Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083878
CDS Infomation

pacid=37448694 polypeptide=PGSC0003DMP400056130 locus=PGSC0003DMG400033639 ID=PGSC0003DMT400083878.v4.03 annot-version=v4.03
Sequence

ATGAGTCGCTACGACAGCCGTCCGGCCGACCCTGGCTCTTACCGTGACCGTCGCAGTGAT
TCAGGCTTCGGTGGGGGCTCAAATTATAGGTCATCATCATCGAGCAGGAGAGATTCCGAG
GGTAAGGAGTCTCCACGGAAGGTTAATTTGGATGATTTGACTCCATTCGAGAAGAATTTC
TATGTTGAATCACCATCCATAGCAGCAATGACTGAAGGTGAGGTGGAAGAGTATAGACTA
CGACGGGAGATCACTATTGAGGGTCGTGATGTGCCCAAGCCTATAAAGTCCTTTCATGAC
ATAGGATTTCCAGATTATGTCTTGCAAGAAATTGAAAAGGCTGGCTTCACTGAACCTACA
CCTATTCAAGCTCAAGGTTGGCCTATGGCCTTGAAGGGTCGTGATCTCATTGGTATAGCA
GAAACAGGGTCTGGGAAGACAATTGCTTATCTGTTGCCTGCAATTGTGCACGTTAATGCC
CAGCCCATTTTAGATCATGGAGATGGTCCAATTGTCTTAGTGTTAGCCCCAACTCGTGAA
CTTGCTGTTCAGATTCAACAAGAAGCTACAAAATTTGGTGCATCATCACGGATTAAGAAT
ACCTGCATTTATGGTGGGGTTCCAAAAGGGCCCCAAGTTCGTGATCTTCAGAAAGGTGTT
GAAATTGTTATTGCCACACCTGGAAGGTTGATTGATATGTTAGAATCTAATCATACAAAC
CTGCGAAGAGTGACATATCTTGTGCTGGATGAGGCTGACCGCATGCTAGACATGGGTTTT
GAACCTCAGATCCGCAAAATTGTTTCTCAGATTCGCCCAGATCGTCAAACGCTGTATTGG
AGTGCCACATGGCCCAAAGAAGTTGAGCAGCTTGCAAGACAATTCCTTTTCAATGCATAC
AAAGTAATTATTGGTTCAGCTGACCTGAAAGCTAATCATGCTATTCGCCAGCATGTGGAA
ATCGTCTCGGAGAGCCAGAAGTATAATAAATTAGTAAAGTTGCTGGAAGATATTATGGAT
GGTAGTCGTATTTTAATATTCATGGACACCAAAAAGGGGTGTGACCAAGTAACTCGGCAG
CTCCGGATGGATGGGTGGCCTGCACTTTCTATTCATGGTGATAAGAGTCAAGCAGAAAGA
GATTGGGTCCTTTCAGAATTCAAAGCTGGAAAGTCTCCTATAATGACAGCTACAGATGTT
GCTGCTCGAGGTCTAGATGTGAAGGATGTAAAATTTGTAATCAACTATGATTTTCCTGGA
TCATTGGAGGACTATGTTCATCGCATTGGTAGAACGGGAAGGGCTGGTGCCTCAGGGACA
GCATACACATTCTTTACTGCAGCAAATGCTAGGTTTGCAAAGGATCTTGTTAACATTCTT
GAGGAGGCCGGACAGAAAGTCGGTCCTGAATTGGCAAAAATGGGACGTGGTGCGCCTCCC
CCTCCTGGTCACGGAGGGTTTCGAGACCGCGGAAGGGGTTACGGAGGCAATAAGCAGTGG
AGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400056130
PEP Infomation

pacid=37448694 transcript=PGSC0003DMT400083878 locus=PGSC0003DMG400033639 ID=PGSC0003DMT400083878.v4.03 annot-version=v4.03
Sequence

MSRYDSRPADPGSYRDRRSDSGFGGGSNYRSSSSSRRDSEGKESPRKVNLDDLTPFEKNF
YVESPSIAAMTEGEVEEYRLRREITIEGRDVPKPIKSFHDIGFPDYVLQEIEKAGFTEPT
PIQAQGWPMALKGRDLIGIAETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRE
LAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTN
LRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLFNAY
KVIIGSADLKANHAIRQHVEIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQVTRQ
LRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPG
SLEDYVHRIGRTGRAGASGTAYTFFTAANARFAKDLVNILEEAGQKVGPELAKMGRGAPP
PPGHGGFRDRGRGYGGNKQWS*

Transcript Sequence

Transcript ID

PGSC0003DMT400083878
Transcript Infomation

pacid=37448694 locus=PGSC0003DMG400033639 ID=PGSC0003DMT400083878.v4.03 annot-version=v4.03
Sequence

ATGAGTCGCTACGACAGCCGTCCGGCCGACCCTGGCTCTTACCGTGACCGTCGCAGTGAT
TCAGGCTTCGGTGGGGGCTCAAATTATAGGTCATCATCATCGAGCAGGAGAGATTCCGAG
GGTAAGGAGTCTCCACGGAAGGTTAATTTGGATGATTTGACTCCATTCGAGAAGAATTTC
TATGTTGAATCACCATCCATAGCAGCAATGACTGAAGGTGAGGTGGAAGAGTATAGACTA
CGACGGGAGATCACTATTGAGGGTCGTGATGTGCCCAAGCCTATAAAGTCCTTTCATGAC
ATAGGATTTCCAGATTATGTCTTGCAAGAAATTGAAAAGGCTGGCTTCACTGAACCTACA
CCTATTCAAGCTCAAGGTTGGCCTATGGCCTTGAAGGGTCGTGATCTCATTGGTATAGCA
GAAACAGGGTCTGGGAAGACAATTGCTTATCTGTTGCCTGCAATTGTGCACGTTAATGCC
CAGCCCATTTTAGATCATGGAGATGGTCCAATTGTCTTAGTGTTAGCCCCAACTCGTGAA
CTTGCTGTTCAGATTCAACAAGAAGCTACAAAATTTGGTGCATCATCACGGATTAAGAAT
ACCTGCATTTATGGTGGGGTTCCAAAAGGGCCCCAAGTTCGTGATCTTCAGAAAGGTGTT
GAAATTGTTATTGCCACACCTGGAAGGTTGATTGATATGTTAGAATCTAATCATACAAAC
CTGCGAAGAGTGACATATCTTGTGCTGGATGAGGCTGACCGCATGCTAGACATGGGTTTT
GAACCTCAGATCCGCAAAATTGTTTCTCAGATTCGCCCAGATCGTCAAACGCTGTATTGG
AGTGCCACATGGCCCAAAGAAGTTGAGCAGCTTGCAAGACAATTCCTTTTCAATGCATAC
AAAGTAATTATTGGTTCAGCTGACCTGAAAGCTAATCATGCTATTCGCCAGCATGTGGAA
ATCGTCTCGGAGAGCCAGAAGTATAATAAATTAGTAAAGTTGCTGGAAGATATTATGGAT
GGTAGTCGTATTTTAATATTCATGGACACCAAAAAGGGGTGTGACCAAGTAACTCGGCAG
CTCCGGATGGATGGGTGGCCTGCACTTTCTATTCATGGTGATAAGAGTCAAGCAGAAAGA
GATTGGGTCCTTTCAGAATTCAAAGCTGGAAAGTCTCCTATAATGACAGCTACAGATGTT
GCTGCTCGAGGTCTAGATGTGAAGGATGTAAAATTTGTAATCAACTATGATTTTCCTGGA
TCATTGGAGGACTATGTTCATCGCATTGGTAGAACGGGAAGGGCTGGTGCCTCAGGGACA
GCATACACATTCTTTACTGCAGCAAATGCTAGGTTTGCAAAGGATCTTGTTAACATTCTT
GAGGAGGCCGGACAGAAAGTCGGTCCTGAATTGGCAAAAATGGGACGTGGTGCGCCTCCC
CCTCCTGGTCACGGAGGGTTTCGAGACCGCGGAAGGGGTTACGGAGGCAATAAGCAGTGG
AGCTAG