Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083907
CDS Infomation

pacid=37468157 polypeptide=PGSC0003DMP400056154 locus=PGSC0003DMG400033650 ID=PGSC0003DMT400083907.v4.03 annot-version=v4.03
Sequence

ATGCTTCACAACCAAATATGGATATCCTTGTCCAGATACAGAACTGCAAAGGGTGATAAT
CGAATTCTTGATAAGACCATTGAATTTGACCAAGTTGACAGAGAAAGAAATTGGGATGAT
CAAATCCTACTTAATGGACTATTGTTCTATTATGGATACATGAAGTTGGAGCAGTCTCAT
TACCTTCCTATATGGAGGAGTGATGGTATCATTTTGACAACATTGCTTCATATTGGTCCT
GTCGAATTTCTCTATTATTGGCTTCACAGAGCTTTACACCACCACTTTCTTTACTCTCGT
TACCATTCACATCACCATTCATCCATTGTAACTGAACCCATTACTTCTGTGATTCATCCA
TTTGCAGAGCACATAGCATACTTCTTGCTATTTTCCATACCACTACTCACAACTGTGCTA
ACAAAGACTGCTTCAATAGTTTCATTTGGTGGATATATCACTTATATTGATTTTATGAAC
AATATGGGCCATTGCAACTTTGAGATCATTCCCAAGTGGATGTTCTCTACTTTCCCTCCT
CTCAAATATTTGATGTATACACCATCGTACCATTCACTACATCATACTCAATTTAGGACA
AATTACTCACTATTCATGCCAATATATGATTACATCTATGGTACATTGGACAAATCATCA
GACACATTATATGAAAAATCACTTGAAAGGCAAGGGAAATCACCAGATGTTGTACATTTA
ACACATCTAACAACACCAGAATCCATTTACCATCTCAGGCTAGGATTTGCTTCTTTCGCC
TCGGAACCCTACACCTCTAAGTGGTATTTCTGGTTAATGTGGCCTATCACATTGTGGTCT
ATGATGGTTACTTGGATTTATGGTCACACATTTACTGTTGAGAGAAATGTATTCAAGAAT
CTCAATTTGCAAACTTGGGCCATTCCAAAATATCGTGTACAGTACTTTATGCAATGGCAA
AGAGAGACGATTAATAACTTAATTGAAGAAGCTATCATGGAAGCAGATAAAAAAGGCATA
AAAGTTTTGAGCCTTGGACTCTTAAATCAGGATGAGAAACTGAATAACAATGGGGAGGTT
TACATAAGAAGGCACCCTCAAATAAAAGTAAAGTTGGTGGATGGAAGTAGCCTAGCTGTT
GCTGTGGTCCTAAATTCAATTCCCAAAGGAACTACCCAAGTGGTCCTTGGAGGCCAGTTG
TCAAAAGTTGCTAATGCCATTGCCCTTGCTTTATGCCAAGGAGGAGTAAAGGTCATGGCA
TTGAGAGAAGAAGAGTACAAAAAGCTCAAATCAAATCTTACTACTGAAGCAGCAATTAAT
TTACTTCCCTCAAAAACATATAATTCAAAGGTACAAATGATAAAATCAATGGAAAAGATT
GTTTACCTTACTACCTCGTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400056154
PEP Infomation

pacid=37468157 transcript=PGSC0003DMT400083907 locus=PGSC0003DMG400033650 ID=PGSC0003DMT400083907.v4.03 annot-version=v4.03
Sequence

MLHNQIWISLSRYRTAKGDNRILDKTIEFDQVDRERNWDDQILLNGLLFYYGYMKLEQSH
YLPIWRSDGIILTTLLHIGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHP
FAEHIAYFLLFSIPLLTTVLTKTASIVSFGGYITYIDFMNNMGHCNFEIIPKWMFSTFPP
LKYLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTLDKSSDTLYEKSLERQGKSPDVVHL
THLTTPESIYHLRLGFASFASEPYTSKWYFWLMWPITLWSMMVTWIYGHTFTVERNVFKN
LNLQTWAIPKYRVQYFMQWQRETINNLIEEAIMEADKKGIKVLSLGLLNQDEKLNNNGEV
YIRRHPQIKVKLVDGSSLAVAVVLNSIPKGTTQVVLGGQLSKVANAIALALCQGGVKVMA
LREEEYKKLKSNLTTEAAINLLPSKTYNSKVQMIKSMEKIVYLTTSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400083907
Transcript Infomation

pacid=37468157 locus=PGSC0003DMG400033650 ID=PGSC0003DMT400083907.v4.03 annot-version=v4.03
Sequence

ATGCTTCACAACCAAATATGGATATCCTTGTCCAGATACAGAACTGCAAAGGGTGATAAT
CGAATTCTTGATAAGACCATTGAATTTGACCAAGTTGACAGAGAAAGAAATTGGGATGAT
CAAATCCTACTTAATGGACTATTGTTCTATTATGGATACATGAAGTTGGAGCAGTCTCAT
TACCTTCCTATATGGAGGAGTGATGGTATCATTTTGACAACATTGCTTCATATTGGTCCT
GTCGAATTTCTCTATTATTGGCTTCACAGAGCTTTACACCACCACTTTCTTTACTCTCGT
TACCATTCACATCACCATTCATCCATTGTAACTGAACCCATTACTTCTGTGATTCATCCA
TTTGCAGAGCACATAGCATACTTCTTGCTATTTTCCATACCACTACTCACAACTGTGCTA
ACAAAGACTGCTTCAATAGTTTCATTTGGTGGATATATCACTTATATTGATTTTATGAAC
AATATGGGCCATTGCAACTTTGAGATCATTCCCAAGTGGATGTTCTCTACTTTCCCTCCT
CTCAAATATTTGATGTATACACCATCGTACCATTCACTACATCATACTCAATTTAGGACA
AATTACTCACTATTCATGCCAATATATGATTACATCTATGGTACATTGGACAAATCATCA
GACACATTATATGAAAAATCACTTGAAAGGCAAGGGAAATCACCAGATGTTGTACATTTA
ACACATCTAACAACACCAGAATCCATTTACCATCTCAGGCTAGGATTTGCTTCTTTCGCC
TCGGAACCCTACACCTCTAAGTGGTATTTCTGGTTAATGTGGCCTATCACATTGTGGTCT
ATGATGGTTACTTGGATTTATGGTCACACATTTACTGTTGAGAGAAATGTATTCAAGAAT
CTCAATTTGCAAACTTGGGCCATTCCAAAATATCGTGTACAGTACTTTATGCAATGGCAA
AGAGAGACGATTAATAACTTAATTGAAGAAGCTATCATGGAAGCAGATAAAAAAGGCATA
AAAGTTTTGAGCCTTGGACTCTTAAATCAGGATGAGAAACTGAATAACAATGGGGAGGTT
TACATAAGAAGGCACCCTCAAATAAAAGTAAAGTTGGTGGATGGAAGTAGCCTAGCTGTT
GCTGTGGTCCTAAATTCAATTCCCAAAGGAACTACCCAAGTGGTCCTTGGAGGCCAGTTG
TCAAAAGTTGCTAATGCCATTGCCCTTGCTTTATGCCAAGGAGGAGTAAAGGTCATGGCA
TTGAGAGAAGAAGAGTACAAAAAGCTCAAATCAAATCTTACTACTGAAGCAGCAATTAAT
TTACTTCCCTCAAAAACATATAATTCAAAGGTACAAATGATAAAATCAATGGAAAAGATT
GTTTACCTTACTACCTCGTCTTAA