Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083772
CDS Infomation

pacid=37439293 polypeptide=PGSC0003DMP400056066 locus=PGSC0003DMG400033575 ID=PGSC0003DMT400083772.v4.03 annot-version=v4.03
Sequence

ATGCACGAAAACTCTGTTGCCGCCTCCGTCGCCAATTCCTCCACCGCCGCCGGTGTGCCC
GCCGTGGTCAACAACTCACACCTTCCACCACAACCATTACCGAGACGTGTTGTGTTCCGA
CTTCTCTGCCATGCTTCACGCGTCGGTGGGGTTATCGGAAAATCAGGGTCCATTATTAGA
CAACTTCAACAAGACACCTCCGCTAAGATTCACGTTGATGTGTCCGCACCAAACGACCAC
AACCGACTCATTGTTGTAGTAGCCCCTGCTTCAGTAAACAAGAGGATAAGGCTATTGGGC
CCCATTGGGGATAACCAGCGGAATGAAGAAATTGATGAAATAGAGGTTTCGGCTGCACAA
GAAGCACTTGTTAGGGTTTTTGAGAGAGTGATAGAAGTAACAGCGGAAAATAATGGACTA
GTTTTGGGTGTGGAGAATGTTGTGTCGTGTAGGTTATTAGTGAAGGGGAATCAAGTGGGG
GCTTTGATGGGCAAAGGTGGAAAAGTAATAGACACAATTAGAAGAGAAAATGGATGTAGG
ATTAAGGTATTAACTTCAGGAAAGATGCCAAGTTGTGCTTCGCCCAATGATGAAATTGTC
GAGATAGAAGGGGATATTCTGGCTGTCAAGAAAGCACTTGTTGCTGTCAGTCGCCGCCTT
CAAGATTGTTTCTCTGTTGAAAGGACTAGAACGGTTGATAATGCACCAATTGAGTTAGAT
TCAGAGCAGACTTTGCCCCCTGAGCCAATTGATCTACCTGCACAAAGGAGTTCAATGTCA
CAGCCAATAACTACAAGCTCTTTCTCAGGTGCCTCTGGATGTCATTCTGTGCCACTAGAG
GCTGACAAGTTTTCCAGCATTGATTCAAAAATGCCATTACAAGAGGTTGCTTTCAGGATT
CTCTGCACAAATGATAAGGTCGGGGCTATAATTGGCAAGGCTGGAACAATTGTTAGGGCT
CTTCAGAATGACAGCGGAGCAAGCATTGCTGTTGGGCCAAATGTTGCTGAGTGCAACGAG
CGAATGATAACTATTACTGCATTAGAGAATCTAGAATTACGGAAATCTCCAGCACAAACC
GCTGTTGTTCTTGTTTTTGATCGGATTCTGGATGCTGGTTCTGGGATGAATTTGGGAACA
AGATCACTAATTACATTCCGACTTGTGGTGGCAAACAGCCAAGTTGGTTGTTTATTGGGG
AAGGGAGGCGCAATAATTTCAGATATCAGGAAGGAGACAGGTACCAGCATACGGATATTT
AGAGGTGACCAAGTTCCTAAGTGTGTCTCGGACAATGATGAAGTTGTACAGATTGCAGGT
GAGTTCGTAAATGTACAAGATGCTTTACGAAATGTCACTGGTCGGTTGCGTGATAACCTC
TTGGCAGCAAAGGTGTCAAATGGTGGCATCAGTAGAAACAGCTCCCCTTTGACATCTGAA
AGTAGTCCCTCTGGCCAAATGAAGGAACCTCCTTTTGGATTTCATCGGTCTAGTGGTGTC
TCACATGGTAACAATCAACATCCTGAGTTAACACGGTCTATTAATAACCTTGTACTTTCC
AACAAGATAGATCATCCCCCATCACCGGGGCTGTGGTCATCACAGACACGACCCGCAGTA
AACCAGAGAGGTGCTTTTGATGTCAGCAAAGGATCTAATTCAGTTAAAGGTGTCATAGAA
CTTGGAAGTGGAAGCAGATCTGCCATAGTGACCAATACTACTGTGAAGATCATGGTTCCT
GAAAACATCATGAGCTGTGTGTATGGGGAGGACGGGAGCAACTTGACTCGTTTAAGACAG
ATTTCAGGAGCAAGGGTCATGGTACACGAGCCCCGTCCTGGAACAACTGACAGGATTATC
GTGATCTCTGGGACCCCAGATGAAACCCAGGCAGCTCAGAGTCTCCTTCAGGCATTCATA
CTAACTGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400056066
PEP Infomation

pacid=37439293 transcript=PGSC0003DMT400083772 locus=PGSC0003DMG400033575 ID=PGSC0003DMT400083772.v4.03 annot-version=v4.03
Sequence

MHENSVAASVANSSTAAGVPAVVNNSHLPPQPLPRRVVFRLLCHASRVGGVIGKSGSIIR
QLQQDTSAKIHVDVSAPNDHNRLIVVVAPASVNKRIRLLGPIGDNQRNEEIDEIEVSAAQ
EALVRVFERVIEVTAENNGLVLGVENVVSCRLLVKGNQVGALMGKGGKVIDTIRRENGCR
IKVLTSGKMPSCASPNDEIVEIEGDILAVKKALVAVSRRLQDCFSVERTRTVDNAPIELD
SEQTLPPEPIDLPAQRSSMSQPITTSSFSGASGCHSVPLEADKFSSIDSKMPLQEVAFRI
LCTNDKVGAIIGKAGTIVRALQNDSGASIAVGPNVAECNERMITITALENLELRKSPAQT
AVVLVFDRILDAGSGMNLGTRSLITFRLVVANSQVGCLLGKGGAIISDIRKETGTSIRIF
RGDQVPKCVSDNDEVVQIAGEFVNVQDALRNVTGRLRDNLLAAKVSNGGISRNSSPLTSE
SSPSGQMKEPPFGFHRSSGVSHGNNQHPELTRSINNLVLSNKIDHPPSPGLWSSQTRPAV
NQRGAFDVSKGSNSVKGVIELGSGSRSAIVTNTTVKIMVPENIMSCVYGEDGSNLTRLRQ
ISGARVMVHEPRPGTTDRIIVISGTPDETQAAQSLLQAFILTE*

Transcript Sequence

Transcript ID

PGSC0003DMT400083772
Transcript Infomation

pacid=37439293 locus=PGSC0003DMG400033575 ID=PGSC0003DMT400083772.v4.03 annot-version=v4.03
Sequence

ATGCACGAAAACTCTGTTGCCGCCTCCGTCGCCAATTCCTCCACCGCCGCCGGTGTGCCC
GCCGTGGTCAACAACTCACACCTTCCACCACAACCATTACCGAGACGTGTTGTGTTCCGA
CTTCTCTGCCATGCTTCACGCGTCGGTGGGGTTATCGGAAAATCAGGGTCCATTATTAGA
CAACTTCAACAAGACACCTCCGCTAAGATTCACGTTGATGTGTCCGCACCAAACGACCAC
AACCGACTCATTGTTGTAGTAGCCCCTGCTTCAGTAAACAAGAGGATAAGGCTATTGGGC
CCCATTGGGGATAACCAGCGGAATGAAGAAATTGATGAAATAGAGGTTTCGGCTGCACAA
GAAGCACTTGTTAGGGTTTTTGAGAGAGTGATAGAAGTAACAGCGGAAAATAATGGACTA
GTTTTGGGTGTGGAGAATGTTGTGTCGTGTAGGTTATTAGTGAAGGGGAATCAAGTGGGG
GCTTTGATGGGCAAAGGTGGAAAAGTAATAGACACAATTAGAAGAGAAAATGGATGTAGG
ATTAAGGTATTAACTTCAGGAAAGATGCCAAGTTGTGCTTCGCCCAATGATGAAATTGTC
GAGATAGAAGGGGATATTCTGGCTGTCAAGAAAGCACTTGTTGCTGTCAGTCGCCGCCTT
CAAGATTGTTTCTCTGTTGAAAGGACTAGAACGGTTGATAATGCACCAATTGAGTTAGAT
TCAGAGCAGACTTTGCCCCCTGAGCCAATTGATCTACCTGCACAAAGGAGTTCAATGTCA
CAGCCAATAACTACAAGCTCTTTCTCAGGTGCCTCTGGATGTCATTCTGTGCCACTAGAG
GCTGACAAGTTTTCCAGCATTGATTCAAAAATGCCATTACAAGAGGTTGCTTTCAGGATT
CTCTGCACAAATGATAAGGTCGGGGCTATAATTGGCAAGGCTGGAACAATTGTTAGGGCT
CTTCAGAATGACAGCGGAGCAAGCATTGCTGTTGGGCCAAATGTTGCTGAGTGCAACGAG
CGAATGATAACTATTACTGCATTAGAGAATCTAGAATTACGGAAATCTCCAGCACAAACC
GCTGTTGTTCTTGTTTTTGATCGGATTCTGGATGCTGGTTCTGGGATGAATTTGGGAACA
AGATCACTAATTACATTCCGACTTGTGGTGGCAAACAGCCAAGTTGGTTGTTTATTGGGG
AAGGGAGGCGCAATAATTTCAGATATCAGGAAGGAGACAGGTACCAGCATACGGATATTT
AGAGGTGACCAAGTTCCTAAGTGTGTCTCGGACAATGATGAAGTTGTACAGATTGCAGGT
GAGTTCGTAAATGTACAAGATGCTTTACGAAATGTCACTGGTCGGTTGCGTGATAACCTC
TTGGCAGCAAAGGTGTCAAATGGTGGCATCAGTAGAAACAGCTCCCCTTTGACATCTGAA
AGTAGTCCCTCTGGCCAAATGAAGGAACCTCCTTTTGGATTTCATCGGTCTAGTGGTGTC
TCACATGGTAACAATCAACATCCTGAGTTAACACGGTCTATTAATAACCTTGTACTTTCC
AACAAGATAGATCATCCCCCATCACCGGGGCTGTGGTCATCACAGACACGACCCGCAGTA
AACCAGAGAGGTGCTTTTGATGTCAGCAAAGGATCTAATTCAGTTAAAGGTGTCATAGAA
CTTGGAAGTGGAAGCAGATCTGCCATAGTGACCAATACTACTGTGAAGATCATGGTTCCT
GAAAACATCATGAGCTGTGTGTATGGGGAGGACGGGAGCAACTTGACTCGTTTAAGACAG
ATTTCAGGAGCAAGGGTCATGGTACACGAGCCCCGTCCTGGAACAACTGACAGGATTATC
GTGATCTCTGGGACCCCAGATGAAACCCAGGCAGCTCAGAGTCTCCTTCAGGCATTCATA
CTAACTGAATAA