Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084308
CDS Infomation

pacid=37459674 polypeptide=PGSC0003DMP400056330 locus=PGSC0003DMG400033928 ID=PGSC0003DMT400084308.v4.03 annot-version=v4.03
Sequence

ATGGAAACTTTGTGCTCAAATATTAATGCTGGATCATCAATCTCTAAATCATTATTTTGC
TATAGATTTCCATCCATAACACATAAAAGAGGGGTTGCTTGTGGGAGAAAGGAGCTTCCT
ATGAAAAAGCTGGGAGAGAATGATCAAAATTTGATGAAATGGATAGGGAAAGGAGTTATT
GGATTAGCTGCTGCTACTGCTTTGTCCTTCTCCTCTTATTCTCCAGCTTTCGCTCACTCT
TTAACTGTAGCATTCCCCGTCTCTCACACACCTGAGGTAAACACAGTTCAGAGGACCTTA
ATTGAGGCTTGGAGTTTGATTAGAGAGACATTCGTAGATCCAACTTTCAATCATCAAGAT
TGGGATTTGAAACTGCAACAAACCATGGTAGAAATGTTTCCATTGAGGTCAGAAGATGCT
GCCTATAGCAAAGTAAGGGGAATGCTATCTACGCTTGGAGATCCCTATACACGCATTATT
AGTCCTAAGGAGTACCAAAGTTTTAGAATAGGAAGTGATGGAAATTTACAAGGTGTTGGA
CTCTTTGTCAGTGTTCAACCAAATACAGGCCACCTGGTTGTTTTGTCCTGTGTGGAGAAT
AGCCCAGCTGCACGTGCTGGCATTCATGAAGGAGATGAATTGCTTGAGATAAATGGTGAG
AGGCTTGATGGAGTTGACAGTGAAACAGCAGCTCAAAAACTGAGGGGCCGTGCTGGTACA
ACTGTTACAGTCAAAGTTCACAGAGGTAATGGTGCAGGAGTATCCAGTTATCAAGAGGTT
AAACTACCTCGCGAAGTGATTAAGCTTTCACCAGTATCCAGTGCCATCATCCCTCATAAA
ATGCCTGATGGTCGTCTCTTGAAAACTGGATATGTAAAGTTGTCAAGCTTCTCTCAGTCT
GCTGCTATGGAAATGGAAAACACAATTCAGGATATGGAAAATCAGGGTGTGCAATCATAT
ATATTAGATCTTCGGAATAATCCTGGAGGTCTCGTTACGGCTGGGTTAGATGTTGCCCAG
ATATGGCTAGATGGCGATGAGACACTTGTGAACACTGTTGATAGGGATGGAAACATGGCA
CCAATTAGCATGGTCAATGGACATGCTGTAACACACGATCCACTTGTCGTCCTTGTGAAT
GAGGGAAGTGCAAGTGCTAGTGAGATTCTGGCCGGGGCACTCCATGATAATGGTCGTGCA
ATCCTTGTCGGGCATAAGACTTTCGGGAAAGGAAAGATACAGAGTGTTACACAGTTGCAC
GATGGATCGGCTCTATTTGTTACAGTAGCCAAGTATTTGTCTCCAGCACTTCATGACATC
GATCAAGTGGGAATAACACCTGATGTTCAGTGTACAGTTGAGATGCTTAATTCAGCCAAA
GACACCTTTAAGGAAAGGAAAACATCCTCATCATCTTTGGAGGCTGATTCTTGCATCATG
GTTGCTGAACATGAATTGGATATTCAAGAATCAAAGGGTTCTGCTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056330
PEP Infomation

pacid=37459674 transcript=PGSC0003DMT400084308 locus=PGSC0003DMG400033928 ID=PGSC0003DMT400084308.v4.03 annot-version=v4.03
Sequence

METLCSNINAGSSISKSLFCYRFPSITHKRGVACGRKELPMKKLGENDQNLMKWIGKGVI
GLAAATALSFSSYSPAFAHSLTVAFPVSHTPEVNTVQRTLIEAWSLIRETFVDPTFNHQD
WDLKLQQTMVEMFPLRSEDAAYSKVRGMLSTLGDPYTRIISPKEYQSFRIGSDGNLQGVG
LFVSVQPNTGHLVVLSCVENSPAARAGIHEGDELLEINGERLDGVDSETAAQKLRGRAGT
TVTVKVHRGNGAGVSSYQEVKLPREVIKLSPVSSAIIPHKMPDGRLLKTGYVKLSSFSQS
AAMEMENTIQDMENQGVQSYILDLRNNPGGLVTAGLDVAQIWLDGDETLVNTVDRDGNMA
PISMVNGHAVTHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQSVTQLH
DGSALFVTVAKYLSPALHDIDQVGITPDVQCTVEMLNSAKDTFKERKTSSSSLEADSCIM
VAEHELDIQESKGSAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400084308
Transcript Infomation

pacid=37459674 locus=PGSC0003DMG400033928 ID=PGSC0003DMT400084308.v4.03 annot-version=v4.03
Sequence

ATGGAAACTTTGTGCTCAAATATTAATGCTGGATCATCAATCTCTAAATCATTATTTTGC
TATAGATTTCCATCCATAACACATAAAAGAGGGGTTGCTTGTGGGAGAAAGGAGCTTCCT
ATGAAAAAGCTGGGAGAGAATGATCAAAATTTGATGAAATGGATAGGGAAAGGAGTTATT
GGATTAGCTGCTGCTACTGCTTTGTCCTTCTCCTCTTATTCTCCAGCTTTCGCTCACTCT
TTAACTGTAGCATTCCCCGTCTCTCACACACCTGAGGTAAACACAGTTCAGAGGACCTTA
ATTGAGGCTTGGAGTTTGATTAGAGAGACATTCGTAGATCCAACTTTCAATCATCAAGAT
TGGGATTTGAAACTGCAACAAACCATGGTAGAAATGTTTCCATTGAGGTCAGAAGATGCT
GCCTATAGCAAAGTAAGGGGAATGCTATCTACGCTTGGAGATCCCTATACACGCATTATT
AGTCCTAAGGAGTACCAAAGTTTTAGAATAGGAAGTGATGGAAATTTACAAGGTGTTGGA
CTCTTTGTCAGTGTTCAACCAAATACAGGCCACCTGGTTGTTTTGTCCTGTGTGGAGAAT
AGCCCAGCTGCACGTGCTGGCATTCATGAAGGAGATGAATTGCTTGAGATAAATGGTGAG
AGGCTTGATGGAGTTGACAGTGAAACAGCAGCTCAAAAACTGAGGGGCCGTGCTGGTACA
ACTGTTACAGTCAAAGTTCACAGAGGTAATGGTGCAGGAGTATCCAGTTATCAAGAGGTT
AAACTACCTCGCGAAGTGATTAAGCTTTCACCAGTATCCAGTGCCATCATCCCTCATAAA
ATGCCTGATGGTCGTCTCTTGAAAACTGGATATGTAAAGTTGTCAAGCTTCTCTCAGTCT
GCTGCTATGGAAATGGAAAACACAATTCAGGATATGGAAAATCAGGGTGTGCAATCATAT
ATATTAGATCTTCGGAATAATCCTGGAGGTCTCGTTACGGCTGGGTTAGATGTTGCCCAG
ATATGGCTAGATGGCGATGAGACACTTGTGAACACTGTTGATAGGGATGGAAACATGGCA
CCAATTAGCATGGTCAATGGACATGCTGTAACACACGATCCACTTGTCGTCCTTGTGAAT
GAGGGAAGTGCAAGTGCTAGTGAGATTCTGGCCGGGGCACTCCATGATAATGGTCGTGCA
ATCCTTGTCGGGCATAAGACTTTCGGGAAAGGAAAGATACAGAGTGTTACACAGTTGCAC
GATGGATCGGCTCTATTTGTTACAGTAGCCAAGTATTTGTCTCCAGCACTTCATGACATC
GATCAAGTGGGAATAACACCTGATGTTCAGTGTACAGTTGAGATGCTTAATTCAGCCAAA
GACACCTTTAAGGAAAGGAAAACATCCTCATCATCTTTGGAGGCTGATTCTTGCATCATG
GTTGCTGAACATGAATTGGATATTCAAGAATCAAAGGGTTCTGCTTCTTGA