Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083817
CDS Infomation

pacid=37471731 polypeptide=PGSC0003DMP400056096 locus=PGSC0003DMG400033614 ID=PGSC0003DMT400083817.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTGCTGACAAATCCTTCACCGGTTGGCTCAAACGAGAAGACTGTAAACGCACA
AAACATGATTCCGCTTTCTCCGACTGGAAGATTCTGGTTGGGCCTAATGATTGGGAGGAT
TATTTACTGGGGAAGGAAGGAACAGAGAGATATAGGACTCAGAACCTGCCAAACTGCACC
TCATGCTCTGGAGTTTATGAACTGGGAATAGCTGTGTCACGACGAAAGACTGAGCGAGAG
GCTAGCAGACTTGGCGCTGATTATATTGTTCCTGTATATGTTGGAAAATCGGATAATGTT
AGGACTAGGCTGCAGCAATATGGACGTGTAGGTGCTCATTTAGAGAATGACTGTTCCAAT
AGCGAGCTGCGCGTTGATAAAAATATATCTGGTCCAAAGAGAGCTGGATTATTTACAGAA
ACATTCTCAAGAGGCTTCTCTATTGTTTATAGGTGGGCACCTATGAATGACAATAAAGAT
GCTGAGAGAACTGAAGCCCAGCTGCTCGACAAATTTGATTATGCTTGGAATAAAGGAAGT
AATGGTGTACGTCGCCACAATGATGTCCTCCGCAAGCTTGATGGCATTTCAAGAGAAACT
CGTTTTCCTGCTTTCATCAGGAAGCTTCAATTGTCCCTTGGGAAACGAAAGGGCATTAGA
ATCAAGGCATGCGAGCCCCTTTTATTGGAGAATGGATCTGATGTTCATGATAGCTTCAAA
AGCACCAACTTCCTTCCACAAATTTTGAAATTTGGGCGATCACAGCCAAGGATAGTTTCA
CTGAATTTTGGTGTAAATGGTGATCCAAATATTATTTGTGGCGTGGCTTTAGGTCATGGA
TCTGTTTGTATAAGGCCTCCAATAACAGGAAATAAACGATGTGCTGAGCACAAGGGAATG
AAGGTAAACAGTGTAAAGTCCAAGTTGATTGCAGAAGGAAATGAGAGTACAAGACCGTGT
GTGAGTATAGGTGAGGAAAATGCTCCAATTTGTGGTTTTATCTTGGATAGTGGTTCTCCT
TGTGCAAGAATACCATTCCAGAGAAACAAAAGATGTATGGAGCACAAGGGACGGAGAAAT
CAAGGCTCCATTTCTCAGCCAATGACAGACAAAATTGGCCAGTGGACCCACAATCCTATA
CTGGAAAACAGGACTTCTTCTAGTAATGATTGTCAGCATATTTTATCTAGCAGAGCGGGT
ACACAAGACTCTCAAGAGTTCTCCAGTTCTCTTATCCACCAGAACTACAATGTCATATGT
GGAGTTCATTTAAATGATGGTAGTTTCTGCACCAGGCAACCTGCAGTAGGAAGAAAGCGG
TGTGTAGGACATAAGGGTATGAGGGTTAAAGAGCCCATTTCTAAGCAATTAGGAGTTGAA
ATACCAAGTTTATTTGCAGGTCCAGTTGCCAAAATTAGCAGTGGAAAAAAGCATCTGAAT
ATAAACATTCCATCAGTCAACTATTCTCCAACTTGTGGAGCAACACTGCGTAATGGTTCT
TTTTGCAGAAGGAAATCTTCGGAAGGTAATAAAAGATGCTGGCAGCACAAAGGCAGGAAG
AACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056096
PEP Infomation

pacid=37471731 transcript=PGSC0003DMT400083817 locus=PGSC0003DMG400033614 ID=PGSC0003DMT400083817.v4.03 annot-version=v4.03
Sequence

MAAADKSFTGWLKREDCKRTKHDSAFSDWKILVGPNDWEDYLLGKEGTERYRTQNLPNCT
SCSGVYELGIAVSRRKTEREASRLGADYIVPVYVGKSDNVRTRLQQYGRVGAHLENDCSN
SELRVDKNISGPKRAGLFTETFSRGFSIVYRWAPMNDNKDAERTEAQLLDKFDYAWNKGS
NGVRRHNDVLRKLDGISRETRFPAFIRKLQLSLGKRKGIRIKACEPLLLENGSDVHDSFK
STNFLPQILKFGRSQPRIVSLNFGVNGDPNIICGVALGHGSVCIRPPITGNKRCAEHKGM
KVNSVKSKLIAEGNESTRPCVSIGEENAPICGFILDSGSPCARIPFQRNKRCMEHKGRRN
QGSISQPMTDKIGQWTHNPILENRTSSSNDCQHILSSRAGTQDSQEFSSSLIHQNYNVIC
GVHLNDGSFCTRQPAVGRKRCVGHKGMRVKEPISKQLGVEIPSLFAGPVAKISSGKKHLN
INIPSVNYSPTCGATLRNGSFCRRKSSEGNKRCWQHKGRKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400083817
Transcript Infomation

pacid=37471731 locus=PGSC0003DMG400033614 ID=PGSC0003DMT400083817.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTGCTGACAAATCCTTCACCGGTTGGCTCAAACGAGAAGACTGTAAACGCACA
AAACATGATTCCGCTTTCTCCGACTGGAAGATTCTGGTTGGGCCTAATGATTGGGAGGAT
TATTTACTGGGGAAGGAAGGAACAGAGAGATATAGGACTCAGAACCTGCCAAACTGCACC
TCATGCTCTGGAGTTTATGAACTGGGAATAGCTGTGTCACGACGAAAGACTGAGCGAGAG
GCTAGCAGACTTGGCGCTGATTATATTGTTCCTGTATATGTTGGAAAATCGGATAATGTT
AGGACTAGGCTGCAGCAATATGGACGTGTAGGTGCTCATTTAGAGAATGACTGTTCCAAT
AGCGAGCTGCGCGTTGATAAAAATATATCTGGTCCAAAGAGAGCTGGATTATTTACAGAA
ACATTCTCAAGAGGCTTCTCTATTGTTTATAGGTGGGCACCTATGAATGACAATAAAGAT
GCTGAGAGAACTGAAGCCCAGCTGCTCGACAAATTTGATTATGCTTGGAATAAAGGAAGT
AATGGTGTACGTCGCCACAATGATGTCCTCCGCAAGCTTGATGGCATTTCAAGAGAAACT
CGTTTTCCTGCTTTCATCAGGAAGCTTCAATTGTCCCTTGGGAAACGAAAGGGCATTAGA
ATCAAGGCATGCGAGCCCCTTTTATTGGAGAATGGATCTGATGTTCATGATAGCTTCAAA
AGCACCAACTTCCTTCCACAAATTTTGAAATTTGGGCGATCACAGCCAAGGATAGTTTCA
CTGAATTTTGGTGTAAATGGTGATCCAAATATTATTTGTGGCGTGGCTTTAGGTCATGGA
TCTGTTTGTATAAGGCCTCCAATAACAGGAAATAAACGATGTGCTGAGCACAAGGGAATG
AAGGTAAACAGTGTAAAGTCCAAGTTGATTGCAGAAGGAAATGAGAGTACAAGACCGTGT
GTGAGTATAGGTGAGGAAAATGCTCCAATTTGTGGTTTTATCTTGGATAGTGGTTCTCCT
TGTGCAAGAATACCATTCCAGAGAAACAAAAGATGTATGGAGCACAAGGGACGGAGAAAT
CAAGGCTCCATTTCTCAGCCAATGACAGACAAAATTGGCCAGTGGACCCACAATCCTATA
CTGGAAAACAGGACTTCTTCTAGTAATGATTGTCAGCATATTTTATCTAGCAGAGCGGGT
ACACAAGACTCTCAAGAGTTCTCCAGTTCTCTTATCCACCAGAACTACAATGTCATATGT
GGAGTTCATTTAAATGATGGTAGTTTCTGCACCAGGCAACCTGCAGTAGGAAGAAAGCGG
TGTGTAGGACATAAGGGTATGAGGGTTAAAGAGCCCATTTCTAAGCAATTAGGAGTTGAA
ATACCAAGTTTATTTGCAGGTCCAGTTGCCAAAATTAGCAGTGGAAAAAAGCATCTGAAT
ATAAACATTCCATCAGTCAACTATTCTCCAACTTGTGGAGCAACACTGCGTAATGGTTCT
TTTTGCAGAAGGAAATCTTCGGAAGGTAATAAAAGATGCTGGCAGCACAAAGGCAGGAAG
AACTGA