Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084876
CDS Infomation

pacid=37457733 polypeptide=PGSC0003DMP400056551 locus=PGSC0003DMG400034447 ID=PGSC0003DMT400084876.v4.03 annot-version=v4.03
Sequence

ATGGGACATGTTGTGGACATAGGGAAGCCAGTGAATTACACAGGGGGGCTCGAGTTCTCG
AGCCTAACATACAGAGTGACAAAAAAGATCAAAGATGAAAATGGGAAATGGTTAAGTCAA
GAAGTGGACTTGTTGCACCAGATAACAGGTTATGCACCAAAAGGTTGCATTACTGCAGTT
ATGGGCCCAAGTGGTGCTGGAAAGTCTACACTTTTAGATGGATTGGCTGGAAGAATTGCT
AGTGGAAGCCTTAGGGGTAAAGTGTCAATGGGTGGGCTTGATATGAGCCCAAGTTTGATC
AAAGGAAGTTCAGCTTATATAATGCAAGATGATAGACTTTTTCCAATGCTTACTGTTTAT
GAGACATTCATGTTTGCTGCTGATTTTAGATTAGGATCACTCTCTAGGACCGAAAAACAG
GAGAAGGTTGAGAGGCTGATCGAGCAACTTGGATTGTCTTCGACTAGGAACACTTACATA
GGTGATGAAGGGACTCGAGGAGTATCTGGAGGTGAACGTCGTAGGGTGTCAATTGGAGTG
GACATTATACATGGACCTTCATTGTTGTTCTTGGATGAGCCTACTTCAGGTCTTGATTCA
ACTAGTGCTCATAGTGTAATTGAGAAGGTGCACGATATAGCCCGAGCTGGAAGCACTGTG
ATTCTAACAATTCATCAGCCTTCACACCGTATTCAATTGCTTATTGATCATCTAATCATC
CTGGCTCGCGGACAGCTCATGTACCAAGGAGCACCGAATGATGTGTCTCATCATCTTGTT
AGGATGGGACGAAAAGTGCCAAAGAACGAAAGCTCGATAGAACACCTGATTGATGTAATT
CAGCAATATGATCAATCTGAGCTTGGAGTAGAAGCAGTAGCTGCATTTGCACTTACTGGT
ATGAAACCTCCACCAATCAGTGCAGCAGCACACGAGATGTCAGCTTCCACTGTGCTTCCA
TCACCTGTCCGTCCATCACACCGTGCTAAACATCAGGTCGTGGAGGCACAAGGTCGTGAC
AAGTCAAGCAAACGTCTTCGTTTGCAAACCCATGCACAAGATGACACAGGATTCGATCAC
AGCGTTAGGAGTCCCTGGAATACATCTAAGTCCTGGAGTGCCAGCCGTAGTGGTGTCCTA
CAATCTATAGGCTTTTCACCAGCTAGGCGCAATGATCATAGAAGTCCAAGTGTTATGGGT
TCTTCTCCAGGATGCTATGCCTACTCTACAGAGATCGTTCAAAGTACTCCAACTCCGCAT
AGTAGTGACTACACTGTTAATGAAAATGACTATTTGACACCCAATGATTTTGCTCATGAC
ATCAATCATTCTTTCCATGATCTTGGGCCAAAGTTTGCGAATTCTTTCTTCTCAGAGACA
TGGATATTGATGAGACGAAACTTTATAAACATCATGCGTACCCCTGAACTTTTCCTCTCT
AGGCTTGTAGTACTATCAGCCATGGGAATTATGATGGCTACTATGTTTCTGCATCCCAAA
GAAAACCTTCAAGGGATCACAAATCGCCTCAGTTTCTTCATCTTCACTTGCACCCTCTTT
TTCTTTTCGTCTAATGATGCTGTTCCTGCTTTCATTCAAGAACGATTTGTCTTCATCCGC
GAGACCTCTCACAATAAGTATAGAGCCTCTTCTTACACAATTGCAGGTCTAGTTACTTAC
CTTCCATTCCTAGCTCTTCAGGCTGCAGTTTATGCAGTGATTGTTTGGTTTGCACTATCA
CTTAGAGGGCCATTCATCTATTTCTTGGTAATTCTGTTCATGTCACTACTCTCCACAAAT
TCATTCGTTATATTCGTGAGCTCAGTGGTGCCAAACTACATACTAGGATATGCAGCTGTG
ATTGCTTTCACCGCGCTGTTTTTCTTGTTCTGTGGCTATTTCTTGAACAGCAATGACATG
CCAAATTACTGGAAATGGATGAATTATGTTTCAACAATGACTTATCCATATGAAGGACTT
TTGATGAATCAGTATCAAACAAATGAATCATTTGGAAAAGACCCTCTTGGAAGAGATGTT
ACTGGTTTTGGAATCTTGAAATCACTTAATATTTCACTTGATCCAACCAAGAAGTGGGAA
AAAGTATATATAATGTTAGGATGGGCTGTTTTTTACAGGATTCTGTTTTATATTGCTCTT
AGATTATTTTCAAAGAATCAGAGGAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400056551
PEP Infomation

pacid=37457733 transcript=PGSC0003DMT400084876 locus=PGSC0003DMG400034447 ID=PGSC0003DMT400084876.v4.03 annot-version=v4.03
Sequence

MGHVVDIGKPVNYTGGLEFSSLTYRVTKKIKDENGKWLSQEVDLLHQITGYAPKGCITAV
MGPSGAGKSTLLDGLAGRIASGSLRGKVSMGGLDMSPSLIKGSSAYIMQDDRLFPMLTVY
ETFMFAADFRLGSLSRTEKQEKVERLIEQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGV
DIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARAGSTVILTIHQPSHRIQLLIDHLII
LARGQLMYQGAPNDVSHHLVRMGRKVPKNESSIEHLIDVIQQYDQSELGVEAVAAFALTG
MKPPPISAAAHEMSASTVLPSPVRPSHRAKHQVVEAQGRDKSSKRLRLQTHAQDDTGFDH
SVRSPWNTSKSWSASRSGVLQSIGFSPARRNDHRSPSVMGSSPGCYAYSTEIVQSTPTPH
SSDYTVNENDYLTPNDFAHDINHSFHDLGPKFANSFFSETWILMRRNFINIMRTPELFLS
RLVVLSAMGIMMATMFLHPKENLQGITNRLSFFIFTCTLFFFSSNDAVPAFIQERFVFIR
ETSHNKYRASSYTIAGLVTYLPFLALQAAVYAVIVWFALSLRGPFIYFLVILFMSLLSTN
SFVIFVSSVVPNYILGYAAVIAFTALFFLFCGYFLNSNDMPNYWKWMNYVSTMTYPYEGL
LMNQYQTNESFGKDPLGRDVTGFGILKSLNISLDPTKKWEKVYIMLGWAVFYRILFYIAL
RLFSKNQRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400084876
Transcript Infomation

pacid=37457733 locus=PGSC0003DMG400034447 ID=PGSC0003DMT400084876.v4.03 annot-version=v4.03
Sequence

ATGGGACATGTTGTGGACATAGGGAAGCCAGTGAATTACACAGGGGGGCTCGAGTTCTCG
AGCCTAACATACAGAGTGACAAAAAAGATCAAAGATGAAAATGGGAAATGGTTAAGTCAA
GAAGTGGACTTGTTGCACCAGATAACAGGTTATGCACCAAAAGGTTGCATTACTGCAGTT
ATGGGCCCAAGTGGTGCTGGAAAGTCTACACTTTTAGATGGATTGGCTGGAAGAATTGCT
AGTGGAAGCCTTAGGGGTAAAGTGTCAATGGGTGGGCTTGATATGAGCCCAAGTTTGATC
AAAGGAAGTTCAGCTTATATAATGCAAGATGATAGACTTTTTCCAATGCTTACTGTTTAT
GAGACATTCATGTTTGCTGCTGATTTTAGATTAGGATCACTCTCTAGGACCGAAAAACAG
GAGAAGGTTGAGAGGCTGATCGAGCAACTTGGATTGTCTTCGACTAGGAACACTTACATA
GGTGATGAAGGGACTCGAGGAGTATCTGGAGGTGAACGTCGTAGGGTGTCAATTGGAGTG
GACATTATACATGGACCTTCATTGTTGTTCTTGGATGAGCCTACTTCAGGTCTTGATTCA
ACTAGTGCTCATAGTGTAATTGAGAAGGTGCACGATATAGCCCGAGCTGGAAGCACTGTG
ATTCTAACAATTCATCAGCCTTCACACCGTATTCAATTGCTTATTGATCATCTAATCATC
CTGGCTCGCGGACAGCTCATGTACCAAGGAGCACCGAATGATGTGTCTCATCATCTTGTT
AGGATGGGACGAAAAGTGCCAAAGAACGAAAGCTCGATAGAACACCTGATTGATGTAATT
CAGCAATATGATCAATCTGAGCTTGGAGTAGAAGCAGTAGCTGCATTTGCACTTACTGGT
ATGAAACCTCCACCAATCAGTGCAGCAGCACACGAGATGTCAGCTTCCACTGTGCTTCCA
TCACCTGTCCGTCCATCACACCGTGCTAAACATCAGGTCGTGGAGGCACAAGGTCGTGAC
AAGTCAAGCAAACGTCTTCGTTTGCAAACCCATGCACAAGATGACACAGGATTCGATCAC
AGCGTTAGGAGTCCCTGGAATACATCTAAGTCCTGGAGTGCCAGCCGTAGTGGTGTCCTA
CAATCTATAGGCTTTTCACCAGCTAGGCGCAATGATCATAGAAGTCCAAGTGTTATGGGT
TCTTCTCCAGGATGCTATGCCTACTCTACAGAGATCGTTCAAAGTACTCCAACTCCGCAT
AGTAGTGACTACACTGTTAATGAAAATGACTATTTGACACCCAATGATTTTGCTCATGAC
ATCAATCATTCTTTCCATGATCTTGGGCCAAAGTTTGCGAATTCTTTCTTCTCAGAGACA
TGGATATTGATGAGACGAAACTTTATAAACATCATGCGTACCCCTGAACTTTTCCTCTCT
AGGCTTGTAGTACTATCAGCCATGGGAATTATGATGGCTACTATGTTTCTGCATCCCAAA
GAAAACCTTCAAGGGATCACAAATCGCCTCAGTTTCTTCATCTTCACTTGCACCCTCTTT
TTCTTTTCGTCTAATGATGCTGTTCCTGCTTTCATTCAAGAACGATTTGTCTTCATCCGC
GAGACCTCTCACAATAAGTATAGAGCCTCTTCTTACACAATTGCAGGTCTAGTTACTTAC
CTTCCATTCCTAGCTCTTCAGGCTGCAGTTTATGCAGTGATTGTTTGGTTTGCACTATCA
CTTAGAGGGCCATTCATCTATTTCTTGGTAATTCTGTTCATGTCACTACTCTCCACAAAT
TCATTCGTTATATTCGTGAGCTCAGTGGTGCCAAACTACATACTAGGATATGCAGCTGTG
ATTGCTTTCACCGCGCTGTTTTTCTTGTTCTGTGGCTATTTCTTGAACAGCAATGACATG
CCAAATTACTGGAAATGGATGAATTATGTTTCAACAATGACTTATCCATATGAAGGACTT
TTGATGAATCAGTATCAAACAAATGAATCATTTGGAAAAGACCCTCTTGGAAGAGATGTT
ACTGGTTTTGGAATCTTGAAATCACTTAATATTTCACTTGATCCAACCAAGAAGTGGGAA
AAAGTATATATAATGTTAGGATGGGCTGTTTTTTACAGGATTCTGTTTTATATTGCTCTT
AGATTATTTTCAAAGAATCAGAGGAAATGA