Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400085311
CDS Infomation

pacid=37431986 polypeptide=PGSC0003DMP400056986 locus=PGSC0003DMG400034882 ID=PGSC0003DMT400085311.v4.03 annot-version=v4.03
Sequence

ATGGAGACCAAAGCAGAGCTTGTTTTCATTCCATCGCCGGGATTGGGTCACGTCGCCTCC
GCTGTCGAATTCGCCAAACTCGTTCTTGCTACAAATGAACGACTATGCATTTCTCTTCTC
ATCATGAAACATCCTGCCGATTTTGGTGTTCAATCTTATCTCCAATCACTCCCTTCTCTG
TCCCGCTTGCGCTTTATTGATGTTTCAATAGACCCGAAACTAGTTGTTGAACTTTTGTCT
AACAAGGACAGATTCTTATACGATTTCATTGATGGTCATAAACAGAAGGTAACTGAATTT
GTTACTAACAACATTACTAGTAATAATTCCAGCTCTTCCCAATTTGGCTCTACTCGGCTT
GCTGGCTTTGTTCTTGACATGTTCTGCATTTCCATGATTGATGTAGCAAATGAATTTCGT
GTTCCTAGTTACATTTTCTTTACTTCTGCTGCTGCTTTTCTTGCATTGTCCTTTCATTTT
GAAGCTCTGAGGAGTACCTCCAAGTTTGATTATTCCGAGTCTGATGAGGAATTGTCGATT
CTCGGATTTAAAAATCGGTATCCTGCTAAAGTTTTACCTAAGCCAGCTAAGGCAATTACA
CCAAGCTCGAGTTTGTACTACGATGGGATTTGTCGTTTCAGAGAGACGAAAGGTATTGTT
ATCAATACCTTTGCGGAGCTTGAACCTTTTGCTCTTCAGTCATTGTCTGATGCTAAAATT
GCTCCTCCGATTTATCCGATTCATGCTGTATTCAATTCAGACGATAATGACAAAAAACAG
GAAACAGAAAGTATTGTGGAGTGGTTAGATGATCAACCAAACTCATCTGTAGTGTTCTTG
TGCTTTGGAACCATGGGAAGTTTTGAACCTGAGCAGGTAAAGGAGATAGCAATTGCGTTA
GAGCGTAGTGGGCACCGGTTCTTGTGGTCCTTACGAAGGCCTCCACCAAAGGGGAAAATA
GAGATGCCAAGCAATTATGACAATTCGGAGGAAGTGCTGCCTGAAGGGTTCTTGGAGAGG
ACAAAAAGAATTGGGAAAGTGGTAGGATGGGCGCCACAAGTGACTGTACTTTCACATCGT
GCGGTGGGGGTATTCGTGTCACATTGTGGATGGAATTCGACAATGGAGAGCGTGTGTTGT
GGGGTGCCTATTGCTGCTTGGCCCTTGTATGCTGAACAACAGATGAATGCGTTTTTGTTG
GTTAAGGAATTGGGATTGGCAGTGGAGATTCGGATGGACTATGTCAAGGACTTCGAGGGG
AAAAATCCAGTTGATGTAGTTAGTGCTGAGGAAATTGAAGGCGCCCTACAGAAGCTTATG
GCGAATGGTGAAGAGAATGAAGTGAGAAAAAGAGTGAAGGAAATGCAAGAGAAGAGCAGA
AAAGCCATGGAAGAAGGCGGATCATCTTATACCTCTTTACGACTTCTAATTGACGATTTC
ATCAGCAACATTTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056986
PEP Infomation

pacid=37431986 transcript=PGSC0003DMT400085311 locus=PGSC0003DMG400034882 ID=PGSC0003DMT400085311.v4.03 annot-version=v4.03
Sequence

METKAELVFIPSPGLGHVASAVEFAKLVLATNERLCISLLIMKHPADFGVQSYLQSLPSL
SRLRFIDVSIDPKLVVELLSNKDRFLYDFIDGHKQKVTEFVTNNITSNNSSSSQFGSTRL
AGFVLDMFCISMIDVANEFRVPSYIFFTSAAAFLALSFHFEALRSTSKFDYSESDEELSI
LGFKNRYPAKVLPKPAKAITPSSSLYYDGICRFRETKGIVINTFAELEPFALQSLSDAKI
APPIYPIHAVFNSDDNDKKQETESIVEWLDDQPNSSVVFLCFGTMGSFEPEQVKEIAIAL
ERSGHRFLWSLRRPPPKGKIEMPSNYDNSEEVLPEGFLERTKRIGKVVGWAPQVTVLSHR
AVGVFVSHCGWNSTMESVCCGVPIAAWPLYAEQQMNAFLLVKELGLAVEIRMDYVKDFEG
KNPVDVVSAEEIEGALQKLMANGEENEVRKRVKEMQEKSRKAMEEGGSSYTSLRLLIDDF
ISNIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400085311
Transcript Infomation

pacid=37431986 locus=PGSC0003DMG400034882 ID=PGSC0003DMT400085311.v4.03 annot-version=v4.03
Sequence

ATGGAGACCAAAGCAGAGCTTGTTTTCATTCCATCGCCGGGATTGGGTCACGTCGCCTCC
GCTGTCGAATTCGCCAAACTCGTTCTTGCTACAAATGAACGACTATGCATTTCTCTTCTC
ATCATGAAACATCCTGCCGATTTTGGTGTTCAATCTTATCTCCAATCACTCCCTTCTCTG
TCCCGCTTGCGCTTTATTGATGTTTCAATAGACCCGAAACTAGTTGTTGAACTTTTGTCT
AACAAGGACAGATTCTTATACGATTTCATTGATGGTCATAAACAGAAGGTAACTGAATTT
GTTACTAACAACATTACTAGTAATAATTCCAGCTCTTCCCAATTTGGCTCTACTCGGCTT
GCTGGCTTTGTTCTTGACATGTTCTGCATTTCCATGATTGATGTAGCAAATGAATTTCGT
GTTCCTAGTTACATTTTCTTTACTTCTGCTGCTGCTTTTCTTGCATTGTCCTTTCATTTT
GAAGCTCTGAGGAGTACCTCCAAGTTTGATTATTCCGAGTCTGATGAGGAATTGTCGATT
CTCGGATTTAAAAATCGGTATCCTGCTAAAGTTTTACCTAAGCCAGCTAAGGCAATTACA
CCAAGCTCGAGTTTGTACTACGATGGGATTTGTCGTTTCAGAGAGACGAAAGGTATTGTT
ATCAATACCTTTGCGGAGCTTGAACCTTTTGCTCTTCAGTCATTGTCTGATGCTAAAATT
GCTCCTCCGATTTATCCGATTCATGCTGTATTCAATTCAGACGATAATGACAAAAAACAG
GAAACAGAAAGTATTGTGGAGTGGTTAGATGATCAACCAAACTCATCTGTAGTGTTCTTG
TGCTTTGGAACCATGGGAAGTTTTGAACCTGAGCAGGTAAAGGAGATAGCAATTGCGTTA
GAGCGTAGTGGGCACCGGTTCTTGTGGTCCTTACGAAGGCCTCCACCAAAGGGGAAAATA
GAGATGCCAAGCAATTATGACAATTCGGAGGAAGTGCTGCCTGAAGGGTTCTTGGAGAGG
ACAAAAAGAATTGGGAAAGTGGTAGGATGGGCGCCACAAGTGACTGTACTTTCACATCGT
GCGGTGGGGGTATTCGTGTCACATTGTGGATGGAATTCGACAATGGAGAGCGTGTGTTGT
GGGGTGCCTATTGCTGCTTGGCCCTTGTATGCTGAACAACAGATGAATGCGTTTTTGTTG
GTTAAGGAATTGGGATTGGCAGTGGAGATTCGGATGGACTATGTCAAGGACTTCGAGGGG
AAAAATCCAGTTGATGTAGTTAGTGCTGAGGAAATTGAAGGCGCCCTACAGAAGCTTATG
GCGAATGGTGAAGAGAATGAAGTGAGAAAAAGAGTGAAGGAAATGCAAGAGAAGAGCAGA
AAAGCCATGGAAGAAGGCGGATCATCTTATACCTCTTTACGACTTCTAATTGACGATTTC
ATCAGCAACATTTCCTGA