Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400084210
CDS Infomation

pacid=37442690 polypeptide=PGSC0003DMP400056257 locus=PGSC0003DMG400033879 ID=PGSC0003DMT400084210.v4.03 annot-version=v4.03
Sequence

ATGAAGATGGTGGAGGAAAGTGAGAATAAGTTTGATCCACAACAAGTGATCGATGAATTT
GAGCTATTAAGCAAAGATGCTGGGAGAATTCAAGAAGAGACCTTACAAAAGATTCTTGAA
GAAAATGGAGGGACAGAATATTTACAACAATGGGGTCTTAATGGTAAAACAGATCAAGTT
TCTTTCAAGAATTGTGTTCCTCTTGTTACACATAAGGATTTGGAGCCTTACATTCATAGA
ATTGTTGATGGTGATCTTACTCCTATTCTTACTAGAAAATCTATTACCACTATCTCGTTG
AGCTCTGGTACAACTCAAGGAAAACCAAAATTTGTACCTTTCAATGAAGAATTGATGGAA
TCCACCATGCAAATATTCAAGACTTCTTTTGCCTTTAGGAACAGAGAATTCCCAGTTGTA
AACGGGAAAGCATTACAGTTCATTTATGGAAGCAAGCAGTTCAAGACGAAGGGAGGTTTA
GCAGCTGGAACAGCCACAACAAATGTGTATCGAAATTCGCAATTCAAGAAGACAATGAAA
GCAATGCAGACCCCGTGTTGTAGCCCCGATGAAGTGATATTCGGCCCTGATTTCAATCAA
TCCTTGTACTGTCATCTATTATGTGGTCTCATTCTACGTAACGAAGTTCAAGTTGTCTCA
TCTACCTTTGCTCATAGTATTGTCCATGCTTTTAGAAAATTCGAACAAGTATGGCAAGAA
CTTGTTGCAAATATAAGGGACGGAGTCCTTTCTAGTCGCGTAACTGTTCCTTCTATAAGA
TCCGCAATGTCAAAATTACTCAAGCCTGATCCAGAACTGGCTGATGCTATTTATAACAAG
TGTATTCGGTTAAGTAATTGGTACGGGTTGATACCTGAATTATTCCCAAACACCAGGTAC
ATATATGGTATCATGACCGGATCAATGGAACCGTACTTGAAGAAATTGAGGCATTATGCA
GGGGAGCTACCTCTGCTTAGTGCAGATTACGGATCTTCTGAAGGATGGATCGGAGCAAAT
GTTAATCCTGAATTGCCTCCCGAGCTAGTTACTTATGCTGTTCTTCCTAATATTGGTTAT
TTCGAATTCATTCCTCTCGTGGAAAATGTAGATGGCGTGGAGGCTACGCCAGTTGGTTTA
ACTGAAGTTAAACTCGGTGAAGAGTATGAAATTGTTGTCACCAATTTCGCTGGTTTATAT
CGATACAGGCTCGGTGATGTGGTAAAGATAAAAGGATTCTACAATGGCACTCCAGAACTC
CAGTTTATTTGTCGTAGGAATCTCTTACTGAGCATCAACATCGACAAAAACACCGAGAAA
GATTTACAACTAGCCGTGGAGGCAGCAGCACAGCTGTTATTAAACGAGAAGTTAGAAGTA
GTCGATTTCTCTAGCAACGTAAACACATCAGCTGATCCAGGGCACTACGTGATCTTCTGG
GAACTGAATGGTAAGGCAAGTGAGGAAATTTTGAAAGAATGTTGTAATTGTTTAGACAAA
TCTTTCGTCGATGCAGGCTATGTTAGCTCTCGGAAGGTCAAAACCATCGGTCCCCTTGAG
CTACGGATAGTGAAGAGAGGGACGTTTCATAAGATTTTAGATCATTTTGTTGGATTAGGA
GCAGCAGTTAGCCAGTTCAAAACACCGAGATGTGTCGGTACGACAAATCTCTCTGTGCTG
CAAATATTGACTAGTAATGCTGTTGAGAGCTATTTTAGTACTGCATTTAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056257
PEP Infomation

pacid=37442690 transcript=PGSC0003DMT400084210 locus=PGSC0003DMG400033879 ID=PGSC0003DMT400084210.v4.03 annot-version=v4.03
Sequence

MKMVEESENKFDPQQVIDEFELLSKDAGRIQEETLQKILEENGGTEYLQQWGLNGKTDQV
SFKNCVPLVTHKDLEPYIHRIVDGDLTPILTRKSITTISLSSGTTQGKPKFVPFNEELME
STMQIFKTSFAFRNREFPVVNGKALQFIYGSKQFKTKGGLAAGTATTNVYRNSQFKKTMK
AMQTPCCSPDEVIFGPDFNQSLYCHLLCGLILRNEVQVVSSTFAHSIVHAFRKFEQVWQE
LVANIRDGVLSSRVTVPSIRSAMSKLLKPDPELADAIYNKCIRLSNWYGLIPELFPNTRY
IYGIMTGSMEPYLKKLRHYAGELPLLSADYGSSEGWIGANVNPELPPELVTYAVLPNIGY
FEFIPLVENVDGVEATPVGLTEVKLGEEYEIVVTNFAGLYRYRLGDVVKIKGFYNGTPEL
QFICRRNLLLSINIDKNTEKDLQLAVEAAAQLLLNEKLEVVDFSSNVNTSADPGHYVIFW
ELNGKASEEILKECCNCLDKSFVDAGYVSSRKVKTIGPLELRIVKRGTFHKILDHFVGLG
AAVSQFKTPRCVGTTNLSVLQILTSNAVESYFSTAFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400084210
Transcript Infomation

pacid=37442690 locus=PGSC0003DMG400033879 ID=PGSC0003DMT400084210.v4.03 annot-version=v4.03
Sequence

ATGAAGATGGTGGAGGAAAGTGAGAATAAGTTTGATCCACAACAAGTGATCGATGAATTT
GAGCTATTAAGCAAAGATGCTGGGAGAATTCAAGAAGAGACCTTACAAAAGATTCTTGAA
GAAAATGGAGGGACAGAATATTTACAACAATGGGGTCTTAATGGTAAAACAGATCAAGTT
TCTTTCAAGAATTGTGTTCCTCTTGTTACACATAAGGATTTGGAGCCTTACATTCATAGA
ATTGTTGATGGTGATCTTACTCCTATTCTTACTAGAAAATCTATTACCACTATCTCGTTG
AGCTCTGGTACAACTCAAGGAAAACCAAAATTTGTACCTTTCAATGAAGAATTGATGGAA
TCCACCATGCAAATATTCAAGACTTCTTTTGCCTTTAGGAACAGAGAATTCCCAGTTGTA
AACGGGAAAGCATTACAGTTCATTTATGGAAGCAAGCAGTTCAAGACGAAGGGAGGTTTA
GCAGCTGGAACAGCCACAACAAATGTGTATCGAAATTCGCAATTCAAGAAGACAATGAAA
GCAATGCAGACCCCGTGTTGTAGCCCCGATGAAGTGATATTCGGCCCTGATTTCAATCAA
TCCTTGTACTGTCATCTATTATGTGGTCTCATTCTACGTAACGAAGTTCAAGTTGTCTCA
TCTACCTTTGCTCATAGTATTGTCCATGCTTTTAGAAAATTCGAACAAGTATGGCAAGAA
CTTGTTGCAAATATAAGGGACGGAGTCCTTTCTAGTCGCGTAACTGTTCCTTCTATAAGA
TCCGCAATGTCAAAATTACTCAAGCCTGATCCAGAACTGGCTGATGCTATTTATAACAAG
TGTATTCGGTTAAGTAATTGGTACGGGTTGATACCTGAATTATTCCCAAACACCAGGTAC
ATATATGGTATCATGACCGGATCAATGGAACCGTACTTGAAGAAATTGAGGCATTATGCA
GGGGAGCTACCTCTGCTTAGTGCAGATTACGGATCTTCTGAAGGATGGATCGGAGCAAAT
GTTAATCCTGAATTGCCTCCCGAGCTAGTTACTTATGCTGTTCTTCCTAATATTGGTTAT
TTCGAATTCATTCCTCTCGTGGAAAATGTAGATGGCGTGGAGGCTACGCCAGTTGGTTTA
ACTGAAGTTAAACTCGGTGAAGAGTATGAAATTGTTGTCACCAATTTCGCTGGTTTATAT
CGATACAGGCTCGGTGATGTGGTAAAGATAAAAGGATTCTACAATGGCACTCCAGAACTC
CAGTTTATTTGTCGTAGGAATCTCTTACTGAGCATCAACATCGACAAAAACACCGAGAAA
GATTTACAACTAGCCGTGGAGGCAGCAGCACAGCTGTTATTAAACGAGAAGTTAGAAGTA
GTCGATTTCTCTAGCAACGTAAACACATCAGCTGATCCAGGGCACTACGTGATCTTCTGG
GAACTGAATGGTAAGGCAAGTGAGGAAATTTTGAAAGAATGTTGTAATTGTTTAGACAAA
TCTTTCGTCGATGCAGGCTATGTTAGCTCTCGGAAGGTCAAAACCATCGGTCCCCTTGAG
CTACGGATAGTGAAGAGAGGGACGTTTCATAAGATTTTAGATCATTTTGTTGGATTAGGA
GCAGCAGTTAGCCAGTTCAAAACACCGAGATGTGTCGGTACGACAAATCTCTCTGTGCTG
CAAATATTGACTAGTAATGCTGTTGAGAGCTATTTTAGTACTGCATTTAGTTGA