Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083774
CDS Infomation

pacid=37436780 polypeptide=PGSC0003DMP400056068 locus=PGSC0003DMG400033576 ID=PGSC0003DMT400083774.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGCAAATCGCAGAGCTAACATGTACGGACGGGAGACAATGAACGCTGCACTT
CACCAAGATAGACACCAGCAAACTCAGATCGACGACGACGATGATGACGACGTCGTCGCT
GCTGGCGGCGGCGGCGGTGGTGGTGGAAGTGGAGGAGGAATAGAGTCTATGGACAACCCT
ACTCCTCACATTCGCTACGACCAACATCATCACTCTCATTCTCACGCGCTTCACAACGGC
GGCGCCGGCGGTTCTATGGAGATGAATGGTGTGGAAGGTGTTTCTCATAACGCCTTGTAT
GGTCCCTCTTCCGAAATTGTTCCTACTGCTGGTAGTGGAGCTTCCGATCAGCTTACGCTG
TCGTTTCAAGGCGAAGTTTATGTATTTGATGCCGTTTCACCTGAAAAGGTTCAGGCGGTG
CTGTTACTGTTGGGGGGATACGAAGTCCCTCCTGGCATCCCTGCTGTCAATGTGGCTCCC
CAAAGTCAGAGGGCTTCAGGTGACTTTCCTGGAAGATTGAATCAACCACAAAGAGCTGCT
TCTTTAAATCGTTTTAGGGAAAAGAGGAAAGAACGGTGTTTTGATAAAAAGATCCGCTAT
ACTGTGCGGAAGGAAGTTGCGATGAGGATGCAGCGTAAGAAAGGTCAGTTTACATCTGCC
AAATCAATACCTGACGAAGTAGGTTCTTCTGCAGAGTGGAATGAAGGCTCTGGTCAAGAA
GAGCAAGAAACATCATGTAGACATTGCAATATTAGTTCGAAATCCACTCCTATGATGCGT
CGGGGACCAGCTGGCCCAAGGTCTCTTTGTAATGCATGTGGACTCAAGTGGGCCAATAAG
GTTAGTATTGAGTTGAAAATTCACTCATTTCCATGGTTTTTATTTGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400056068
PEP Infomation

pacid=37436780 transcript=PGSC0003DMT400083774 locus=PGSC0003DMG400033576 ID=PGSC0003DMT400083774.v4.03 annot-version=v4.03
Sequence

MAEANRRANMYGRETMNAALHQDRHQQTQIDDDDDDDVVAAGGGGGGGGSGGGIESMDNP
TPHIRYDQHHHSHSHALHNGGAGGSMEMNGVEGVSHNALYGPSSEIVPTAGSGASDQLTL
SFQGEVYVFDAVSPEKVQAVLLLLGGYEVPPGIPAVNVAPQSQRASGDFPGRLNQPQRAA
SLNRFREKRKERCFDKKIRYTVRKEVAMRMQRKKGQFTSAKSIPDEVGSSAEWNEGSGQE
EQETSCRHCNISSKSTPMMRRGPAGPRSLCNACGLKWANKVSIELKIHSFPWFLFE*

Transcript Sequence

Transcript ID

PGSC0003DMT400083774
Transcript Infomation

pacid=37436780 locus=PGSC0003DMG400033576 ID=PGSC0003DMT400083774.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGCAAATCGCAGAGCTAACATGTACGGACGGGAGACAATGAACGCTGCACTT
CACCAAGATAGACACCAGCAAACTCAGATCGACGACGACGATGATGACGACGTCGTCGCT
GCTGGCGGCGGCGGCGGTGGTGGTGGAAGTGGAGGAGGAATAGAGTCTATGGACAACCCT
ACTCCTCACATTCGCTACGACCAACATCATCACTCTCATTCTCACGCGCTTCACAACGGC
GGCGCCGGCGGTTCTATGGAGATGAATGGTGTGGAAGGTGTTTCTCATAACGCCTTGTAT
GGTCCCTCTTCCGAAATTGTTCCTACTGCTGGTAGTGGAGCTTCCGATCAGCTTACGCTG
TCGTTTCAAGGCGAAGTTTATGTATTTGATGCCGTTTCACCTGAAAAGGTTCAGGCGGTG
CTGTTACTGTTGGGGGGATACGAAGTCCCTCCTGGCATCCCTGCTGTCAATGTGGCTCCC
CAAAGTCAGAGGGCTTCAGGTGACTTTCCTGGAAGATTGAATCAACCACAAAGAGCTGCT
TCTTTAAATCGTTTTAGGGAAAAGAGGAAAGAACGGTGTTTTGATAAAAAGATCCGCTAT
ACTGTGCGGAAGGAAGTTGCGATGAGGATGCAGCGTAAGAAAGGTCAGTTTACATCTGCC
AAATCAATACCTGACGAAGTAGGTTCTTCTGCAGAGTGGAATGAAGGCTCTGGTCAAGAA
GAGCAAGAAACATCATGTAGACATTGCAATATTAGTTCGAAATCCACTCCTATGATGCGT
CGGGGACCAGCTGGCCCAAGGTCTCTTTGTAATGCATGTGGACTCAAGTGGGCCAATAAG
GTTAGTATTGAGTTGAAAATTCACTCATTTCCATGGTTTTTATTTGAATAG