Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084297
CDS Infomation

pacid=37442998 polypeptide=PGSC0003DMP400056322 locus=PGSC0003DMG400033921 ID=PGSC0003DMT400084297.v4.03 annot-version=v4.03
Sequence

ATGGCGCACGATAGCGATCTCCCATGTGACGGCGATGGCGTCTGTATGGCCTGCAAAGTG
AAGCCATCGGAGAACGAATCCCTCACCTGTAAGACTTGTGCTACTCCCTGGCACGTCAGC
TGTCTCTCTGCTCCGCCCGATTCCATGGGCGACGCCGTCAACTGGGAGTGTCCTGACTGC
TCTATGCCTCCCGCCGCCGATGTTGTACCTGTTAAACAGAATGCTGCTGCTTCTTCATCT
TCTGGAGGAAGAGGCGATTTGATCGCTGCTATTCGGGTCATTGAATCTGATTCGACTCTC
ACCGAGCAAGAGAAGGCTCAGAAACGACAAGACCTCATGAGCGGAAATTCCAAAGACGAA
GGTGCGACTGTTGAAGGGGTTAATCAAGACAAGGATGTGCTGAATATTCTCGATTCAAGT
TTGAACTGCTCTATGTGCATGCAACTGCCTGAGAGACCTGTTACGACACCTTGTGGTCAT
AATTTTTGCCTGAAGTGCTTCCAAAAGTGGGTTGGGCAGCGGAAGAGTACCTGTGCTAAT
TGTCGCACTCCTATTCCAGCTAAAATGGCAAGCCAGCCTCGAATTAACTCTGCTCTGGTC
ATTGCCATTAGAATGGCAAGAATGATGCGGTCTGGTGCCTCTAGCGGGTCATCAAAAGTT
TCACATTTCGTTCACAACCAAAATAGACCTGACAAAGCTTTCACCACTGAGCGTGCAAAA
AAGACTGGAAAGGCTAATGCTTGCAGTGGGAAGATTTTTGTTACAATCCCTGGTGACCAT
TTTGGACCAATTTCAGCAGACAATGATCCAGAGCGCAACGTGGGTGTTATGGTTGGTGAG
ACTTGGGAGGATCGTTTTGAGTGTCGGCAATGGGGGGCTCATTTCCCTCATGTGGCTGGT
ATTGCAGGACAGTCAGATTATGGGGCCCAGTCTGTTGCACTTTCTGGTGGGTACGAAGAT
GATGAAGATCACGGTGAATGGTTTCTCTATACTGGAAGTGGTGGAAGAGACTTGAGTGGT
AACAAGAGAACAAACAAGCTACAATCGTTTGACCAGAAATTTGAAAAGCTTAATGAAGCT
TTACGTGTCAGCTGTCTCAAGGGTTATCCTGTCCGAGTTGTGAGGTCCCACAAGGAGAAA
TGCTCTTCGTATGCACCAGACAAAGGAGTACGATATGACGGGGTCTACAGGATTGAAAAG
TGTTGGCGGAAACCTGGGAAACAAGGATTCAAAGTTTGTCGATACCTTTTTGTGCGCTGT
GATAATGATCCTGCACCATGGACCAGTGATGAACATGGGGACCGTCCTAGGGCCTTGCCT
GCCATCAAAGAACTAAAAGGTGCCACAGATATGACTGAGAGAAAAGGAGCTCCAGCCTGG
GATTATGATGAGGAAAAGAGTTGCTGGATGTGGAAAAAGGCTCCTCCTCCTAGTAGGAAA
CCAGTTCAATGTGAAAATGAAGATGGAACAAAAATGAGACAAGTTAGACCAAAGAGACTT
ACAATGTCTGTAAAGCAGAGGCTCTTGAAAGAGTTTACTTGTCATCTTTGTCGGGAAGTG
ATGAATCACCCGCTTACCACTCCATGTGCTCATAACTTCTGCAAGGCATGTTTGGATGGT
GCCTTTGCAGGTCAATCCTTTACAAGACAGAGGACATGTGAAGGCAGACGTACATTACGA
GCCCAGAAAAATATAATGAAATGCCCATCATGCCCAACTGATATATCTGATTTCCTCCAG
AGTCCCCAGATTAATAGAGAGTTGATGAATGTGATTGAATCTCTGAAGCGCCAAATTGAG
GAAGAAAATGCAGCATTAAGTGTTGATGTTGATGATGGTAGCTTGGATGGAAACAATGAG
ATTATAGCTGATGAAGCTGTTGAAACAGATAAAAGTGTGGAGGATGATAAAGAAGGTGCA
CAGCCTGTCAATGAGACTGAAACCAAGCAGACTCACAAGAGGAAGAGATCCAGTAGCATT
GACAATGTATCACCCAAAAAACCCATTGACAAATCTGATGTTGTGCATAATCTTGAGGAA
GTTGATACTGCCCACACCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056322
PEP Infomation

pacid=37442998 transcript=PGSC0003DMT400084297 locus=PGSC0003DMG400033921 ID=PGSC0003DMT400084297.v4.03 annot-version=v4.03
Sequence

MAHDSDLPCDGDGVCMACKVKPSENESLTCKTCATPWHVSCLSAPPDSMGDAVNWECPDC
SMPPAADVVPVKQNAAASSSSGGRGDLIAAIRVIESDSTLTEQEKAQKRQDLMSGNSKDE
GATVEGVNQDKDVLNILDSSLNCSMCMQLPERPVTTPCGHNFCLKCFQKWVGQRKSTCAN
CRTPIPAKMASQPRINSALVIAIRMARMMRSGASSGSSKVSHFVHNQNRPDKAFTTERAK
KTGKANACSGKIFVTIPGDHFGPISADNDPERNVGVMVGETWEDRFECRQWGAHFPHVAG
IAGQSDYGAQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKLQSFDQKFEKLNEA
LRVSCLKGYPVRVVRSHKEKCSSYAPDKGVRYDGVYRIEKCWRKPGKQGFKVCRYLFVRC
DNDPAPWTSDEHGDRPRALPAIKELKGATDMTERKGAPAWDYDEEKSCWMWKKAPPPSRK
PVQCENEDGTKMRQVRPKRLTMSVKQRLLKEFTCHLCREVMNHPLTTPCAHNFCKACLDG
AFAGQSFTRQRTCEGRRTLRAQKNIMKCPSCPTDISDFLQSPQINRELMNVIESLKRQIE
EENAALSVDVDDGSLDGNNEIIADEAVETDKSVEDDKEGAQPVNETETKQTHKRKRSSSI
DNVSPKKPIDKSDVVHNLEEVDTAHT*

Transcript Sequence

Transcript ID

PGSC0003DMT400084297
Transcript Infomation

pacid=37442998 locus=PGSC0003DMG400033921 ID=PGSC0003DMT400084297.v4.03 annot-version=v4.03
Sequence

ATGGCGCACGATAGCGATCTCCCATGTGACGGCGATGGCGTCTGTATGGCCTGCAAAGTG
AAGCCATCGGAGAACGAATCCCTCACCTGTAAGACTTGTGCTACTCCCTGGCACGTCAGC
TGTCTCTCTGCTCCGCCCGATTCCATGGGCGACGCCGTCAACTGGGAGTGTCCTGACTGC
TCTATGCCTCCCGCCGCCGATGTTGTACCTGTTAAACAGAATGCTGCTGCTTCTTCATCT
TCTGGAGGAAGAGGCGATTTGATCGCTGCTATTCGGGTCATTGAATCTGATTCGACTCTC
ACCGAGCAAGAGAAGGCTCAGAAACGACAAGACCTCATGAGCGGAAATTCCAAAGACGAA
GGTGCGACTGTTGAAGGGGTTAATCAAGACAAGGATGTGCTGAATATTCTCGATTCAAGT
TTGAACTGCTCTATGTGCATGCAACTGCCTGAGAGACCTGTTACGACACCTTGTGGTCAT
AATTTTTGCCTGAAGTGCTTCCAAAAGTGGGTTGGGCAGCGGAAGAGTACCTGTGCTAAT
TGTCGCACTCCTATTCCAGCTAAAATGGCAAGCCAGCCTCGAATTAACTCTGCTCTGGTC
ATTGCCATTAGAATGGCAAGAATGATGCGGTCTGGTGCCTCTAGCGGGTCATCAAAAGTT
TCACATTTCGTTCACAACCAAAATAGACCTGACAAAGCTTTCACCACTGAGCGTGCAAAA
AAGACTGGAAAGGCTAATGCTTGCAGTGGGAAGATTTTTGTTACAATCCCTGGTGACCAT
TTTGGACCAATTTCAGCAGACAATGATCCAGAGCGCAACGTGGGTGTTATGGTTGGTGAG
ACTTGGGAGGATCGTTTTGAGTGTCGGCAATGGGGGGCTCATTTCCCTCATGTGGCTGGT
ATTGCAGGACAGTCAGATTATGGGGCCCAGTCTGTTGCACTTTCTGGTGGGTACGAAGAT
GATGAAGATCACGGTGAATGGTTTCTCTATACTGGAAGTGGTGGAAGAGACTTGAGTGGT
AACAAGAGAACAAACAAGCTACAATCGTTTGACCAGAAATTTGAAAAGCTTAATGAAGCT
TTACGTGTCAGCTGTCTCAAGGGTTATCCTGTCCGAGTTGTGAGGTCCCACAAGGAGAAA
TGCTCTTCGTATGCACCAGACAAAGGAGTACGATATGACGGGGTCTACAGGATTGAAAAG
TGTTGGCGGAAACCTGGGAAACAAGGATTCAAAGTTTGTCGATACCTTTTTGTGCGCTGT
GATAATGATCCTGCACCATGGACCAGTGATGAACATGGGGACCGTCCTAGGGCCTTGCCT
GCCATCAAAGAACTAAAAGGTGCCACAGATATGACTGAGAGAAAAGGAGCTCCAGCCTGG
GATTATGATGAGGAAAAGAGTTGCTGGATGTGGAAAAAGGCTCCTCCTCCTAGTAGGAAA
CCAGTTCAATGTGAAAATGAAGATGGAACAAAAATGAGACAAGTTAGACCAAAGAGACTT
ACAATGTCTGTAAAGCAGAGGCTCTTGAAAGAGTTTACTTGTCATCTTTGTCGGGAAGTG
ATGAATCACCCGCTTACCACTCCATGTGCTCATAACTTCTGCAAGGCATGTTTGGATGGT
GCCTTTGCAGGTCAATCCTTTACAAGACAGAGGACATGTGAAGGCAGACGTACATTACGA
GCCCAGAAAAATATAATGAAATGCCCATCATGCCCAACTGATATATCTGATTTCCTCCAG
AGTCCCCAGATTAATAGAGAGTTGATGAATGTGATTGAATCTCTGAAGCGCCAAATTGAG
GAAGAAAATGCAGCATTAAGTGTTGATGTTGATGATGGTAGCTTGGATGGAAACAATGAG
ATTATAGCTGATGAAGCTGTTGAAACAGATAAAAGTGTGGAGGATGATAAAGAAGGTGCA
CAGCCTGTCAATGAGACTGAAACCAAGCAGACTCACAAGAGGAAGAGATCCAGTAGCATT
GACAATGTATCACCCAAAAAACCCATTGACAAATCTGATGTTGTGCATAATCTTGAGGAA
GTTGATACTGCCCACACCTGA