Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084225
CDS Infomation

pacid=37445566 polypeptide=PGSC0003DMP400056272 locus=PGSC0003DMG400033883 ID=PGSC0003DMT400084225.v4.03 annot-version=v4.03
Sequence

ATGCCACAAACATCATTGTTTGTATCAGGTGTTAGCCCTTTTTACCTAGGAATTCAACTC
CAACAGTTCAAGCTATTTAAGGCTAAAATTGATGAATTTCAGAGTAAAGGTAACACTAAT
CTGCCTCCCTCAGACATATTTGGGAAATCTCTTTATACATTCTATATAGGTCAGAATGAC
TTCACTGGTGATTTGGGAAGTAAAGGAATAGGTGGAGTGAAGGAGTACTTACCTCAAGTA
GTTTCCCAAATTGTTAGCACAATCAAGGAAATCTATGGATTAGGGGGAAGAACATTTTTG
GTACTTAACCTTGCACCAATTGGATGTTACCCAGCATTTTTGGTGAAGCTCCCTCATGAA
AGTTCTGATATTGATGAGTGTGGATGCTTGATATCATACAACAATGCAGTTGTGGACTAT
AACAATATGCTTAAAGATGCATTGGCACAAACAAGAAAAGATCTTTCAGATGCAAATGTT
ATTTATGTGGACACTCATGCTGTCCTCTTAGAACTTTTCCAACACCCCACTTCTCACGGG
TTAAAATATGGAAACAAAGCATGTTGTGGACAAGGAGGTGGTTCTTACAACTTTAACCAG
GAAGTATACTGTGGAAATACCAAAGAGGTAAATGGACAAACATTGTCAGCCACAGCCTGT
GAGGATCCATACAATTATGTGAGCTGGGATGGGATACATGCCACTGAAGCAGCAAACAAA
ATTACAGCAAATATCATTCTCAATGATGGTTCTATTTTTGATCCTCCATTTTCACTACAT
AAATTCTGTGATATTCAGCCTGTAGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056272
PEP Infomation

pacid=37445566 transcript=PGSC0003DMT400084225 locus=PGSC0003DMG400033883 ID=PGSC0003DMT400084225.v4.03 annot-version=v4.03
Sequence

MPQTSLFVSGVSPFYLGIQLQQFKLFKAKIDEFQSKGNTNLPPSDIFGKSLYTFYIGQND
FTGDLGSKGIGGVKEYLPQVVSQIVSTIKEIYGLGGRTFLVLNLAPIGCYPAFLVKLPHE
SSDIDECGCLISYNNAVVDYNNMLKDALAQTRKDLSDANVIYVDTHAVLLELFQHPTSHG
LKYGNKACCGQGGGSYNFNQEVYCGNTKEVNGQTLSATACEDPYNYVSWDGIHATEAANK
ITANIILNDGSIFDPPFSLHKFCDIQPVG*

Transcript Sequence

Transcript ID

PGSC0003DMT400084225
Transcript Infomation

pacid=37445566 locus=PGSC0003DMG400033883 ID=PGSC0003DMT400084225.v4.03 annot-version=v4.03
Sequence

ATGCCACAAACATCATTGTTTGTATCAGGTGTTAGCCCTTTTTACCTAGGAATTCAACTC
CAACAGTTCAAGCTATTTAAGGCTAAAATTGATGAATTTCAGAGTAAAGGTAACACTAAT
CTGCCTCCCTCAGACATATTTGGGAAATCTCTTTATACATTCTATATAGGTCAGAATGAC
TTCACTGGTGATTTGGGAAGTAAAGGAATAGGTGGAGTGAAGGAGTACTTACCTCAAGTA
GTTTCCCAAATTGTTAGCACAATCAAGGAAATCTATGGATTAGGGGGAAGAACATTTTTG
GTACTTAACCTTGCACCAATTGGATGTTACCCAGCATTTTTGGTGAAGCTCCCTCATGAA
AGTTCTGATATTGATGAGTGTGGATGCTTGATATCATACAACAATGCAGTTGTGGACTAT
AACAATATGCTTAAAGATGCATTGGCACAAACAAGAAAAGATCTTTCAGATGCAAATGTT
ATTTATGTGGACACTCATGCTGTCCTCTTAGAACTTTTCCAACACCCCACTTCTCACGGG
TTAAAATATGGAAACAAAGCATGTTGTGGACAAGGAGGTGGTTCTTACAACTTTAACCAG
GAAGTATACTGTGGAAATACCAAAGAGGTAAATGGACAAACATTGTCAGCCACAGCCTGT
GAGGATCCATACAATTATGTGAGCTGGGATGGGATACATGCCACTGAAGCAGCAAACAAA
ATTACAGCAAATATCATTCTCAATGATGGTTCTATTTTTGATCCTCCATTTTCACTACAT
AAATTCTGTGATATTCAGCCTGTAGGTTGA