Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083908
CDS Infomation

pacid=37468156 polypeptide=PGSC0003DMP400056155 locus=PGSC0003DMG400033650 ID=PGSC0003DMT400083908.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAAACCAGGGATTCTGACCGAATGGCCATGGACATGGCTTGGGAATTTCAAG
TACGTTGTTTTGGCACCATTTGTGGGACGTAGCATTCAGTCATTGTTGAACAGAGAAGAT
GGAAGCAAGATAGATATTGGATACTTAATTATATTTCCATTTCTCCTATTCCGGATGCTT
CACAACCAAATATGGATATCCTTGTCCAGATACAGAACTGCAAAGGGTGATAATCGAATT
CTTGATAAGACCATTGAATTTGACCAAGTTGACAGAGAAAGAAATTGGGATGATCAAATC
CTACTTAATGGACTATTGTTCTATTATGGATACATGAAGTTGGAGCAGTCTCATTACCTT
CCTATATGGAGGAGTGATGGTATCATTTTGACAACATTGCTTCATATTGGTCCTGTCGAA
TTTCTCTATTATTGGCTTCACAGAGCTTTACACCACCACTTTCTTTACTCTCGTTACCAT
TCACATCACCATTCATCCATTGTAACTGAACCCATTACTTCTGTGATTCATCCATTTGCA
GAGCACATAGCATACTTCTTGCTATTTTCCATACCACTACTCACAACTGTGCTAACAAAG
ACTGCTTCAATAGTTTCATTTGGTGGATATATCACTTATATTGATTTTATGAACAATATG
GGCCATTGCAACTTTGAGATCATTCCCAAGTGGATGTTCTCTACTTTCCCTCCTCTCAAA
TATTTGATGTATACACCATCGTACCATTCACTACATCATACTCAATTTAGGACAAATTAC
TCACTATTCATGCCAATATATGATTACATCTATGGTACATTGGACAAATCATCAGACACA
TTATATGAAAAATCACTTGAAAGGCAAGGGAAATCACCAGATGTTGTACATTTAACACAT
CTAACAACACCAGAATCCATTTACCATCTCAGGCTAGGATTTGCTTCTTTCGCCTCGGAA
CCCTACACCTCTAAGTGGTATTTCTGGTTAATGTGGCCTATCACATTGTGGTCTATGATG
GTTACTTGGATTTATGGTCACACATTTACTGTTGAGAGAAATGTATTCAAGAATCTCAAT
TTGCAAACTTGGGCCATTCCAAAATATCGTGTACAGTACTTTATGCAATGGCAAAGAGAG
ACGATTAATAACTTAATTGAAGAAGCTATCATGGAAGCAGATAAAAAAGGCATAAAAGTT
TTGAGCCTTGGACTCTTAAATCAGGATGAGAAACTGAATAACAATGGGGAGGTTTACATA
AGAAGGCACCCTCAAATAAAAGTAAAGTTGGTGGATGGAAGTAGCCTAGCTGTTGCTGTG
GTCCTAAATTCAATTCCCAAAGGAACTACCCAAGTGGTCCTTGGAGGCCAGTTGTCAAAA
GTTGCTAATGCCATTGCCCTTGCTTTATGCCAAGGAGGAGTAAAGGTCATGGCATTGAGA
GAAGAAGAGTACAAAAAGCTCAAATCAAATCTTACTACTGAAGCAGCAATTAATTTACTT
CCCTCAAAAACATATAATTCAAAGATATGGCTAGTAGGGGATGGATTAAATGAAGATGAA
CAATTGAAAGCACCAAAAGGAACACTTTTCATTCCATTTTCACAATTCCCACCAAGAAAA
ACTCGCAAGGATTGCTTCTACTTTCACACACCGGCAATGATTACTCCAAAACACTTTGAA
AATGTGGATTCTTGCGAGAATTGGCTGCCAAGAAGAGTGATGAGCGCTTGGCGTATGGCA
GGAATTCTACATGCACTTGAAGATTGGCAAGAACATGAGTGCGGGAACATGATGTTTGAC
ATAGAGAAAGTGTGGAAAGCAAGTCTTGTTCATGGTTTTCAGCCAATATCTGTGGTTTCT
GCTTCTGAATCAAAGGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400056155
PEP Infomation

pacid=37468156 transcript=PGSC0003DMT400083908 locus=PGSC0003DMG400033650 ID=PGSC0003DMT400083908.v4.03 annot-version=v4.03
Sequence

MASKPGILTEWPWTWLGNFKYVVLAPFVGRSIQSLLNREDGSKIDIGYLIIFPFLLFRML
HNQIWISLSRYRTAKGDNRILDKTIEFDQVDRERNWDDQILLNGLLFYYGYMKLEQSHYL
PIWRSDGIILTTLLHIGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFA
EHIAYFLLFSIPLLTTVLTKTASIVSFGGYITYIDFMNNMGHCNFEIIPKWMFSTFPPLK
YLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTLDKSSDTLYEKSLERQGKSPDVVHLTH
LTTPESIYHLRLGFASFASEPYTSKWYFWLMWPITLWSMMVTWIYGHTFTVERNVFKNLN
LQTWAIPKYRVQYFMQWQRETINNLIEEAIMEADKKGIKVLSLGLLNQDEKLNNNGEVYI
RRHPQIKVKLVDGSSLAVAVVLNSIPKGTTQVVLGGQLSKVANAIALALCQGGVKVMALR
EEEYKKLKSNLTTEAAINLLPSKTYNSKIWLVGDGLNEDEQLKAPKGTLFIPFSQFPPRK
TRKDCFYFHTPAMITPKHFENVDSCENWLPRRVMSAWRMAGILHALEDWQEHECGNMMFD
IEKVWKASLVHGFQPISVVSASESKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400083908
Transcript Infomation

pacid=37468156 locus=PGSC0003DMG400033650 ID=PGSC0003DMT400083908.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAAACCAGGGATTCTGACCGAATGGCCATGGACATGGCTTGGGAATTTCAAG
TACGTTGTTTTGGCACCATTTGTGGGACGTAGCATTCAGTCATTGTTGAACAGAGAAGAT
GGAAGCAAGATAGATATTGGATACTTAATTATATTTCCATTTCTCCTATTCCGGATGCTT
CACAACCAAATATGGATATCCTTGTCCAGATACAGAACTGCAAAGGGTGATAATCGAATT
CTTGATAAGACCATTGAATTTGACCAAGTTGACAGAGAAAGAAATTGGGATGATCAAATC
CTACTTAATGGACTATTGTTCTATTATGGATACATGAAGTTGGAGCAGTCTCATTACCTT
CCTATATGGAGGAGTGATGGTATCATTTTGACAACATTGCTTCATATTGGTCCTGTCGAA
TTTCTCTATTATTGGCTTCACAGAGCTTTACACCACCACTTTCTTTACTCTCGTTACCAT
TCACATCACCATTCATCCATTGTAACTGAACCCATTACTTCTGTGATTCATCCATTTGCA
GAGCACATAGCATACTTCTTGCTATTTTCCATACCACTACTCACAACTGTGCTAACAAAG
ACTGCTTCAATAGTTTCATTTGGTGGATATATCACTTATATTGATTTTATGAACAATATG
GGCCATTGCAACTTTGAGATCATTCCCAAGTGGATGTTCTCTACTTTCCCTCCTCTCAAA
TATTTGATGTATACACCATCGTACCATTCACTACATCATACTCAATTTAGGACAAATTAC
TCACTATTCATGCCAATATATGATTACATCTATGGTACATTGGACAAATCATCAGACACA
TTATATGAAAAATCACTTGAAAGGCAAGGGAAATCACCAGATGTTGTACATTTAACACAT
CTAACAACACCAGAATCCATTTACCATCTCAGGCTAGGATTTGCTTCTTTCGCCTCGGAA
CCCTACACCTCTAAGTGGTATTTCTGGTTAATGTGGCCTATCACATTGTGGTCTATGATG
GTTACTTGGATTTATGGTCACACATTTACTGTTGAGAGAAATGTATTCAAGAATCTCAAT
TTGCAAACTTGGGCCATTCCAAAATATCGTGTACAGTACTTTATGCAATGGCAAAGAGAG
ACGATTAATAACTTAATTGAAGAAGCTATCATGGAAGCAGATAAAAAAGGCATAAAAGTT
TTGAGCCTTGGACTCTTAAATCAGGATGAGAAACTGAATAACAATGGGGAGGTTTACATA
AGAAGGCACCCTCAAATAAAAGTAAAGTTGGTGGATGGAAGTAGCCTAGCTGTTGCTGTG
GTCCTAAATTCAATTCCCAAAGGAACTACCCAAGTGGTCCTTGGAGGCCAGTTGTCAAAA
GTTGCTAATGCCATTGCCCTTGCTTTATGCCAAGGAGGAGTAAAGGTCATGGCATTGAGA
GAAGAAGAGTACAAAAAGCTCAAATCAAATCTTACTACTGAAGCAGCAATTAATTTACTT
CCCTCAAAAACATATAATTCAAAGATATGGCTAGTAGGGGATGGATTAAATGAAGATGAA
CAATTGAAAGCACCAAAAGGAACACTTTTCATTCCATTTTCACAATTCCCACCAAGAAAA
ACTCGCAAGGATTGCTTCTACTTTCACACACCGGCAATGATTACTCCAAAACACTTTGAA
AATGTGGATTCTTGCGAGAATTGGCTGCCAAGAAGAGTGATGAGCGCTTGGCGTATGGCA
GGAATTCTACATGCACTTGAAGATTGGCAAGAACATGAGTGCGGGAACATGATGTTTGAC
ATAGAGAAAGTGTGGAAAGCAAGTCTTGTTCATGGTTTTCAGCCAATATCTGTGGTTTCT
GCTTCTGAATCAAAGGCTTAA