Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084233
CDS Infomation

pacid=37472182 polypeptide=PGSC0003DMP400056277 locus=PGSC0003DMG400033889 ID=PGSC0003DMT400084233.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTGGAGGGACATGTCTGAATCTGGGTATCAAGATCCCATTTGGGTTTCCTGTT
TCCAATTTCAAGGCTTCTCCAAAATCTTTCTCTTCTCTCTCAACATCAGGTTTATGTAGG
GCCAGTCAAGTTGCTGAGCTTTTTCCAACTGTATCACCTGAGGTTTATGTTAGGAAGGCC
AGGTTAGAGGACTGCTGGGAAGTGGCTGAGACTCACTGCAGCTCCTTCTTCCCTGAATAC
TCTTTCCCTCTAGATTTTGTGTTAAGAATTGACAGGCTGATAGCAATGCTTTTTGGATTC
TCCATCCCAAATGGATGCCAGAGAAATTGTCTTGTTGCTGTTGTTGGCAGCAGAGATGAA
GAGGCTTGCTTATTAGGTACAGAAGAACTCAAACTTGGAGGATTTGATGGACGATTAAGT
CTCAACAAGGGTTACGTGACTGGAATATTGACCGTGGATACTGTCGCTGATTTCCTTCCG
AGAAAAGGACCATTGCGGCAGAGAAGGAAAGGGATTGCGTATATATCAAATGTTGCGGTA
CGGAAAAGATACCGTCGAAAAGGGATAGCAAAAAAGCTCATAATGAAAGCGGAGGCACAA
GCCAGGAGCTGGGGATGCCGTGCAATTGCTTTACATTGTGACACTAGCAACCCTGGAGCC
ACAAAACTGTATATAGGACAAGGCTTCAGAATCATCAAAGTGCCAGAAGGGGCAAATTGG
CCTCAACCCAAGACTTCCCCAAATGTCGAGTTTGTTTTCTTGATGAAATTACTGGACGTA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400056277
PEP Infomation

pacid=37472182 transcript=PGSC0003DMT400084233 locus=PGSC0003DMG400033889 ID=PGSC0003DMT400084233.v4.03 annot-version=v4.03
Sequence

MAVGGTCLNLGIKIPFGFPVSNFKASPKSFSSLSTSGLCRASQVAELFPTVSPEVYVRKA
RLEDCWEVAETHCSSFFPEYSFPLDFVLRIDRLIAMLFGFSIPNGCQRNCLVAVVGSRDE
EACLLGTEELKLGGFDGRLSLNKGYVTGILTVDTVADFLPRKGPLRQRRKGIAYISNVAV
RKRYRRKGIAKKLIMKAEAQARSWGCRAIALHCDTSNPGATKLYIGQGFRIIKVPEGANW
PQPKTSPNVEFVFLMKLLDV*

Transcript Sequence

Transcript ID

PGSC0003DMT400084233
Transcript Infomation

pacid=37472182 locus=PGSC0003DMG400033889 ID=PGSC0003DMT400084233.v4.03 annot-version=v4.03
Sequence

ATGGCAGTTGGAGGGACATGTCTGAATCTGGGTATCAAGATCCCATTTGGGTTTCCTGTT
TCCAATTTCAAGGCTTCTCCAAAATCTTTCTCTTCTCTCTCAACATCAGGTTTATGTAGG
GCCAGTCAAGTTGCTGAGCTTTTTCCAACTGTATCACCTGAGGTTTATGTTAGGAAGGCC
AGGTTAGAGGACTGCTGGGAAGTGGCTGAGACTCACTGCAGCTCCTTCTTCCCTGAATAC
TCTTTCCCTCTAGATTTTGTGTTAAGAATTGACAGGCTGATAGCAATGCTTTTTGGATTC
TCCATCCCAAATGGATGCCAGAGAAATTGTCTTGTTGCTGTTGTTGGCAGCAGAGATGAA
GAGGCTTGCTTATTAGGTACAGAAGAACTCAAACTTGGAGGATTTGATGGACGATTAAGT
CTCAACAAGGGTTACGTGACTGGAATATTGACCGTGGATACTGTCGCTGATTTCCTTCCG
AGAAAAGGACCATTGCGGCAGAGAAGGAAAGGGATTGCGTATATATCAAATGTTGCGGTA
CGGAAAAGATACCGTCGAAAAGGGATAGCAAAAAAGCTCATAATGAAAGCGGAGGCACAA
GCCAGGAGCTGGGGATGCCGTGCAATTGCTTTACATTGTGACACTAGCAACCCTGGAGCC
ACAAAACTGTATATAGGACAAGGCTTCAGAATCATCAAAGTGCCAGAAGGGGCAAATTGG
CCTCAACCCAAGACTTCCCCAAATGTCGAGTTTGTTTTCTTGATGAAATTACTGGACGTA
TAA