Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084983
CDS Infomation

pacid=37436849 polypeptide=PGSC0003DMP400056658 locus=PGSC0003DMG400034554 ID=PGSC0003DMT400084983.v4.03 annot-version=v4.03
Sequence

ATGTTGAAAACTATCACTCTTTTGCGTTCATCACTGAGCTTGCGAGCAGCTTATTCACTG
CATATCTCACCGGAAAACGCCTATGTTTCTTCAAAGGGTAAATCTTTTTACCATTCTGAA
TCGACCCTTTTAAGCTCTTCTACTTTTTTGAACAAAAATCATGATGAATTTTCAGCTGAT
GTAGAGAAAGTTTATAGAATTTTAAGAAAATTTCACTCTAGGGTTCCTAAACTTGAGCTT
GCTTTGTTAGAATCTGGTGTTGTAGCTCGTTCAGGGTTAACTGAACGTGTGTTGAATCGT
TGTGGTGATGCTGGGAATTTAGGGTATAGATTTTTTGTATGGGTGTCAAAGCAACCTGGT
TATAGGCATAGTCATGATGCTTATAAAGCAATGATAAAGATTTTAGGGAAAATGAGACAG
TTTGGTACTGTATGGGCACTTGTTGAAGAGATGAGGATAGAGAATCCTCAGTTTTTGACA
CCAGAAGTGTTTATTGTGTTGATGAGGAGATTCGCGTCGGGGAGGATGGTAAAGAAAGCA
ATTGAAGTATTGGATGAGATGCCTAAATATGGTGTTGAGCCAGATGAGTATGTTTTTGGG
TGTTTGTTGGATGCTTTGTGTAAAAATGGTAGTGTGAAAGAGGCAGCTGCATTGTTTGAT
GAAATGAGGTTTAGGTTTAGCCCTACGATTAAGCATTTTACGTCGTTGTTATATGGTTGG
TGTAAAGAAGGTAAGCTTATAGAGGCGAAAGTTGTGTTGGTGAAAATGAGGGAGGCGGGT
TTTGAGCCTGACATTGTGGTTTATAACAATTTGCTTAATGGTTATGCGGTGTCTAGGAAA
ATGGCTGATGCATTTGATCTGTTGCAGGAGATGAGAAGAAAAGGTTGCAATCCTAATGAA
ACTTCGTTTACGATAGTAATTCAGGCACTTTGTTTGCAGGACAAGATGGAGGAAGCTATG
CGGGTATTCTTGGATATGGAGAGAAGTGGATGTGAAGGTGATGTCGTAACATATACTACT
TTGATAAGTGGATTTTGTAAGTGGGGAAAGATTGAAAAGGGTTATGAACTTGTGGATACT
ATGCTGCAGAAAGGGTATAACCCGAATCAGACTACTTATTTACATATAATGTTGGCTCAT
GAGAAGAAGGAAGAGTTGGAAGAGTGTTTGGAACTTGTGAAGGAAATGGGAAAGATCGGT
ATACCTCCTGACCATAGCATCTATAATATAGTAATCCGCTTAGCGTGTAAATTGGGGGAA
ATCGATGAAGGTGTGCGAGTATGGAACCAAATAGAAGCAAATGGGATCAGTCCAGGGGTT
GACACCTTTATCATTATGATTAATGGTTTTGTTGAACAAGGGCGTCTAATAGAAGCGTGT
GATCACTTTAAAGAAATGATTGGAAGAGGTCTTCTGTCTGCTCCTCAATATGGTACTCTG
AAGGACCTATTGAATTCGCTTTTACGAGCAGAAAAACTTGAACTGTGTAAAGATGTCTGG
AGTTGCATAATGACCAAAGGATGTGAGCTTAATGTGTCTGCGTGGACCATTTGGATTCAC
GCATTGTTTTCAAATGGACATGTGAAAGAGGCTTGTGCATACTGTTTAGATATGATGGAT
GCTGGCTTGATGCCTCAGCCCGACACATTCGCCAAGCTTATGAAAGGTCTAAGGAAGCTT
TATAATAGAGAGATTGCTGCAGAGATTACAGAAAAAGCGAGGAAAATGGCTGAACAGAGA
AATATGACTTTCAAGATGTACAAGAGACGTGGTGAAAGAGACTTGAAAGAAAAAGCTAAG
ACACAAATAGATGGGAGAAAAAGGAGAGCTCGTCGACGACGTTGGGGTAGCCATCATAGT
CAGGACAAGACATTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400056658
PEP Infomation

pacid=37436849 transcript=PGSC0003DMT400084983 locus=PGSC0003DMG400034554 ID=PGSC0003DMT400084983.v4.03 annot-version=v4.03
Sequence

MLKTITLLRSSLSLRAAYSLHISPENAYVSSKGKSFYHSESTLLSSSTFLNKNHDEFSAD
VEKVYRILRKFHSRVPKLELALLESGVVARSGLTERVLNRCGDAGNLGYRFFVWVSKQPG
YRHSHDAYKAMIKILGKMRQFGTVWALVEEMRIENPQFLTPEVFIVLMRRFASGRMVKKA
IEVLDEMPKYGVEPDEYVFGCLLDALCKNGSVKEAAALFDEMRFRFSPTIKHFTSLLYGW
CKEGKLIEAKVVLVKMREAGFEPDIVVYNNLLNGYAVSRKMADAFDLLQEMRRKGCNPNE
TSFTIVIQALCLQDKMEEAMRVFLDMERSGCEGDVVTYTTLISGFCKWGKIEKGYELVDT
MLQKGYNPNQTTYLHIMLAHEKKEELEECLELVKEMGKIGIPPDHSIYNIVIRLACKLGE
IDEGVRVWNQIEANGISPGVDTFIIMINGFVEQGRLIEACDHFKEMIGRGLLSAPQYGTL
KDLLNSLLRAEKLELCKDVWSCIMTKGCELNVSAWTIWIHALFSNGHVKEACAYCLDMMD
AGLMPQPDTFAKLMKGLRKLYNREIAAEITEKARKMAEQRNMTFKMYKRRGERDLKEKAK
TQIDGRKRRARRRRWGSHHSQDKTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400084983
Transcript Infomation

pacid=37436849 locus=PGSC0003DMG400034554 ID=PGSC0003DMT400084983.v4.03 annot-version=v4.03
Sequence

ATGTTGAAAACTATCACTCTTTTGCGTTCATCACTGAGCTTGCGAGCAGCTTATTCACTG
CATATCTCACCGGAAAACGCCTATGTTTCTTCAAAGGGTAAATCTTTTTACCATTCTGAA
TCGACCCTTTTAAGCTCTTCTACTTTTTTGAACAAAAATCATGATGAATTTTCAGCTGAT
GTAGAGAAAGTTTATAGAATTTTAAGAAAATTTCACTCTAGGGTTCCTAAACTTGAGCTT
GCTTTGTTAGAATCTGGTGTTGTAGCTCGTTCAGGGTTAACTGAACGTGTGTTGAATCGT
TGTGGTGATGCTGGGAATTTAGGGTATAGATTTTTTGTATGGGTGTCAAAGCAACCTGGT
TATAGGCATAGTCATGATGCTTATAAAGCAATGATAAAGATTTTAGGGAAAATGAGACAG
TTTGGTACTGTATGGGCACTTGTTGAAGAGATGAGGATAGAGAATCCTCAGTTTTTGACA
CCAGAAGTGTTTATTGTGTTGATGAGGAGATTCGCGTCGGGGAGGATGGTAAAGAAAGCA
ATTGAAGTATTGGATGAGATGCCTAAATATGGTGTTGAGCCAGATGAGTATGTTTTTGGG
TGTTTGTTGGATGCTTTGTGTAAAAATGGTAGTGTGAAAGAGGCAGCTGCATTGTTTGAT
GAAATGAGGTTTAGGTTTAGCCCTACGATTAAGCATTTTACGTCGTTGTTATATGGTTGG
TGTAAAGAAGGTAAGCTTATAGAGGCGAAAGTTGTGTTGGTGAAAATGAGGGAGGCGGGT
TTTGAGCCTGACATTGTGGTTTATAACAATTTGCTTAATGGTTATGCGGTGTCTAGGAAA
ATGGCTGATGCATTTGATCTGTTGCAGGAGATGAGAAGAAAAGGTTGCAATCCTAATGAA
ACTTCGTTTACGATAGTAATTCAGGCACTTTGTTTGCAGGACAAGATGGAGGAAGCTATG
CGGGTATTCTTGGATATGGAGAGAAGTGGATGTGAAGGTGATGTCGTAACATATACTACT
TTGATAAGTGGATTTTGTAAGTGGGGAAAGATTGAAAAGGGTTATGAACTTGTGGATACT
ATGCTGCAGAAAGGGTATAACCCGAATCAGACTACTTATTTACATATAATGTTGGCTCAT
GAGAAGAAGGAAGAGTTGGAAGAGTGTTTGGAACTTGTGAAGGAAATGGGAAAGATCGGT
ATACCTCCTGACCATAGCATCTATAATATAGTAATCCGCTTAGCGTGTAAATTGGGGGAA
ATCGATGAAGGTGTGCGAGTATGGAACCAAATAGAAGCAAATGGGATCAGTCCAGGGGTT
GACACCTTTATCATTATGATTAATGGTTTTGTTGAACAAGGGCGTCTAATAGAAGCGTGT
GATCACTTTAAAGAAATGATTGGAAGAGGTCTTCTGTCTGCTCCTCAATATGGTACTCTG
AAGGACCTATTGAATTCGCTTTTACGAGCAGAAAAACTTGAACTGTGTAAAGATGTCTGG
AGTTGCATAATGACCAAAGGATGTGAGCTTAATGTGTCTGCGTGGACCATTTGGATTCAC
GCATTGTTTTCAAATGGACATGTGAAAGAGGCTTGTGCATACTGTTTAGATATGATGGAT
GCTGGCTTGATGCCTCAGCCCGACACATTCGCCAAGCTTATGAAAGGTCTAAGGAAGCTT
TATAATAGAGAGATTGCTGCAGAGATTACAGAAAAAGCGAGGAAAATGGCTGAACAGAGA
AATATGACTTTCAAGATGTACAAGAGACGTGGTGAAAGAGACTTGAAAGAAAAAGCTAAG
ACACAAATAGATGGGAGAAAAAGGAGAGCTCGTCGACGACGTTGGGGTAGCCATCATAGT
CAGGACAAGACATTGTAA