Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083841
CDS Infomation

pacid=37469533 polypeptide=PGSC0003DMP400056109 locus=PGSC0003DMG400033623 ID=PGSC0003DMT400083841.v4.03 annot-version=v4.03
Sequence

ATGGCTGGAGGAGATGCAAGTTCAAGGGAATTAGATCAAACACCTACATGGGCTGTGGCT
TTGGTTTGTGCTGTTATTGTTCTTATTTCCATTTTATTGGAAAAGGTTCTTCATAAAGTT
GGACAGACATTTGAGAGGAGACGAAAAAGTGCATTGGTGGAAGCATTGGAGAAGATTAAG
GCTGAGCTTATGGTTCTTGGTTTTATATCGTTGCTTCTGACGTTCGGACAAAATTACATA
TCGCGAATATGCATACCTGAAAGGGTTGCAGACACAATGTTGCCATGCCCTGCCCAACAA
CACGCACGTTTGGGATATGGAGGAGGACATCATGCACCTGGACAAGGTCATCATCAACCA
CCTGGTACCGGAGAAGCTCATCGAAGGCTTCTATCAGACCATAGGATATTAGCAGCTGAT
AGTCCTGCAGAAACCTGCAGGCCGGGACAAGTTCCACTTATATCCACCCATGGTTTGCAT
CAGCTGCACATTTTCATATTCTTTTTAGCCGTCTTCCACGTTATTTACAGTGCCATAACA
ATGCTGCTCGGAAGATTAAAGATTCGTGAGTGGAAGGAATGGGAAAGGCAAGTTGAGCAT
GAGTATGAAGCATCCAATGATGCCTCAAGATTCAGGCTTACCAAAGAGACATCTTTTGTT
AGGGATAATACGAGTTTTGGAACCACCCCAATCATTTTCTACAGTGTGTGCTTTTTTAGG
CAATTTTTCAGGTCAGTTAGGAAAGCTGACTACTTGACCATGCGCCACGGTTTCATCACG
GTCCATTTAGCACCTGGAAGTAAGTTTAATTTTCAAAAGTACATAAAAAGATCCTTGGAA
GATGATTTCAAGGTTATTGTGGGAATCAATTCACTGCTATGGTTTTCTGCAGTTGTTTAT
CTTCTGTTGAATGTCCACGGATGGCAAGCTATGTTTTGGCTGTCCATACTGCCTTTAGTT
ATAATCTTAGCAGTTGGCACAAAACTTCAAGCAATTATAGCTCAGATGGCTCTTGAAATT
CAAGAAAGACATGCTGTAGTCCAAGGCATACCTCTTGTTCAAATTTCAGATAGAAATTTT
TGGTTTGGAAAGCCCACTCTAATTCTTCATCTTGTCCATCTCACCCTCTTTCAGAATGCT
TTCGAGATAACTTATTTCCTTTGGATAACATATGAATTTGGGCTCCATTCCTGTTTTCAC
GATAATTTTTACCTCGCCTTATTGAGAGTTGCTATCGGGTTAGGTGTTCAGATTTTGTGC
AGCTACATTACACTTCCACTGTATGCTCTTGTTACCCAGATGGGATCAACCATGAAGAGA
TCAATATTTGATGATCAAACTTCCAAGGCACTAATGAATTGGCATAAGAATGCAAAAAAG
AGGAGACCTACAAAGCCTGGACCAATAGAAACACGAAAATTAGGGAGTCCAGGGGAATCA
CCTGAAACTTCCCCGACTACAAAAGGTGGTCTCGGATCAAGAAGAAAAATGTCTCAAGTA
GAGCCGTTGTCCTCTAATCAGACAGCCAACATTGTTGCTAGCGTTGACATTCCAGAGGAA
AAGCCTCCCGCGAACCCTGACCTACTTACAGGTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056109
PEP Infomation

pacid=37469533 transcript=PGSC0003DMT400083841 locus=PGSC0003DMG400033623 ID=PGSC0003DMT400083841.v4.03 annot-version=v4.03
Sequence

MAGGDASSRELDQTPTWAVALVCAVIVLISILLEKVLHKVGQTFERRRKSALVEALEKIK
AELMVLGFISLLLTFGQNYISRICIPERVADTMLPCPAQQHARLGYGGGHHAPGQGHHQP
PGTGEAHRRLLSDHRILAADSPAETCRPGQVPLISTHGLHQLHIFIFFLAVFHVIYSAIT
MLLGRLKIREWKEWERQVEHEYEASNDASRFRLTKETSFVRDNTSFGTTPIIFYSVCFFR
QFFRSVRKADYLTMRHGFITVHLAPGSKFNFQKYIKRSLEDDFKVIVGINSLLWFSAVVY
LLLNVHGWQAMFWLSILPLVIILAVGTKLQAIIAQMALEIQERHAVVQGIPLVQISDRNF
WFGKPTLILHLVHLTLFQNAFEITYFLWITYEFGLHSCFHDNFYLALLRVAIGLGVQILC
SYITLPLYALVTQMGSTMKRSIFDDQTSKALMNWHKNAKKRRPTKPGPIETRKLGSPGES
PETSPTTKGGLGSRRKMSQVEPLSSNQTANIVASVDIPEEKPPANPDLLTGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400083841
Transcript Infomation

pacid=37469533 locus=PGSC0003DMG400033623 ID=PGSC0003DMT400083841.v4.03 annot-version=v4.03
Sequence

ATGGCTGGAGGAGATGCAAGTTCAAGGGAATTAGATCAAACACCTACATGGGCTGTGGCT
TTGGTTTGTGCTGTTATTGTTCTTATTTCCATTTTATTGGAAAAGGTTCTTCATAAAGTT
GGACAGACATTTGAGAGGAGACGAAAAAGTGCATTGGTGGAAGCATTGGAGAAGATTAAG
GCTGAGCTTATGGTTCTTGGTTTTATATCGTTGCTTCTGACGTTCGGACAAAATTACATA
TCGCGAATATGCATACCTGAAAGGGTTGCAGACACAATGTTGCCATGCCCTGCCCAACAA
CACGCACGTTTGGGATATGGAGGAGGACATCATGCACCTGGACAAGGTCATCATCAACCA
CCTGGTACCGGAGAAGCTCATCGAAGGCTTCTATCAGACCATAGGATATTAGCAGCTGAT
AGTCCTGCAGAAACCTGCAGGCCGGGACAAGTTCCACTTATATCCACCCATGGTTTGCAT
CAGCTGCACATTTTCATATTCTTTTTAGCCGTCTTCCACGTTATTTACAGTGCCATAACA
ATGCTGCTCGGAAGATTAAAGATTCGTGAGTGGAAGGAATGGGAAAGGCAAGTTGAGCAT
GAGTATGAAGCATCCAATGATGCCTCAAGATTCAGGCTTACCAAAGAGACATCTTTTGTT
AGGGATAATACGAGTTTTGGAACCACCCCAATCATTTTCTACAGTGTGTGCTTTTTTAGG
CAATTTTTCAGGTCAGTTAGGAAAGCTGACTACTTGACCATGCGCCACGGTTTCATCACG
GTCCATTTAGCACCTGGAAGTAAGTTTAATTTTCAAAAGTACATAAAAAGATCCTTGGAA
GATGATTTCAAGGTTATTGTGGGAATCAATTCACTGCTATGGTTTTCTGCAGTTGTTTAT
CTTCTGTTGAATGTCCACGGATGGCAAGCTATGTTTTGGCTGTCCATACTGCCTTTAGTT
ATAATCTTAGCAGTTGGCACAAAACTTCAAGCAATTATAGCTCAGATGGCTCTTGAAATT
CAAGAAAGACATGCTGTAGTCCAAGGCATACCTCTTGTTCAAATTTCAGATAGAAATTTT
TGGTTTGGAAAGCCCACTCTAATTCTTCATCTTGTCCATCTCACCCTCTTTCAGAATGCT
TTCGAGATAACTTATTTCCTTTGGATAACATATGAATTTGGGCTCCATTCCTGTTTTCAC
GATAATTTTTACCTCGCCTTATTGAGAGTTGCTATCGGGTTAGGTGTTCAGATTTTGTGC
AGCTACATTACACTTCCACTGTATGCTCTTGTTACCCAGATGGGATCAACCATGAAGAGA
TCAATATTTGATGATCAAACTTCCAAGGCACTAATGAATTGGCATAAGAATGCAAAAAAG
AGGAGACCTACAAAGCCTGGACCAATAGAAACACGAAAATTAGGGAGTCCAGGGGAATCA
CCTGAAACTTCCCCGACTACAAAAGGTGGTCTCGGATCAAGAAGAAAAATGTCTCAAGTA
GAGCCGTTGTCCTCTAATCAGACAGCCAACATTGTTGCTAGCGTTGACATTCCAGAGGAA
AAGCCTCCCGCGAACCCTGACCTACTTACAGGTCTTTGA