Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084493
CDS Infomation

pacid=37462162 polypeptide=PGSC0003DMP400056361 locus=PGSC0003DMG400034096 ID=PGSC0003DMT400084493.v4.03 annot-version=v4.03
Sequence

ATGCCAGGTAGGAAGCATGTATCAAGAAGATCGAAGTGTTCAAAAGGTGAAGGTGCTCCA
AATGCAAAAAACATCTCTGAGAGCAGTGATTCAGATATTAGACCCGTAAATGATATCACT
TCTAATGAGCGCTCTTCATCTCCATCAAAAAGCAAATCTGACAATAAAGATGGCAGCAAC
AAAAGGAACAGCAAGCGAATAGCTGAACATGTTCTAGTTGCCATTAAGAAAAGACAGAAG
AAAATGGCAGTATTAGAATCTGACTCTGTTGCAAGTGAAAGCCTAGGTTTCAAAGATTTG
AATCTTCACTCTATTTCACGGAAGGAAAACGAAGATGCGAGTCCATCTTCACAAAAAGCA
CAATGTCATAGTGCTAAAAGGTCTAGGAAGAAAAACTCTCCGGTTTTGGACAATAAAAAT
TCTTTGCAAGGCAAGGCTTTTGGTTGCAAATTGATGGAAGTTTCCAGTGCAAAGCCTGTG
ACAAATTGTGATGACACATTGGGGAAAAATGAATATGTGGGTGAGAATAACTGCAAACAA
GAAATAGATGGTACTAAATCTTGGAGACCCATTGAAAAGGCTCTCTTTGAAAAGGGTCTA
GAAATGTTCGGTAGAAGCAGCTGTTTGATCGCTCGAAACCTCATGAATGGTTTGAAGACA
TGCTGGGAGGTTTTCCAGTACATGAACAATTCCGGGAATAAGCTATTCTCAGGCACAGGT
GATGGGATGGATGGCATTCTTGAAGGTGGTTCCAATGGTGATGGTCAGGAAATCATGGGT
AATGAACCTCGAAGAAGATCCAGATTTTTGCGTAGAAGAGGCAAAGTTCGCCGATTAAAA
TACACGTGGAAATCCACTGGATACCATGCAATTAGGAAACGGATTTCTGAGAGGAAGGAT
CAACCCTGTCGGCAGTTTAATCCATGTGGCTGTCAAGGCCCTTGTGGAAAGGAGTGTTCC
TGCATTGTAAATGGGACCTGCTGTGAAAAATACTGTGGATGCCCAAAGGGTTGCAAGAAC
AGGTTTCGTGGTTGTCATTGTGCCAAAAGTCAGTGTAGGAGCCGTCAATGCCCTTGCTTT
GCTGCTGGCAGGGAATGTGATCCTGATGTTTGTCGAAATTGTTGGATCAGTTGTGGTGAT
GGTACGCTTGGGGTTCCTCTGCAAAGAGGTGATAGTCATGAATGCAGGAATATGAAACTA
CTTCTCAAACAGCAACAAAAGGTACTTCTTGGAAGATCTGATGTTTCTGGCTGGGGGGCT
TTCTTGAAGAATACTGTTGGAAAACATGAATACCTTGGGGAGTACACAGGTGAATTAATT
TCACACCGTGAAGCTGACAAGCGTGGCAAGATTTATGATCGTGAAAATTCTTCATTTCTC
TTCAATCTTAATGATCAGTTTGTGCTTGATGCACACCGGAAGGGTGACAAACTAAAATTT
GCGAACCATTCTCCTGTTCCAAATTGCTATGCTAAGGTCATGATGGTGGCTGGAGATCAC
AGAGTTGGTATCTTTGCCAATGAAAGAATTTGCGCTGGAGAAGAACTCTTTTACGATTAT
CGTTATGAGCCAGACAGTGCACCCGCCTGGGCAAGGAAGCCCGAGGCATCTGGTACTAGG
AAAGAGGATGCTGCTCCTTCAAGTGGTCGTGCTAGGAAGCATACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400056361
PEP Infomation

pacid=37462162 transcript=PGSC0003DMT400084493 locus=PGSC0003DMG400034096 ID=PGSC0003DMT400084493.v4.03 annot-version=v4.03
Sequence

MPGRKHVSRRSKCSKGEGAPNAKNISESSDSDIRPVNDITSNERSSSPSKSKSDNKDGSN
KRNSKRIAEHVLVAIKKRQKKMAVLESDSVASESLGFKDLNLHSISRKENEDASPSSQKA
QCHSAKRSRKKNSPVLDNKNSLQGKAFGCKLMEVSSAKPVTNCDDTLGKNEYVGENNCKQ
EIDGTKSWRPIEKALFEKGLEMFGRSSCLIARNLMNGLKTCWEVFQYMNNSGNKLFSGTG
DGMDGILEGGSNGDGQEIMGNEPRRRSRFLRRRGKVRRLKYTWKSTGYHAIRKRISERKD
QPCRQFNPCGCQGPCGKECSCIVNGTCCEKYCGCPKGCKNRFRGCHCAKSQCRSRQCPCF
AAGRECDPDVCRNCWISCGDGTLGVPLQRGDSHECRNMKLLLKQQQKVLLGRSDVSGWGA
FLKNTVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAHRKGDKLKF
ANHSPVPNCYAKVMMVAGDHRVGIFANERICAGEELFYDYRYEPDSAPAWARKPEASGTR
KEDAAPSSGRARKHT*

Transcript Sequence

Transcript ID

PGSC0003DMT400084493
Transcript Infomation

pacid=37462162 locus=PGSC0003DMG400034096 ID=PGSC0003DMT400084493.v4.03 annot-version=v4.03
Sequence

ATGCCAGGTAGGAAGCATGTATCAAGAAGATCGAAGTGTTCAAAAGGTGAAGGTGCTCCA
AATGCAAAAAACATCTCTGAGAGCAGTGATTCAGATATTAGACCCGTAAATGATATCACT
TCTAATGAGCGCTCTTCATCTCCATCAAAAAGCAAATCTGACAATAAAGATGGCAGCAAC
AAAAGGAACAGCAAGCGAATAGCTGAACATGTTCTAGTTGCCATTAAGAAAAGACAGAAG
AAAATGGCAGTATTAGAATCTGACTCTGTTGCAAGTGAAAGCCTAGGTTTCAAAGATTTG
AATCTTCACTCTATTTCACGGAAGGAAAACGAAGATGCGAGTCCATCTTCACAAAAAGCA
CAATGTCATAGTGCTAAAAGGTCTAGGAAGAAAAACTCTCCGGTTTTGGACAATAAAAAT
TCTTTGCAAGGCAAGGCTTTTGGTTGCAAATTGATGGAAGTTTCCAGTGCAAAGCCTGTG
ACAAATTGTGATGACACATTGGGGAAAAATGAATATGTGGGTGAGAATAACTGCAAACAA
GAAATAGATGGTACTAAATCTTGGAGACCCATTGAAAAGGCTCTCTTTGAAAAGGGTCTA
GAAATGTTCGGTAGAAGCAGCTGTTTGATCGCTCGAAACCTCATGAATGGTTTGAAGACA
TGCTGGGAGGTTTTCCAGTACATGAACAATTCCGGGAATAAGCTATTCTCAGGCACAGGT
GATGGGATGGATGGCATTCTTGAAGGTGGTTCCAATGGTGATGGTCAGGAAATCATGGGT
AATGAACCTCGAAGAAGATCCAGATTTTTGCGTAGAAGAGGCAAAGTTCGCCGATTAAAA
TACACGTGGAAATCCACTGGATACCATGCAATTAGGAAACGGATTTCTGAGAGGAAGGAT
CAACCCTGTCGGCAGTTTAATCCATGTGGCTGTCAAGGCCCTTGTGGAAAGGAGTGTTCC
TGCATTGTAAATGGGACCTGCTGTGAAAAATACTGTGGATGCCCAAAGGGTTGCAAGAAC
AGGTTTCGTGGTTGTCATTGTGCCAAAAGTCAGTGTAGGAGCCGTCAATGCCCTTGCTTT
GCTGCTGGCAGGGAATGTGATCCTGATGTTTGTCGAAATTGTTGGATCAGTTGTGGTGAT
GGTACGCTTGGGGTTCCTCTGCAAAGAGGTGATAGTCATGAATGCAGGAATATGAAACTA
CTTCTCAAACAGCAACAAAAGGTACTTCTTGGAAGATCTGATGTTTCTGGCTGGGGGGCT
TTCTTGAAGAATACTGTTGGAAAACATGAATACCTTGGGGAGTACACAGGTGAATTAATT
TCACACCGTGAAGCTGACAAGCGTGGCAAGATTTATGATCGTGAAAATTCTTCATTTCTC
TTCAATCTTAATGATCAGTTTGTGCTTGATGCACACCGGAAGGGTGACAAACTAAAATTT
GCGAACCATTCTCCTGTTCCAAATTGCTATGCTAAGGTCATGATGGTGGCTGGAGATCAC
AGAGTTGGTATCTTTGCCAATGAAAGAATTTGCGCTGGAGAAGAACTCTTTTACGATTAT
CGTTATGAGCCAGACAGTGCACCCGCCTGGGCAAGGAAGCCCGAGGCATCTGGTACTAGG
AAAGAGGATGCTGCTCCTTCAAGTGGTCGTGCTAGGAAGCATACATAA