Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084311
CDS Infomation

pacid=37463517 polypeptide=PGSC0003DMP400056333 locus=PGSC0003DMG400033929 ID=PGSC0003DMT400084311.v4.03 annot-version=v4.03
Sequence

ATGGAGATACAAAATGGTAGCAGCAAGTCAAAGATAGATGATTATCAAGTGATAGAGCAA
ATTGGAAGAGGAGCTTTTGGAACAGCATTTCTTGTTCTTCATACCACTGACAACAACAAG
TATGTTCTGAAGAAGATACCTTTAGCAAAGCAGACAGACAAGTTCAAGCGTACTGCACTT
CAAGAGATGGATCTGATAGCTAAGTTAAGCCATCCATATATCGTGGAGTACAAGGATGCT
TGGGTCGAGAAGGGGAACTGGATATGCATCGTTACCAACTATTGTGAAGGTGGAGATATG
GCAAAAATCATAAGGAAGTCTAGAGGAGCTCTCTTCCCAGAAGAGAAACTCTGCAAATGG
CTGACTCAGCTATTACTGGCGGTAGATTATCTGCACTCCAACCGTGTTCTACACAGGGAC
GTGAAGTTATCTAACATTTTTGTCACAAAGGACAATGACATCCGGCTAGGTGATTTTGGA
TTCGCAAAACTTTTAGATGGAGAAGGCCTTGCTTCCTTGGTTGTTGGTACTCCAAACTAT
ATGTGTCCTGAGCTCCTTGCTGATATACCATATGGCTACAAATCTGACATATGGTCTCTT
GGATGCTGTATGTTTGAGATTGCTGCACACCAGGCACCATTTAGAGCTCCAGACATGACA
GGACTTATCAATAAAATAAACAGGGGCTCTTTATCACCACTTCCAATTATATATTCCTCC
AACTTGAAACAGATTATTAAAAGCATGCTAAGGAAAAGCCCTGAACACAGACCAACAACT
GCGGAGTTGTTAAGGCATCAACATTTGCAGCCATACCTCCTTCGCTGCCGCAACCCTTCA
TCTGCTTTTCTTCCAGTGAAGTCTCCAAACAGCCCAAAGGAAAAAACAAAGCAATCACCT
GGAAAATCTGGCAGTCCTAGATTCATAAGAGACAGACCTCTAAGGCTAAAAGAGAAGAGT
CCTGTTTTTCACTTTGATGGAAGTGACAAATTTCTTGGGCTTAAAGAGAAGGGTCCTGTT
TTTCACTTTGATGAAAGGGACAACATTCGGCCAGGAAATTTATCTGATAACTATGACACA
TTTAAAGCCAAACTTGAGACTAAGAGAGTTGATCCTACTAGCTACTCAGCAAAGATATTT
GTAGATGGTGTGGATTCTAAATGTTGGGATGCTAGTGAGGCAGCTATTTGCAATGGAGGC
GATCAATCCGACCCTCTATTGCAAGAAGGAAGTACAAATACACCAAACTCTTCAAGATTC
ATGGCAAATACGCACTCTGAGGAACAAGAGAAAGTATCTGTTGAGCATGTTCCACAATCT
GAAGAAGGTGACGGGGAGAATGACAAAACAAAAGACCTTGAGGAGTTGAGCACGCCAAGT
GGCAGTGGAGAAGCAGACTTGAATGAACTAGATTGTACCTCCGCAAAGCCTAGCAGAATG
ATTTCATCTAGTGGAAGCTCCACTGAGAAAACACGGTCTTATGATGAAGAAAGCACTTCA
TCAACTACACGACCTGGAAAATCTGATACAGATGCTGAACTAAGGTGTCATGCATCTGAA
AGTGAAAATGTTGGCGAGTTTAAAGAAGTTTCTGTTGACCGCATAGCTTCTGAAAGAAAT
AGGTCAAGCCCACTTAAAGATGAGATAGAAAAGAATGCAAATATGGTTGAAGATGCTAAA
CGTCAAGCACTAGATGATAGGGTTTCACTGCTTAAGGCACTAGCTGCCTTAGCTGGTGAC
GGGCACAAGAACGACTGGGAAAATCCGACTCAAGAAAGAGCTGAAGCTCTGGAATCCCTT
TTAGAGGTTTGTGCACGACTACTCAAGCAGGAAAAAATTGATGAGCTTGCTGGTGTGCTG
AAACCATTTGGCGATGATGCAGTTTCATCCAGAGAAACGGCAATATGGTTGACTAAGAGC
CTCATGAGTGCACAAAAATTGGCCAAGGGATCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056333
PEP Infomation

pacid=37463517 transcript=PGSC0003DMT400084311 locus=PGSC0003DMG400033929 ID=PGSC0003DMT400084311.v4.03 annot-version=v4.03
Sequence

MEIQNGSSKSKIDDYQVIEQIGRGAFGTAFLVLHTTDNNKYVLKKIPLAKQTDKFKRTAL
QEMDLIAKLSHPYIVEYKDAWVEKGNWICIVTNYCEGGDMAKIIRKSRGALFPEEKLCKW
LTQLLLAVDYLHSNRVLHRDVKLSNIFVTKDNDIRLGDFGFAKLLDGEGLASLVVGTPNY
MCPELLADIPYGYKSDIWSLGCCMFEIAAHQAPFRAPDMTGLINKINRGSLSPLPIIYSS
NLKQIIKSMLRKSPEHRPTTAELLRHQHLQPYLLRCRNPSSAFLPVKSPNSPKEKTKQSP
GKSGSPRFIRDRPLRLKEKSPVFHFDGSDKFLGLKEKGPVFHFDERDNIRPGNLSDNYDT
FKAKLETKRVDPTSYSAKIFVDGVDSKCWDASEAAICNGGDQSDPLLQEGSTNTPNSSRF
MANTHSEEQEKVSVEHVPQSEEGDGENDKTKDLEELSTPSGSGEADLNELDCTSAKPSRM
ISSSGSSTEKTRSYDEESTSSTTRPGKSDTDAELRCHASESENVGEFKEVSVDRIASERN
RSSPLKDEIEKNANMVEDAKRQALDDRVSLLKALAALAGDGHKNDWENPTQERAEALESL
LEVCARLLKQEKIDELAGVLKPFGDDAVSSRETAIWLTKSLMSAQKLAKGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400084311
Transcript Infomation

pacid=37463517 locus=PGSC0003DMG400033929 ID=PGSC0003DMT400084311.v4.03 annot-version=v4.03
Sequence

ATGGAGATACAAAATGGTAGCAGCAAGTCAAAGATAGATGATTATCAAGTGATAGAGCAA
ATTGGAAGAGGAGCTTTTGGAACAGCATTTCTTGTTCTTCATACCACTGACAACAACAAG
TATGTTCTGAAGAAGATACCTTTAGCAAAGCAGACAGACAAGTTCAAGCGTACTGCACTT
CAAGAGATGGATCTGATAGCTAAGTTAAGCCATCCATATATCGTGGAGTACAAGGATGCT
TGGGTCGAGAAGGGGAACTGGATATGCATCGTTACCAACTATTGTGAAGGTGGAGATATG
GCAAAAATCATAAGGAAGTCTAGAGGAGCTCTCTTCCCAGAAGAGAAACTCTGCAAATGG
CTGACTCAGCTATTACTGGCGGTAGATTATCTGCACTCCAACCGTGTTCTACACAGGGAC
GTGAAGTTATCTAACATTTTTGTCACAAAGGACAATGACATCCGGCTAGGTGATTTTGGA
TTCGCAAAACTTTTAGATGGAGAAGGCCTTGCTTCCTTGGTTGTTGGTACTCCAAACTAT
ATGTGTCCTGAGCTCCTTGCTGATATACCATATGGCTACAAATCTGACATATGGTCTCTT
GGATGCTGTATGTTTGAGATTGCTGCACACCAGGCACCATTTAGAGCTCCAGACATGACA
GGACTTATCAATAAAATAAACAGGGGCTCTTTATCACCACTTCCAATTATATATTCCTCC
AACTTGAAACAGATTATTAAAAGCATGCTAAGGAAAAGCCCTGAACACAGACCAACAACT
GCGGAGTTGTTAAGGCATCAACATTTGCAGCCATACCTCCTTCGCTGCCGCAACCCTTCA
TCTGCTTTTCTTCCAGTGAAGTCTCCAAACAGCCCAAAGGAAAAAACAAAGCAATCACCT
GGAAAATCTGGCAGTCCTAGATTCATAAGAGACAGACCTCTAAGGCTAAAAGAGAAGAGT
CCTGTTTTTCACTTTGATGGAAGTGACAAATTTCTTGGGCTTAAAGAGAAGGGTCCTGTT
TTTCACTTTGATGAAAGGGACAACATTCGGCCAGGAAATTTATCTGATAACTATGACACA
TTTAAAGCCAAACTTGAGACTAAGAGAGTTGATCCTACTAGCTACTCAGCAAAGATATTT
GTAGATGGTGTGGATTCTAAATGTTGGGATGCTAGTGAGGCAGCTATTTGCAATGGAGGC
GATCAATCCGACCCTCTATTGCAAGAAGGAAGTACAAATACACCAAACTCTTCAAGATTC
ATGGCAAATACGCACTCTGAGGAACAAGAGAAAGTATCTGTTGAGCATGTTCCACAATCT
GAAGAAGGTGACGGGGAGAATGACAAAACAAAAGACCTTGAGGAGTTGAGCACGCCAAGT
GGCAGTGGAGAAGCAGACTTGAATGAACTAGATTGTACCTCCGCAAAGCCTAGCAGAATG
ATTTCATCTAGTGGAAGCTCCACTGAGAAAACACGGTCTTATGATGAAGAAAGCACTTCA
TCAACTACACGACCTGGAAAATCTGATACAGATGCTGAACTAAGGTGTCATGCATCTGAA
AGTGAAAATGTTGGCGAGTTTAAAGAAGTTTCTGTTGACCGCATAGCTTCTGAAAGAAAT
AGGTCAAGCCCACTTAAAGATGAGATAGAAAAGAATGCAAATATGGTTGAAGATGCTAAA
CGTCAAGCACTAGATGATAGGGTTTCACTGCTTAAGGCACTAGCTGCCTTAGCTGGTGAC
GGGCACAAGAACGACTGGGAAAATCCGACTCAAGAAAGAGCTGAAGCTCTGGAATCCCTT
TTAGAGGTTTGTGCACGACTACTCAAGCAGGAAAAAATTGATGAGCTTGCTGGTGTGCTG
AAACCATTTGGCGATGATGCAGTTTCATCCAGAGAAACGGCAATATGGTTGACTAAGAGC
CTCATGAGTGCACAAAAATTGGCCAAGGGATCGTGA