Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083957
CDS Infomation

pacid=37461960 polypeptide=PGSC0003DMP400056191 locus=PGSC0003DMG400033681 ID=PGSC0003DMT400083957.v4.03 annot-version=v4.03
Sequence

ATGACTGAGCCATTCACTGACTCCGATTCCGACGCCTGGCAAGATCTTCTCCGGAGAATG
TTGCCGGCAGGAGCTCCGTTGCCGGACGATGAACAACTTGACTACTCCATCGCCGTTGAG
TATAAAGGTCCTCCGTTGGATTTTCCTGTTCCTGTAGTTGATCCACTCTCTTCCCAAACT
ACCCTCCAAAAACCTCCCAAATACCGTAAGGTACCGTCTGTTCATTCTAAGTTTGCTCTG
CACATGACGAAAAACAGTAGTGGAAGCGGAAGTGGAAGTTCGAGTTCGGCTTCAAGGCTA
CGCAACAATTCCAGCTCGGAATTCGAAAGTAAAATCCCGACGGATCAGTCTCTTTCGGAC
TTGAACAATAGTGGTAATGTTCTGACTTCTGATATTGATGAAAATGTTGAGAATGAATAT
GAACATGATGATGATCAATATAATAGCGTTGCTAGAAATGAGTATAATTCACCGCAGTCT
GATTATGTTGATGGTAAATCATTGCCGGTAGGGGAGAAAGATGGGAAAAATGATAGTCTA
GGGGATAAGGTTAGGGTTCGGGTCTGTAGTAGGTGTGGGAAGAAGAGTAGGTTAAGGGAG
AGAGAGTTTTGCATTGTGTGTGGGGCTAGGTACTGTAGAAACTGTTTGCTTAAGGCTATG
GGCTCAATGCCAGAGGGTAGGAAATGCGTGGGATGCATAGGAGAGACTATAGATGAGGCT
AACAGAGAGAAATTGGGTAAGTGTTCGCGTTTGCTGGCGAAAGTCTGCAGTCCATTGGAA
GTCAAGCAGATAATGAAGGCTGAGAGTGAGTGCTTGGCGAACCAAATTCAACCTGAGCAG
GTGTGGGTCAATGGAAGGCCATTGCGGGAGGAAGAATTGGTAGAGTTGCTCGGATGTGCA
ATGTCACCACAGAATTTGAGACCTGGAAAGTATTGGTATGACAAGGATTCAGGGCTTTGG
GGAAAGGAGGGAGAGAAGCCAGATAGGATAATAAGTTCAAAACTGAATGTGGGTGGTAAG
CTTCAGATTGATGCTAGTAAAGGAAACACAAAAGTATTCATCAATGGCCGGGAGATTACA
AAGGTTGAGTTCAGGGTTCTGAAGTTAGCCAAGGTTCAGTGTCAACGAGGTACTCACTTT
TGGGTATATGAGGATGGATCCTACGAGGAAGAAGGTCAAAATAACATTAGAGGAAACATA
TGGGGAAAGGCATCTACTCGTTTCATTTGTTCATTGTTTTCATTGCCTGTTCCACCTGCA
AATATTCATGGGCCAAAAGAAGATGCAACTGCCTTTTCAGGTGGGTCTATACCTGAGTAT
TTGGAGCATGGTAGAGTACAGAAACTTTTGTTGTTTGGGTTGGAAGGATCCGGGACAAGC
ACCATTTTTAAGCAGGTGAAGTTTATGTCTAAAAGCAAATTCACAGTTGATGAGGTACAA
AATATCAAGCTTACCATTCAAAGAAACATCTATAGATACCTTAGTGTCTTGCTCGAGGGG
CGAGAGCACTTTGAGGAGGAGGCATTGATGGATAAGGGAACTTCTGATTTGGAGAGAGAA
AATCTTTCACCAGGAACTGATGGGAGCAGGCGCTGCATCTACTCAATCAATCAAAGAGTA
AAACATTTTTCTGATTGGTTACTGGAAATCATAGCTATGGGAGATTTGGATGCTTTCTTT
CCTGCTGCTACACGTGAATATGCACCAGTTGTAGATGAGATCTGGAGAGACCCTGCCATC
CAGGAAACATACAAGAGAAGGGGTGAACTGCATTTTCTTCCTGATACTGCTAACTATTTC
CTGGATCAGGCCCTCGAGATATCTAGTAATGAGTATGAACCTTCAGAAAGAGACATTTTA
TATGCTGAAGGGGTGACTCCTAGCAATGGGCTTGCTTCTCTTGAATTCTCATTTGATGAT
CACAGCCCCATGTCTGAGATCTACGGCGAGGACTTAGAAAGCCAACCTTCTTGGACCAAG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400056191
PEP Infomation

pacid=37461960 transcript=PGSC0003DMT400083957 locus=PGSC0003DMG400033681 ID=PGSC0003DMT400083957.v4.03 annot-version=v4.03
Sequence

MTEPFTDSDSDAWQDLLRRMLPAGAPLPDDEQLDYSIAVEYKGPPLDFPVPVVDPLSSQT
TLQKPPKYRKVPSVHSKFALHMTKNSSGSGSGSSSSASRLRNNSSSEFESKIPTDQSLSD
LNNSGNVLTSDIDENVENEYEHDDDQYNSVARNEYNSPQSDYVDGKSLPVGEKDGKNDSL
GDKVRVRVCSRCGKKSRLREREFCIVCGARYCRNCLLKAMGSMPEGRKCVGCIGETIDEA
NREKLGKCSRLLAKVCSPLEVKQIMKAESECLANQIQPEQVWVNGRPLREEELVELLGCA
MSPQNLRPGKYWYDKDSGLWGKEGEKPDRIISSKLNVGGKLQIDASKGNTKVFINGREIT
KVEFRVLKLAKVQCQRGTHFWVYEDGSYEEEGQNNIRGNIWGKASTRFICSLFSLPVPPA
NIHGPKEDATAFSGGSIPEYLEHGRVQKLLLFGLEGSGTSTIFKQVKFMSKSKFTVDEVQ
NIKLTIQRNIYRYLSVLLEGREHFEEEALMDKGTSDLERENLSPGTDGSRRCIYSINQRV
KHFSDWLLEIIAMGDLDAFFPAATREYAPVVDEIWRDPAIQETYKRRGELHFLPDTANYF
LDQALEISSNEYEPSERDILYAEGVTPSNGLASLEFSFDDHSPMSEIYGEDLESQPSWTK
*

Transcript Sequence

Transcript ID

PGSC0003DMT400083957
Transcript Infomation

pacid=37461960 locus=PGSC0003DMG400033681 ID=PGSC0003DMT400083957.v4.03 annot-version=v4.03
Sequence

ATGACTGAGCCATTCACTGACTCCGATTCCGACGCCTGGCAAGATCTTCTCCGGAGAATG
TTGCCGGCAGGAGCTCCGTTGCCGGACGATGAACAACTTGACTACTCCATCGCCGTTGAG
TATAAAGGTCCTCCGTTGGATTTTCCTGTTCCTGTAGTTGATCCACTCTCTTCCCAAACT
ACCCTCCAAAAACCTCCCAAATACCGTAAGGTACCGTCTGTTCATTCTAAGTTTGCTCTG
CACATGACGAAAAACAGTAGTGGAAGCGGAAGTGGAAGTTCGAGTTCGGCTTCAAGGCTA
CGCAACAATTCCAGCTCGGAATTCGAAAGTAAAATCCCGACGGATCAGTCTCTTTCGGAC
TTGAACAATAGTGGTAATGTTCTGACTTCTGATATTGATGAAAATGTTGAGAATGAATAT
GAACATGATGATGATCAATATAATAGCGTTGCTAGAAATGAGTATAATTCACCGCAGTCT
GATTATGTTGATGGTAAATCATTGCCGGTAGGGGAGAAAGATGGGAAAAATGATAGTCTA
GGGGATAAGGTTAGGGTTCGGGTCTGTAGTAGGTGTGGGAAGAAGAGTAGGTTAAGGGAG
AGAGAGTTTTGCATTGTGTGTGGGGCTAGGTACTGTAGAAACTGTTTGCTTAAGGCTATG
GGCTCAATGCCAGAGGGTAGGAAATGCGTGGGATGCATAGGAGAGACTATAGATGAGGCT
AACAGAGAGAAATTGGGTAAGTGTTCGCGTTTGCTGGCGAAAGTCTGCAGTCCATTGGAA
GTCAAGCAGATAATGAAGGCTGAGAGTGAGTGCTTGGCGAACCAAATTCAACCTGAGCAG
GTGTGGGTCAATGGAAGGCCATTGCGGGAGGAAGAATTGGTAGAGTTGCTCGGATGTGCA
ATGTCACCACAGAATTTGAGACCTGGAAAGTATTGGTATGACAAGGATTCAGGGCTTTGG
GGAAAGGAGGGAGAGAAGCCAGATAGGATAATAAGTTCAAAACTGAATGTGGGTGGTAAG
CTTCAGATTGATGCTAGTAAAGGAAACACAAAAGTATTCATCAATGGCCGGGAGATTACA
AAGGTTGAGTTCAGGGTTCTGAAGTTAGCCAAGGTTCAGTGTCAACGAGGTACTCACTTT
TGGGTATATGAGGATGGATCCTACGAGGAAGAAGGTCAAAATAACATTAGAGGAAACATA
TGGGGAAAGGCATCTACTCGTTTCATTTGTTCATTGTTTTCATTGCCTGTTCCACCTGCA
AATATTCATGGGCCAAAAGAAGATGCAACTGCCTTTTCAGGTGGGTCTATACCTGAGTAT
TTGGAGCATGGTAGAGTACAGAAACTTTTGTTGTTTGGGTTGGAAGGATCCGGGACAAGC
ACCATTTTTAAGCAGGTGAAGTTTATGTCTAAAAGCAAATTCACAGTTGATGAGGTACAA
AATATCAAGCTTACCATTCAAAGAAACATCTATAGATACCTTAGTGTCTTGCTCGAGGGG
CGAGAGCACTTTGAGGAGGAGGCATTGATGGATAAGGGAACTTCTGATTTGGAGAGAGAA
AATCTTTCACCAGGAACTGATGGGAGCAGGCGCTGCATCTACTCAATCAATCAAAGAGTA
AAACATTTTTCTGATTGGTTACTGGAAATCATAGCTATGGGAGATTTGGATGCTTTCTTT
CCTGCTGCTACACGTGAATATGCACCAGTTGTAGATGAGATCTGGAGAGACCCTGCCATC
CAGGAAACATACAAGAGAAGGGGTGAACTGCATTTTCTTCCTGATACTGCTAACTATTTC
CTGGATCAGGCCCTCGAGATATCTAGTAATGAGTATGAACCTTCAGAAAGAGACATTTTA
TATGCTGAAGGGGTGACTCCTAGCAATGGGCTTGCTTCTCTTGAATTCTCATTTGATGAT
CACAGCCCCATGTCTGAGATCTACGGCGAGGACTTAGAAAGCCAACCTTCTTGGACCAAG
TAA