Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083738
CDS Infomation

pacid=37437950 polypeptide=PGSC0003DMP400056039 locus=PGSC0003DMG400033569 ID=PGSC0003DMT400083738.v4.03 annot-version=v4.03
Sequence

ATGAACAGAATCATATATGAGTCAAGGGATGCAGAATTGAGCAAGATATCTTTAAATGAG
TTACCAGGTGGACCTGAGGCATTTGAGCTAGCAGCAAAGTTCTGTTATGGTATTGCTATT
GATCTAAGTGCAACCAATATTTCTGGCTTAAGATGTGCAGCAGAGTATCTTGAAATGACT
GAGGATTTGGAAGAAGGCAATCTTATATTCAAGACTGAAGCTTTTCTCAGCTATGTGGTT
TTATCTTCATGGAGAGATTCCATACTGGTGCTAAAGAGCTGTGAAAAGTTATCACCATGG
GCTGAAAACCTACAAATTGTTAGAAGATGTAGTGAGTCCATTGCATGGAAAGCTTGTGCC
AATCCAAAAGGTATAAAATGGCAATATACTGGTAAGCCTGCAAGCGTTTCTAGTCCGAGT
AGAAACCACCAAGTACCTCCTGATTGGTGGTTTGAAGATGTTACGATTCTCAGGATTGAT
CACTTTGTGAGAGTGATTACTGCAATCAAGGTAAAGGGAATGAGACATGAACTGATAGGT
GCTTCCATTATGCAGTATGCAACTAAATGGCTGCCAGGTTTAATCAAAGAAGGATCCGGA
TTGGCGGAAGATGGCAGCAATAGCAGTAATAGTAATGGAAGCAGTAGTTGGAGAGGGGGT
CTCCATATGATAATAGCAGGATCAGGAGAAGAAATACCAACTGTCCAGGCAAAAGATCAA
AGGATGATTGTTGAAAGCCTAATAAGCATACTCCCACAACAGAAGGACAGTGTTTCGTGT
AGCTTCCTTCTTCGACTATTGAGGATGGCAAACATGCTTAAAGTGGCTCCAGCTTTGATA
ACAGAACTGGAGAAACGCGTAGGCATGCAATTTGAGCAGGCTACATTGGCTGATCTCCTC
ATACCATCTTACAATAAAAGTGAAACCATGTATGACATTGATCTCGTGCAGAGGCTTTTG
GAACATTTCATAATTCAAGAGCAGACAGAAAGTTCAAGTCCTAGTAGATATTCATTCCCC
GATAAACATATGCACGATGGAAGTCAAAGGGGTACAAATCTAAATGCCAAGATGAGGGTG
GCAAGGCTCGTTGACAGTTACTTAACAGAAGTATCTAGAGATAGAAATCTTTCCTTGACA
AAGTTTCAGGTCTTGGCTGAGGCTTTGCCAGATTCAGCAAGAACATGTGACGATGGACTT
TATCGAGCAATTGATTCCTATCTCAAGGCCCATCCAACACTCTCAGAACATGAAAGAAAG
AGGCTTTGCAGGGTGATGGATTGCCAGAAACTCTCTGTCGATGCTTGCATGCACGCTGCT
CAGAACGAAAGGCTCCCACTACGAGTCGTGGTGCAAGTTCTCTTCTCTGAGCAGGTGAAG
ATAAGCAATGCAATAGCCAATATCTCTCTCAAAGATGCAGGGGAATCTCATTATCAACCC
CTGGTATCACACCATAAGTCATTGCTTGAAGCAACGCCACAATCATTTCAAGAGGGATGG
ACAGCAGCCAAGAAGGACATCAACACTCTTAAGTTTGAACTAGAGACTGTGAAGACTAAA
TACGTAGAACTCCAAAATGACATGGATAACTTACAGAGACAGTTCGATAAGATTGCAAAA
CCAAAACAAGCCTCAGCATGGACTGCAGGTTGGAAAAAGTTGAGCAAGCTCACAAAAACG
ACAAATGTAGAAACACATGACATCAGTAGTCATATCCCAAATGCTGAACAGACCACAAAG
CCTAGAAGGTGGAGAAATTCCATTTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400056039
PEP Infomation

pacid=37437950 transcript=PGSC0003DMT400083738 locus=PGSC0003DMG400033569 ID=PGSC0003DMT400083738.v4.03 annot-version=v4.03
Sequence

MNRIIYESRDAELSKISLNELPGGPEAFELAAKFCYGIAIDLSATNISGLRCAAEYLEMT
EDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACA
NPKGIKWQYTGKPASVSSPSRNHQVPPDWWFEDVTILRIDHFVRVITAIKVKGMRHELIG
ASIMQYATKWLPGLIKEGSGLAEDGSNSSNSNGSSSWRGGLHMIIAGSGEEIPTVQAKDQ
RMIVESLISILPQQKDSVSCSFLLRLLRMANMLKVAPALITELEKRVGMQFEQATLADLL
IPSYNKSETMYDIDLVQRLLEHFIIQEQTESSSPSRYSFPDKHMHDGSQRGTNLNAKMRV
ARLVDSYLTEVSRDRNLSLTKFQVLAEALPDSARTCDDGLYRAIDSYLKAHPTLSEHERK
RLCRVMDCQKLSVDACMHAAQNERLPLRVVVQVLFSEQVKISNAIANISLKDAGESHYQP
LVSHHKSLLEATPQSFQEGWTAAKKDINTLKFELETVKTKYVELQNDMDNLQRQFDKIAK
PKQASAWTAGWKKLSKLTKTTNVETHDISSHIPNAEQTTKPRRWRNSIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400083738
Transcript Infomation

pacid=37437950 locus=PGSC0003DMG400033569 ID=PGSC0003DMT400083738.v4.03 annot-version=v4.03
Sequence

ATGAACAGAATCATATATGAGTCAAGGGATGCAGAATTGAGCAAGATATCTTTAAATGAG
TTACCAGGTGGACCTGAGGCATTTGAGCTAGCAGCAAAGTTCTGTTATGGTATTGCTATT
GATCTAAGTGCAACCAATATTTCTGGCTTAAGATGTGCAGCAGAGTATCTTGAAATGACT
GAGGATTTGGAAGAAGGCAATCTTATATTCAAGACTGAAGCTTTTCTCAGCTATGTGGTT
TTATCTTCATGGAGAGATTCCATACTGGTGCTAAAGAGCTGTGAAAAGTTATCACCATGG
GCTGAAAACCTACAAATTGTTAGAAGATGTAGTGAGTCCATTGCATGGAAAGCTTGTGCC
AATCCAAAAGGTATAAAATGGCAATATACTGGTAAGCCTGCAAGCGTTTCTAGTCCGAGT
AGAAACCACCAAGTACCTCCTGATTGGTGGTTTGAAGATGTTACGATTCTCAGGATTGAT
CACTTTGTGAGAGTGATTACTGCAATCAAGGTAAAGGGAATGAGACATGAACTGATAGGT
GCTTCCATTATGCAGTATGCAACTAAATGGCTGCCAGGTTTAATCAAAGAAGGATCCGGA
TTGGCGGAAGATGGCAGCAATAGCAGTAATAGTAATGGAAGCAGTAGTTGGAGAGGGGGT
CTCCATATGATAATAGCAGGATCAGGAGAAGAAATACCAACTGTCCAGGCAAAAGATCAA
AGGATGATTGTTGAAAGCCTAATAAGCATACTCCCACAACAGAAGGACAGTGTTTCGTGT
AGCTTCCTTCTTCGACTATTGAGGATGGCAAACATGCTTAAAGTGGCTCCAGCTTTGATA
ACAGAACTGGAGAAACGCGTAGGCATGCAATTTGAGCAGGCTACATTGGCTGATCTCCTC
ATACCATCTTACAATAAAAGTGAAACCATGTATGACATTGATCTCGTGCAGAGGCTTTTG
GAACATTTCATAATTCAAGAGCAGACAGAAAGTTCAAGTCCTAGTAGATATTCATTCCCC
GATAAACATATGCACGATGGAAGTCAAAGGGGTACAAATCTAAATGCCAAGATGAGGGTG
GCAAGGCTCGTTGACAGTTACTTAACAGAAGTATCTAGAGATAGAAATCTTTCCTTGACA
AAGTTTCAGGTCTTGGCTGAGGCTTTGCCAGATTCAGCAAGAACATGTGACGATGGACTT
TATCGAGCAATTGATTCCTATCTCAAGGCCCATCCAACACTCTCAGAACATGAAAGAAAG
AGGCTTTGCAGGGTGATGGATTGCCAGAAACTCTCTGTCGATGCTTGCATGCACGCTGCT
CAGAACGAAAGGCTCCCACTACGAGTCGTGGTGCAAGTTCTCTTCTCTGAGCAGGTGAAG
ATAAGCAATGCAATAGCCAATATCTCTCTCAAAGATGCAGGGGAATCTCATTATCAACCC
CTGGTATCACACCATAAGTCATTGCTTGAAGCAACGCCACAATCATTTCAAGAGGGATGG
ACAGCAGCCAAGAAGGACATCAACACTCTTAAGTTTGAACTAGAGACTGTGAAGACTAAA
TACGTAGAACTCCAAAATGACATGGATAACTTACAGAGACAGTTCGATAAGATTGCAAAA
CCAAAACAAGCCTCAGCATGGACTGCAGGTTGGAAAAAGTTGAGCAAGCTCACAAAAACG
ACAAATGTAGAAACACATGACATCAGTAGTCATATCCCAAATGCTGAACAGACCACAAAG
CCTAGAAGGTGGAGAAATTCCATTTCCTGA