Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083909
CDS Infomation

pacid=37458214 polypeptide=PGSC0003DMP400056156 locus=PGSC0003DMG400033651 ID=PGSC0003DMT400083909.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGTACTCGTCTCCATTGTGCTTGAACAATTGGGCACTTTCATTGTGGAACAA
GTTAAAGAACACGTTAAAGAACAAGTAGAAGAGCTGAAAATGGCTATTGGGATCAAGAAA
GAGATCGAAAATTTATCTTTGAAGTTGAAAATGATAAGAGCAGCATTGGATGATGCAGAG
AGAAGAAGGGTCAAAGATATATATGTTAAGCATTGGTTAGAAGTTCTTGAAATTTTCTCT
TATGATGCAGACAATGTGTTAGATGAATGGCGCACAAGAATACTCCAGCAACAAATTGAA
AGAGATGAGTCTGTTGCTGATGCTGGTTCTGGTGCTGCTGTTTCGATTCCTAAGAAGAAA
GTAAGTTGCTTTTCACTGTCTTGTTGTTTTACTTTCAAGAAACTTGAGGTTAATCGCGAT
ATTGTTCGTAAAATAAAGGAATTGGATGTGAAGTTAGAAGAGATTGTGAGGGATAAAGAT
CAGTTCAATTTTGTAGTTAATGCAACTGGTGGTGGTGGTAGTGTTTCTGATCAAGATGCG
TTTAGAAGAGTTATGAGTACGGGTATTGTTGATGAATCAGAAGTACATGGTAGGGATTCT
GATAAAGATGTTGTAATGAGGAAGTTGCTTGAGAGTAGTGATCAAGAAAGTGTCCCTCTT
GTTGTTTCTGTTGTGGGTACAGGTGGGATTGGAAAAACAACACTTGCCCAACTAGCTTAT
AGTGATGAGGAATTGAAGGGTCATTTCGATAAAAGAATTTGGATTTGTGTATCTGATCCT
TTCGATGAAGTCAAAGTTGCAAAAGCTATTCTTGAAGGGTTAACTAAAAGCTCTCCGAAT
CTGTCTGAGTTCCATATGTTGTTAGAAAGAATTCAAGAATGTGTCTCTAAGAAAAGGTTC
TTTCTTGTGCTAGATGATGTGTGGTCTGAAGATTATTCTAAATGGGAACCGTTGAAGAAC
TCCCTCAAGAATGGAGCTCCTGGAAGTAGAATCTTGGTTACATCCCGGAGTGAGAGGGTT
GTGGGGATTATGGACAGTTCTTACATGCATAGGTTGGGACAGCTATCAGATTCAGATTGC
TGGGCATTGTTTAGTCGGATAGCATTTTCAGGAAGGAGTAACGAGGATCGTGAGAATTTA
GAAGATATTGGAAGGAGAATTGTTCGAAAATGCAAAGGATTGCCACTTGCTGCAAAGGCT
ATGGGAAGTTTCCTACGTTTTAAGGTTACAGAACAAGAGTGGCAAACTGTTTTGGACAAT
CAAATATGGGAACAGGAAGAAGTGACATTAGACCTTTTTCCTCATTTGTACTTGAGCTAC
AATGACTTGCTCCCAATCCTGAAGCGTTGTTTCTCATATTGTGCCATTTTTCCTAAAGAT
ACTGTCATAAATGTAGACAAGTTGGTCAGAATTTGGATGGCACAAGGTTATCTCAGCACA
GTTGAAAATAACCAGCAGGAAGTTAGAGGACGCGAGTACTTCATGAACTTAGCTATGCGC
TCTTTCTTTCAGGAGTTGGAGACAGATGATAAAAATACAAGTGTGATAATATCTTGCAAA
ATGCATGATGTTGTGCATGATTTTGCTCAGTTAATTTCAAAAAATGACTGCTATAGCATC
ACAGGGACCGAAAGCACAGAAAAAGTTCTTAGTGTTCATCATTTATGCTGGGAGAGAACT
GACAGTACAGTAACTCCTGTTTCTGTCTGTGATGTTGAAAAGATCCGCAGTCTTTTTGCT
GAACACTTGCTCGCGAAAGAGCTTACTCACGATCTGGTCAAAGGTCTTAAATGTCTAAGA
GTTCTAAATTTACATGGCTGTGGAATACAAGAACTCCCTCAAGAAATCGGCAATCTGTTC
CATCTGAGGTACATTGATTTAAGCAGCAGCCAAGTACAGAACTTGCCTGAAGCCATTTGC
CGGTTGTGTAATCTGCAAACGTTAGATCTTCAAGGATGTAAGCGTCTTTCAAGACTTCCT
CAACATATAGGAAGACTGATAAACTTGAGACACCTCATTACAACTGACACACCCAAGTTG
GAATCTTTTCCTCAAGATATCGGAAATCTAGCTCAGCTCAGGACTTTGAGTGACTTTGTA
GTTGGGAAAGGATCAAGCAAGCTAGGATATATCGGAAAATTGAACCAGCTTCAAGGGTAT
GTATCTATCCATGTGATCGACAGTTTGAACGCTGCAGAAGACCTAGTTGAAGCACAAAAT
GCAGCATTAAGAATGAAGCCATACATCAAGGAACTACGTTTGAATTTCTACTGGGCAAGT
GAGGTAAGTATGGATGTGATGGAAGCTCTAATACCACCTCCAAACCTTAGATTCTTGACC
ATCAACGGATACAGAGGCACTCAATTCCCAACATGGATTACACTGTCCCTTAATAATCTT
AGAGTTCTTACACTAAGTGAGTGCTTTCATTGCACCTTTTTGCCACCTTTAGGTAAGTTG
CCATTTCTTGAAATTCTTTGGATAAGGCTTATGGATGAATTGAAACATGTAGGAAATGAA
TTCTTGGGCTTGCCAGGAACCATTAACACATTTCCAAAGTTGAAGAAATTGAGATTTTCA
TATTGTTCAGAGTGGGAAGAATGGACAGACATAAAACCAGAAGTTGGTTTTTCAGTAATG
CCTAGTCTTAAGGAGTTAGAATTAAATTGTTGTGAAAAGCTTAATAGCCTTCCATATTGT
CTCCTACAAAGAGTGTCATCACTAGAGTCTTTGAAGATCGAGATGTGTCCTTGTCTTGAA
CTTGATTGGACTGAGATAACTCATATTCAGAACATTGAAACTGATGATGGGATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056156
PEP Infomation

pacid=37458214 transcript=PGSC0003DMT400083909 locus=PGSC0003DMG400033651 ID=PGSC0003DMT400083909.v4.03 annot-version=v4.03
Sequence

MAEVLVSIVLEQLGTFIVEQVKEHVKEQVEELKMAIGIKKEIENLSLKLKMIRAALDDAE
RRRVKDIYVKHWLEVLEIFSYDADNVLDEWRTRILQQQIERDESVADAGSGAAVSIPKKK
VSCFSLSCCFTFKKLEVNRDIVRKIKELDVKLEEIVRDKDQFNFVVNATGGGGSVSDQDA
FRRVMSTGIVDESEVHGRDSDKDVVMRKLLESSDQESVPLVVSVVGTGGIGKTTLAQLAY
SDEELKGHFDKRIWICVSDPFDEVKVAKAILEGLTKSSPNLSEFHMLLERIQECVSKKRF
FLVLDDVWSEDYSKWEPLKNSLKNGAPGSRILVTSRSERVVGIMDSSYMHRLGQLSDSDC
WALFSRIAFSGRSNEDRENLEDIGRRIVRKCKGLPLAAKAMGSFLRFKVTEQEWQTVLDN
QIWEQEEVTLDLFPHLYLSYNDLLPILKRCFSYCAIFPKDTVINVDKLVRIWMAQGYLST
VENNQQEVRGREYFMNLAMRSFFQELETDDKNTSVIISCKMHDVVHDFAQLISKNDCYSI
TGTESTEKVLSVHHLCWERTDSTVTPVSVCDVEKIRSLFAEHLLAKELTHDLVKGLKCLR
VLNLHGCGIQELPQEIGNLFHLRYIDLSSSQVQNLPEAICRLCNLQTLDLQGCKRLSRLP
QHIGRLINLRHLITTDTPKLESFPQDIGNLAQLRTLSDFVVGKGSSKLGYIGKLNQLQGY
VSIHVIDSLNAAEDLVEAQNAALRMKPYIKELRLNFYWASEVSMDVMEALIPPPNLRFLT
INGYRGTQFPTWITLSLNNLRVLTLSECFHCTFLPPLGKLPFLEILWIRLMDELKHVGNE
FLGLPGTINTFPKLKKLRFSYCSEWEEWTDIKPEVGFSVMPSLKELELNCCEKLNSLPYC
LLQRVSSLESLKIEMCPCLELDWTEITHIQNIETDDGM*

Transcript Sequence

Transcript ID

PGSC0003DMT400083909
Transcript Infomation

pacid=37458214 locus=PGSC0003DMG400033651 ID=PGSC0003DMT400083909.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGTACTCGTCTCCATTGTGCTTGAACAATTGGGCACTTTCATTGTGGAACAA
GTTAAAGAACACGTTAAAGAACAAGTAGAAGAGCTGAAAATGGCTATTGGGATCAAGAAA
GAGATCGAAAATTTATCTTTGAAGTTGAAAATGATAAGAGCAGCATTGGATGATGCAGAG
AGAAGAAGGGTCAAAGATATATATGTTAAGCATTGGTTAGAAGTTCTTGAAATTTTCTCT
TATGATGCAGACAATGTGTTAGATGAATGGCGCACAAGAATACTCCAGCAACAAATTGAA
AGAGATGAGTCTGTTGCTGATGCTGGTTCTGGTGCTGCTGTTTCGATTCCTAAGAAGAAA
GTAAGTTGCTTTTCACTGTCTTGTTGTTTTACTTTCAAGAAACTTGAGGTTAATCGCGAT
ATTGTTCGTAAAATAAAGGAATTGGATGTGAAGTTAGAAGAGATTGTGAGGGATAAAGAT
CAGTTCAATTTTGTAGTTAATGCAACTGGTGGTGGTGGTAGTGTTTCTGATCAAGATGCG
TTTAGAAGAGTTATGAGTACGGGTATTGTTGATGAATCAGAAGTACATGGTAGGGATTCT
GATAAAGATGTTGTAATGAGGAAGTTGCTTGAGAGTAGTGATCAAGAAAGTGTCCCTCTT
GTTGTTTCTGTTGTGGGTACAGGTGGGATTGGAAAAACAACACTTGCCCAACTAGCTTAT
AGTGATGAGGAATTGAAGGGTCATTTCGATAAAAGAATTTGGATTTGTGTATCTGATCCT
TTCGATGAAGTCAAAGTTGCAAAAGCTATTCTTGAAGGGTTAACTAAAAGCTCTCCGAAT
CTGTCTGAGTTCCATATGTTGTTAGAAAGAATTCAAGAATGTGTCTCTAAGAAAAGGTTC
TTTCTTGTGCTAGATGATGTGTGGTCTGAAGATTATTCTAAATGGGAACCGTTGAAGAAC
TCCCTCAAGAATGGAGCTCCTGGAAGTAGAATCTTGGTTACATCCCGGAGTGAGAGGGTT
GTGGGGATTATGGACAGTTCTTACATGCATAGGTTGGGACAGCTATCAGATTCAGATTGC
TGGGCATTGTTTAGTCGGATAGCATTTTCAGGAAGGAGTAACGAGGATCGTGAGAATTTA
GAAGATATTGGAAGGAGAATTGTTCGAAAATGCAAAGGATTGCCACTTGCTGCAAAGGCT
ATGGGAAGTTTCCTACGTTTTAAGGTTACAGAACAAGAGTGGCAAACTGTTTTGGACAAT
CAAATATGGGAACAGGAAGAAGTGACATTAGACCTTTTTCCTCATTTGTACTTGAGCTAC
AATGACTTGCTCCCAATCCTGAAGCGTTGTTTCTCATATTGTGCCATTTTTCCTAAAGAT
ACTGTCATAAATGTAGACAAGTTGGTCAGAATTTGGATGGCACAAGGTTATCTCAGCACA
GTTGAAAATAACCAGCAGGAAGTTAGAGGACGCGAGTACTTCATGAACTTAGCTATGCGC
TCTTTCTTTCAGGAGTTGGAGACAGATGATAAAAATACAAGTGTGATAATATCTTGCAAA
ATGCATGATGTTGTGCATGATTTTGCTCAGTTAATTTCAAAAAATGACTGCTATAGCATC
ACAGGGACCGAAAGCACAGAAAAAGTTCTTAGTGTTCATCATTTATGCTGGGAGAGAACT
GACAGTACAGTAACTCCTGTTTCTGTCTGTGATGTTGAAAAGATCCGCAGTCTTTTTGCT
GAACACTTGCTCGCGAAAGAGCTTACTCACGATCTGGTCAAAGGTCTTAAATGTCTAAGA
GTTCTAAATTTACATGGCTGTGGAATACAAGAACTCCCTCAAGAAATCGGCAATCTGTTC
CATCTGAGGTACATTGATTTAAGCAGCAGCCAAGTACAGAACTTGCCTGAAGCCATTTGC
CGGTTGTGTAATCTGCAAACGTTAGATCTTCAAGGATGTAAGCGTCTTTCAAGACTTCCT
CAACATATAGGAAGACTGATAAACTTGAGACACCTCATTACAACTGACACACCCAAGTTG
GAATCTTTTCCTCAAGATATCGGAAATCTAGCTCAGCTCAGGACTTTGAGTGACTTTGTA
GTTGGGAAAGGATCAAGCAAGCTAGGATATATCGGAAAATTGAACCAGCTTCAAGGGTAT
GTATCTATCCATGTGATCGACAGTTTGAACGCTGCAGAAGACCTAGTTGAAGCACAAAAT
GCAGCATTAAGAATGAAGCCATACATCAAGGAACTACGTTTGAATTTCTACTGGGCAAGT
GAGGTAAGTATGGATGTGATGGAAGCTCTAATACCACCTCCAAACCTTAGATTCTTGACC
ATCAACGGATACAGAGGCACTCAATTCCCAACATGGATTACACTGTCCCTTAATAATCTT
AGAGTTCTTACACTAAGTGAGTGCTTTCATTGCACCTTTTTGCCACCTTTAGGTAAGTTG
CCATTTCTTGAAATTCTTTGGATAAGGCTTATGGATGAATTGAAACATGTAGGAAATGAA
TTCTTGGGCTTGCCAGGAACCATTAACACATTTCCAAAGTTGAAGAAATTGAGATTTTCA
TATTGTTCAGAGTGGGAAGAATGGACAGACATAAAACCAGAAGTTGGTTTTTCAGTAATG
CCTAGTCTTAAGGAGTTAGAATTAAATTGTTGTGAAAAGCTTAATAGCCTTCCATATTGT
CTCCTACAAAGAGTGTCATCACTAGAGTCTTTGAAGATCGAGATGTGTCCTTGTCTTGAA
CTTGATTGGACTGAGATAACTCATATTCAGAACATTGAAACTGATGATGGGATGTGA