Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400085414
CDS Infomation

pacid=37480097 polypeptide=PGSC0003DMP400057089 locus=PGSC0003DMG400034985 ID=PGSC0003DMT400085414.v4.03 annot-version=v4.03
Sequence

ATGGATCTGAAATTCATCTCTACCTTTCTCTGCTTTGTCCTGCTTCATTCATCAAAGACA
TTTGGTGATAATTTCACTAATCAAAGTGATTTAGAAACTTATATAGTACATCTTAAATTT
CATGATCAACTTTTCTCAAATTCCAAAGATGTACTTCTCTGGCATCAATCATTTTTGCCT
ACAAATTCGAATCACTCATCGCGCATTTTGTATTCTTATCGTCATGTGTTAAATGGTTTT
GCTGCTATGTTGTCATCAGACGAAGTGAAAGAAATGGAAAAGAAGCCCGGTTTCTTGTCA
GCGCATCCCCAACGAATATTTCAGTTGCACACCACACACAGTCCAAGTTTCCTTGGGTTG
CACCAGAATGTTGGTTTGTGGAATGCATCAAATTCAGGTAAAGGTGTGACCATCGGTTTT
ATGGATACTGGAATTACTCCTCAACATCCTTCGTTTAATGATAATGGAATGCCTAATCCA
CCTCTTAAATGGAAAGGCAAATGTGAGTTCAATGTTACAAATTGTAGTAAGAAGCTTATT
GGAGCAAGAAATTATGTGCAAGAGAAAACGTTTCCTGCAGATCAAGTTGGCCACGGGACA
CTTACCTCAAGCATAGCTGTGGGGAACTTTGTGGATGGTGCCAATTATTTTGGTAATGCT
AATGGCACGGCTGTTGGCATTGCGCCCCGAGCCCATGTGGCCATGTACAAAGTCTGTGCG
GCATATTTTTGTGGAGAATCCACTATTTTTGCTGGTTTTGATGATGCAATTGAAGACGGT
GTGGATGTGATTGCCATTTCAATTGGATTAGCTGACCCCCAGCCTTTTTATGGTGATGTT
GTAGCTATTAGCTCGTATAGAGCGATGGAGAAGGGGATTTTTGTAAGTTCCTCTGCAGGA
AATGATGGACCAGGTAGTGGTACTGTGATGAATGGGGCCCCGTGGATTCTCACAGTTGGT
GCTAGCACAACAGATAGAAAGATAAGCGCTGTTGCAGTTCTGGGTAACGGAGCTGAATAT
GAAGGTGAATCATCCTTTCAACCAAAGAATTTTTCGCAAAAATTGTTACCACTTGTGAAT
GGCAAGGGATGTGAATCATTGAATTCAAGCAATGTCAAGGGTAAAATAGTGGTGTGTGAT
AGAAGCGGTGCCTGGGCTAGAATAAGCCAAGGAAGATTAGTGAAACTTGTCGGTGGTGCT
GGCATGATTCTCATTAATAATAAGAGACATGGCTCTACAACATTCTCAGAATATGATGCC
GTTCCCACGACACAGGTTAGTTACAAGGATGGACAAGAGATCATAAACTATATGAAATCA
ACATCAACACCAGTTGCAACGATATCATTTAGGGGAACGACATTTGGAGACAAGCACGCG
CCAACAGTTACTTACTTTTCTTCTAGGGGACCATTTATGCTGAGTCAGGGCATACTAAAG
CCAGACATTATTGGCCCTGGATTGAATATCCTTGCAGCGTGGCCAAAGCCTATAGCAGGA
CAGATGTTTGAGCTCCTTTATGGAACGTCCCTGTCTTGCCCTCATCTTGCAGGAGTTGCA
GCATTGTTAAAGAACGCACATCCAAATTGGTCTCCAGCTGCAATTAAATCCGCAATCATG
ACCACAGCTGACATCGTCAATCTTGGAAACGATCCAATTCAGGACGAGACACTAGAACCT
GCTGATCTATTTGCAGTCGGATCAGGACATGTGAATCCACCAAGAGCAAATGATCCAGGA
CTCATTTATGACATCCAGCCCGAAGATTACATCCCATACTTATGTGGCTTGAACTATACA
GATGATCAAGTCAGTATCATTGTAATAAAGAAGGTACATTGTACAAAAAGCATACCTCAA
TCAGAGTTGAACTATCCGTCATTTTCTATTCCTACGGAAGCAAGTGCTCAAACTTATACA
AGGACTGTGACTAACGTCGGAGAAGCAAGTTCAGCTTACAAAGTTGAAGTATTTGGGCTC
AAAGGCGTCGAGGTGACTGTTCAACCTAAAATCTTGAAATTTACAGCGTTGAATCAGAAG
GTGTCGTATAATGTAACAGTTAAGTCATCAGATCTTACAGGACATTTCCAAGGATACATA
ATTTGGTCTTCTGATAGGCATTCTGTTAGAAGTCCAATAAAAGTATTTCCCCATATCAGT
GTGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400057089
PEP Infomation

pacid=37480097 transcript=PGSC0003DMT400085414 locus=PGSC0003DMG400034985 ID=PGSC0003DMT400085414.v4.03 annot-version=v4.03
Sequence

MDLKFISTFLCFVLLHSSKTFGDNFTNQSDLETYIVHLKFHDQLFSNSKDVLLWHQSFLP
TNSNHSSRILYSYRHVLNGFAAMLSSDEVKEMEKKPGFLSAHPQRIFQLHTTHSPSFLGL
HQNVGLWNASNSGKGVTIGFMDTGITPQHPSFNDNGMPNPPLKWKGKCEFNVTNCSKKLI
GARNYVQEKTFPADQVGHGTLTSSIAVGNFVDGANYFGNANGTAVGIAPRAHVAMYKVCA
AYFCGESTIFAGFDDAIEDGVDVIAISIGLADPQPFYGDVVAISSYRAMEKGIFVSSSAG
NDGPGSGTVMNGAPWILTVGASTTDRKISAVAVLGNGAEYEGESSFQPKNFSQKLLPLVN
GKGCESLNSSNVKGKIVVCDRSGAWARISQGRLVKLVGGAGMILINNKRHGSTTFSEYDA
VPTTQVSYKDGQEIINYMKSTSTPVATISFRGTTFGDKHAPTVTYFSSRGPFMLSQGILK
PDIIGPGLNILAAWPKPIAGQMFELLYGTSLSCPHLAGVAALLKNAHPNWSPAAIKSAIM
TTADIVNLGNDPIQDETLEPADLFAVGSGHVNPPRANDPGLIYDIQPEDYIPYLCGLNYT
DDQVSIIVIKKVHCTKSIPQSELNYPSFSIPTEASAQTYTRTVTNVGEASSAYKVEVFGL
KGVEVTVQPKILKFTALNQKVSYNVTVKSSDLTGHFQGYIIWSSDRHSVRSPIKVFPHIS
VM*

Transcript Sequence

Transcript ID

PGSC0003DMT400085414
Transcript Infomation

pacid=37480097 locus=PGSC0003DMG400034985 ID=PGSC0003DMT400085414.v4.03 annot-version=v4.03
Sequence

ATGGATCTGAAATTCATCTCTACCTTTCTCTGCTTTGTCCTGCTTCATTCATCAAAGACA
TTTGGTGATAATTTCACTAATCAAAGTGATTTAGAAACTTATATAGTACATCTTAAATTT
CATGATCAACTTTTCTCAAATTCCAAAGATGTACTTCTCTGGCATCAATCATTTTTGCCT
ACAAATTCGAATCACTCATCGCGCATTTTGTATTCTTATCGTCATGTGTTAAATGGTTTT
GCTGCTATGTTGTCATCAGACGAAGTGAAAGAAATGGAAAAGAAGCCCGGTTTCTTGTCA
GCGCATCCCCAACGAATATTTCAGTTGCACACCACACACAGTCCAAGTTTCCTTGGGTTG
CACCAGAATGTTGGTTTGTGGAATGCATCAAATTCAGGTAAAGGTGTGACCATCGGTTTT
ATGGATACTGGAATTACTCCTCAACATCCTTCGTTTAATGATAATGGAATGCCTAATCCA
CCTCTTAAATGGAAAGGCAAATGTGAGTTCAATGTTACAAATTGTAGTAAGAAGCTTATT
GGAGCAAGAAATTATGTGCAAGAGAAAACGTTTCCTGCAGATCAAGTTGGCCACGGGACA
CTTACCTCAAGCATAGCTGTGGGGAACTTTGTGGATGGTGCCAATTATTTTGGTAATGCT
AATGGCACGGCTGTTGGCATTGCGCCCCGAGCCCATGTGGCCATGTACAAAGTCTGTGCG
GCATATTTTTGTGGAGAATCCACTATTTTTGCTGGTTTTGATGATGCAATTGAAGACGGT
GTGGATGTGATTGCCATTTCAATTGGATTAGCTGACCCCCAGCCTTTTTATGGTGATGTT
GTAGCTATTAGCTCGTATAGAGCGATGGAGAAGGGGATTTTTGTAAGTTCCTCTGCAGGA
AATGATGGACCAGGTAGTGGTACTGTGATGAATGGGGCCCCGTGGATTCTCACAGTTGGT
GCTAGCACAACAGATAGAAAGATAAGCGCTGTTGCAGTTCTGGGTAACGGAGCTGAATAT
GAAGGTGAATCATCCTTTCAACCAAAGAATTTTTCGCAAAAATTGTTACCACTTGTGAAT
GGCAAGGGATGTGAATCATTGAATTCAAGCAATGTCAAGGGTAAAATAGTGGTGTGTGAT
AGAAGCGGTGCCTGGGCTAGAATAAGCCAAGGAAGATTAGTGAAACTTGTCGGTGGTGCT
GGCATGATTCTCATTAATAATAAGAGACATGGCTCTACAACATTCTCAGAATATGATGCC
GTTCCCACGACACAGGTTAGTTACAAGGATGGACAAGAGATCATAAACTATATGAAATCA
ACATCAACACCAGTTGCAACGATATCATTTAGGGGAACGACATTTGGAGACAAGCACGCG
CCAACAGTTACTTACTTTTCTTCTAGGGGACCATTTATGCTGAGTCAGGGCATACTAAAG
CCAGACATTATTGGCCCTGGATTGAATATCCTTGCAGCGTGGCCAAAGCCTATAGCAGGA
CAGATGTTTGAGCTCCTTTATGGAACGTCCCTGTCTTGCCCTCATCTTGCAGGAGTTGCA
GCATTGTTAAAGAACGCACATCCAAATTGGTCTCCAGCTGCAATTAAATCCGCAATCATG
ACCACAGCTGACATCGTCAATCTTGGAAACGATCCAATTCAGGACGAGACACTAGAACCT
GCTGATCTATTTGCAGTCGGATCAGGACATGTGAATCCACCAAGAGCAAATGATCCAGGA
CTCATTTATGACATCCAGCCCGAAGATTACATCCCATACTTATGTGGCTTGAACTATACA
GATGATCAAGTCAGTATCATTGTAATAAAGAAGGTACATTGTACAAAAAGCATACCTCAA
TCAGAGTTGAACTATCCGTCATTTTCTATTCCTACGGAAGCAAGTGCTCAAACTTATACA
AGGACTGTGACTAACGTCGGAGAAGCAAGTTCAGCTTACAAAGTTGAAGTATTTGGGCTC
AAAGGCGTCGAGGTGACTGTTCAACCTAAAATCTTGAAATTTACAGCGTTGAATCAGAAG
GTGTCGTATAATGTAACAGTTAAGTCATCAGATCTTACAGGACATTTCCAAGGATACATA
ATTTGGTCTTCTGATAGGCATTCTGTTAGAAGTCCAATAAAAGTATTTCCCCATATCAGT
GTGATGTAA