Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084224
CDS Infomation

pacid=37443367 polypeptide=PGSC0003DMP400056271 locus=PGSC0003DMG400033882 ID=PGSC0003DMT400084224.v4.03 annot-version=v4.03
Sequence

ATGGGTATCAAATATGGTTTACTTTTCTCAGTATTAGTGCTACTTCTTCTAGCACTAAAA
CTAGAAGCAGGAGGAATTGTAATTTATTGGGGGCAAAATGGGAATGAAGGTAGCTTAGCT
AGTACTTGTGCATCAAATAACTATGCAATTGTGAATATTGCATTTCTTGTAGTTTTTGGG
AATGGGCAAACACCAGTGTTGAACTTGGCTGGTCATTGTAATCCTAGTGTTGGTGGATGC
ACTGGGTTAAGCAATGACATTAGAGCATGTCAAAGTAGAGGTATCAAAGTTATGCTTTCA
CTTGGTGGTGGTGTTGGAAGTTATTCCCTTTCTTCTGCTGTTGATGCTAGGAATGTAGCA
AACTATTTATGGAACAATTATCTTGGAGGTCAATCAACTTCACGTCCACTAGGTGATGCA
ATTTTAGATGGAATTGATTTTGATATAGAAAGAGGAACAACACAACACTGGGATGAACTA
GCAAGAGCCCTCTCAGGATTTAGCCAACAAAGGAAAGTATACTTAACTGCAGCTCCACAA
TGTCCATTCCCTGATTCATGGTTAAATGGTGCACTCTCTACTGGCCTATTCGACTACGTT
TGGGTTCAATTCTACAACAATCCCCCCTGTCAATACTCTGGTGGTAGCGCGGAAAATCTT
AAGAGTTATTGGAATAAATGGACCGCGATTCAAGCTGGAAAGATTTTTCTAGGATTGCCC
GCGGCTCCAGGAGCTGCTGGAAGTGGTTTTATACCATCTGATGTGCTTGTTTCTCAGGTT
TTACCAGCAATTAGTGGTTCACCTAAGTATGGTGGTGTTATGCTTTGGTCTAAATTTTAT
GATAATGGTTATAGCTCTGCTATAAAGCCTAGTGTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400056271
PEP Infomation

pacid=37443367 transcript=PGSC0003DMT400084224 locus=PGSC0003DMG400033882 ID=PGSC0003DMT400084224.v4.03 annot-version=v4.03
Sequence

MGIKYGLLFSVLVLLLLALKLEAGGIVIYWGQNGNEGSLASTCASNNYAIVNIAFLVVFG
NGQTPVLNLAGHCNPSVGGCTGLSNDIRACQSRGIKVMLSLGGGVGSYSLSSAVDARNVA
NYLWNNYLGGQSTSRPLGDAILDGIDFDIERGTTQHWDELARALSGFSQQRKVYLTAAPQ
CPFPDSWLNGALSTGLFDYVWVQFYNNPPCQYSGGSAENLKSYWNKWTAIQAGKIFLGLP
AAPGAAGSGFIPSDVLVSQVLPAISGSPKYGGVMLWSKFYDNGYSSAIKPSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400084224
Transcript Infomation

pacid=37443367 locus=PGSC0003DMG400033882 ID=PGSC0003DMT400084224.v4.03 annot-version=v4.03
Sequence

ATGGGTATCAAATATGGTTTACTTTTCTCAGTATTAGTGCTACTTCTTCTAGCACTAAAA
CTAGAAGCAGGAGGAATTGTAATTTATTGGGGGCAAAATGGGAATGAAGGTAGCTTAGCT
AGTACTTGTGCATCAAATAACTATGCAATTGTGAATATTGCATTTCTTGTAGTTTTTGGG
AATGGGCAAACACCAGTGTTGAACTTGGCTGGTCATTGTAATCCTAGTGTTGGTGGATGC
ACTGGGTTAAGCAATGACATTAGAGCATGTCAAAGTAGAGGTATCAAAGTTATGCTTTCA
CTTGGTGGTGGTGTTGGAAGTTATTCCCTTTCTTCTGCTGTTGATGCTAGGAATGTAGCA
AACTATTTATGGAACAATTATCTTGGAGGTCAATCAACTTCACGTCCACTAGGTGATGCA
ATTTTAGATGGAATTGATTTTGATATAGAAAGAGGAACAACACAACACTGGGATGAACTA
GCAAGAGCCCTCTCAGGATTTAGCCAACAAAGGAAAGTATACTTAACTGCAGCTCCACAA
TGTCCATTCCCTGATTCATGGTTAAATGGTGCACTCTCTACTGGCCTATTCGACTACGTT
TGGGTTCAATTCTACAACAATCCCCCCTGTCAATACTCTGGTGGTAGCGCGGAAAATCTT
AAGAGTTATTGGAATAAATGGACCGCGATTCAAGCTGGAAAGATTTTTCTAGGATTGCCC
GCGGCTCCAGGAGCTGCTGGAAGTGGTTTTATACCATCTGATGTGCTTGTTTCTCAGGTT
TTACCAGCAATTAGTGGTTCACCTAAGTATGGTGGTGTTATGCTTTGGTCTAAATTTTAT
GATAATGGTTATAGCTCTGCTATAAAGCCTAGTGTCTAA