAATCTAATGATGTGTTGTCGATA
CGTGCTGAGAGGAGGCTTGAAATTCAGACTACTTATTCTTACAAGTTCTTGGGATTAAGT
CCAACGAGAGAAGGAGCTTGGTTGAAGTCTGGATTTGGTCGAGGGGCGATCATTGGAGTG
TTGGATACTGGAGTTTGGCCAGAAAGTCCAAGTTTTGATGATCATGGGATGCCACCTGCT
CCACAGAAGTGGAGGGGTGTCTGCCAAGGAGGACAGGATTTTAATTCTTCTAGTTGTAAT
CGCAAGCTTATTGGTGCAAGGTTTTTCAGAAAAGGACATCGTGTGGCTTCAATGACATCA
TCACCAGATGCAGTGGAGGAATATGTGTCGCCACGGGATTCCCATGGCCATGGTACACAT
ACAGCATCCACTGCTGGAGGAGCTGCAGTTCCATTGGCTGGTGTGCTCGGAAATGGAGCA
GGGGAGGCTCGAGGGATGGCCCCGGGTGCCCACATTGCAATATATAAAGTATGCTGGTTC
AGTGGTTGTTACAGCTCTGATATACTTGCAGCAATGGATGTGGCCATCAGAGATGGAGTA
GACATATTGTCACTCTCACTTGGTGGCTTCCCTATTCCACTTTATGATGATACTATTGCC
ATTGGAAGTTTCCGAGCCATGGAGCATGGAATTTCAGTTATATGTGCTGCAGGGAATAAT
GGACCAATCCAAAGTTCAGTAGCCAACGGTGCTCCTTGGATTGCCACTATTGGTGCTAGC
ACACTTGACAGGAGATTTCCAGCGTCAGTTCAGTTAGGCAACGGAAAGTTCCTGTACGGA
GAATCCTTGTACCCTGGGAAGAAAGTTCCTAGCTCTCAGAAGAATCTTGAGATCGTTTAT
GTAAAGGATAAGGACAAGGGAAGTGAATTTTGCTTGAGAGGATCGCTATCAAAAGCACAA
GTCCGAGGGAAAATGGTTGTGTGTGATAGGGGAGTCAATGGAAGGGCAGAAAAAGGCCAG
GTTGTGAAGGAGGCAGGTGGTGCTGCCATGATCTTAGCAAATACAGCAATAAATATGGAG
GAAGATTCCATTGATGTCCATGTCCTCCCAGCAACGTTGATTGGCTTCGATGAATCAATT
CAATTACAAAACTACCTGAACTCAACAAAAAGACCAACAGCTCGATTCATATTTGGAGGA
ACGGTAATAGGAAAGTCTAGAGCACCTGCAGTAGCTCAGTTTTCGTCAAGGGGGCCAAGC
TATACTGATCCTTCAATTCTCAAACCTGATTTGATTGCTCCAGGGGTAAACATAATTGCC
GCTTGGCCACAAAACTTAGGCCCCAGTGGTCTTCCCGAAGATTCACGAAGAGTAAATTTC
ACTGTTATGTCAGGGACCTCAATGGCATGTCCTCATGTAAGTGGAATTGCCGCATTGCTC
CATTCAGCTCATCCTAAATGGACTCCAGCAGCAATAAGATCCGCATTAATGACCACTGCA
GATACAGCTGATCATATGGGAAAACCAATCATGGATGGAGATGCACCAGCTAAACTTTTT
GCAGCTGGAGCTGGACACGTGAACCCTGGAAGAGCCATCGATCCTGGATTGATATATGAC
ATCCAGGTTGATGAATATATCACTCATCTTTGCACTATCGGATACAGAAATTCTGAAGTC
TTCAGCATTACTCATAGGAATGTCAGCTGCCATGACATTTTACAGAACAACAGGGGTTTC
AGCCTAAATTACCCCTCAATTTCAATAACTTTCAGAGCAGGAATGACTAGAAAGATAATC
AAGAGGAGAGTAACAAATGTGGGGAACCCTAACTCTATTTACTCAGTTGACATTGAGGCA
CCTGAGGGAGTCAAAGTGAGAGTGAAGCCACGTCGTCTGATATTTAAACATGTGAACCAA
AGCTTAAGCTATAGAGTTTGGTTTATATCACGAAAGAAAATAGAGTCTAAAAGGATGAGC
TTTGCAGAGGGGCAATTGACATGGTTCAATGTAGGAAACAAAGCCACGAAAGTTAAAAGT
CCTATTTCCGTCACATGGGCATCAATGAAGTGA