Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083511
CDS Infomation

pacid=37430125 polypeptide=PGSC0003DMP400056010 locus=PGSC0003DMG400033362 ID=PGSC0003DMT400083511.v4.03 annot-version=v4.03
Sequence

ATGGGGACGAAGCATCATTCCTCCTCCGATTCAATCAGCGATCCCAAAAAGCGCCGTCGC
GTGGGATTCTCTAAGACCGATGCTGGAATTGAAGCTAACGACTGCATTACTATATACATA
GTTTCTAGCGCAGAGGATGTTGACTCCCCAAGCAGTTTCTGTCTTGAACCAATTGACTTG
AATCAATTTTTTGAAGACGATGGCAGAATATTTGGGTATCAGGGTCTGAAGATCACTATA
TGGGTTAGCTTGATATCCTTTCATGCCTATGCTGATATTTCTTTTGAAAGCTCATCAGAT
GGTGGCAGAGGGATCACAAACGTAAAGTATGCCCTTCAGAATATTTTTGCTGAGAGTCTT
GTTGATGAAAAAGATGCCTTCCTGCAAACATTTTCAACTGAAAGTCATTATGTTCGGTCT
GTTGTCTCAAATGCTGAAACACTGCAGCATAAAGTTTCAAATGGCTGTAGCACTGAATCT
AATTGTCTTTTGAAATCAGAGCCTTCAGATGTAGAGGTATTCCGGATCGCTGGCACGCCT
GTAGGACACCTTTATAGTAGATTGGTGCCACTTGTACTACTCTTAGTGGATGGTAGCAAT
CCTATTGACGTCCTTGATCCTAGATGGGAAATTTATCTCCTAGTCCAGGAAAGGAAAGAT
ACCCAGGAGGATAGCCTTTCAAGGTTGCTTGGTTTTGCAGCTGTTTATCGTTTCCATCGT
TATCCTGGAAGTACACGCATGCGACTTGGGCAGATACTGGTTATGCCTCCTTACCAACGT
AAAGGTTATGGTCGTTTTCTTCTTGAGGTGCTGAACGGGGTTGCAGTATCTGAAAATGTG
TATGACCTGACTATTGAAGAGCCTGAGGATTCTCTTCAATATGTTCGATTGTGCATTGAT
GTTGAGCGTTTGCTTGTATTTGACCCAATCCAGCAATCCCTAGAATCAGTTATATCACAT
TTAAAGCAGGAAAATTCTTTGAAAAAAAGCTACATGTGCAAGTATGCTCCACCACTGAGT
GCTGTTGAAGATGTGAGGAAAACTTTGAAAATCAACAAGAAGCAGTTTGAGCAATGTTGG
GAGATTCTTATCTATCTTGGGTTGGCCCCAATTAACAAATATATGGAGATATACCAGGCA
ATTGTTTCACACCGAGTAAAGGCTGAAGTTGTAGGGATAGATTCAGAGGGTGCGGGGAAG
CAGGTGATTGATGTACCAACTGAATATGATCAGCAGATGTCATTTGTGATGTTCAAATCG
CAGAATGGTGAATCTAGTAGCATAGAGACGGCTGACAATCAAAGTATTGTGGAGGAGCAG
CTGCAGAAACTGGTGGATAAACGAATGAATCAGATCAAGTTGATTGCTGAGAAGGTTTCT
GCTGTTCATCGGCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400056010
PEP Infomation

pacid=37430125 transcript=PGSC0003DMT400083511 locus=PGSC0003DMG400033362 ID=PGSC0003DMT400083511.v4.03 annot-version=v4.03
Sequence

MGTKHHSSSDSISDPKKRRRVGFSKTDAGIEANDCITIYIVSSAEDVDSPSSFCLEPIDL
NQFFEDDGRIFGYQGLKITIWVSLISFHAYADISFESSSDGGRGITNVKYALQNIFAESL
VDEKDAFLQTFSTESHYVRSVVSNAETLQHKVSNGCSTESNCLLKSEPSDVEVFRIAGTP
VGHLYSRLVPLVLLLVDGSNPIDVLDPRWEIYLLVQERKDTQEDSLSRLLGFAAVYRFHR
YPGSTRMRLGQILVMPPYQRKGYGRFLLEVLNGVAVSENVYDLTIEEPEDSLQYVRLCID
VERLLVFDPIQQSLESVISHLKQENSLKKSYMCKYAPPLSAVEDVRKTLKINKKQFEQCW
EILIYLGLAPINKYMEIYQAIVSHRVKAEVVGIDSEGAGKQVIDVPTEYDQQMSFVMFKS
QNGESSSIETADNQSIVEEQLQKLVDKRMNQIKLIAEKVSAVHRQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400083511
Transcript Infomation

pacid=37430125 locus=PGSC0003DMG400033362 ID=PGSC0003DMT400083511.v4.03 annot-version=v4.03
Sequence

ATGGGGACGAAGCATCATTCCTCCTCCGATTCAATCAGCGATCCCAAAAAGCGCCGTCGC
GTGGGATTCTCTAAGACCGATGCTGGAATTGAAGCTAACGACTGCATTACTATATACATA
GTTTCTAGCGCAGAGGATGTTGACTCCCCAAGCAGTTTCTGTCTTGAACCAATTGACTTG
AATCAATTTTTTGAAGACGATGGCAGAATATTTGGGTATCAGGGTCTGAAGATCACTATA
TGGGTTAGCTTGATATCCTTTCATGCCTATGCTGATATTTCTTTTGAAAGCTCATCAGAT
GGTGGCAGAGGGATCACAAACGTAAAGTATGCCCTTCAGAATATTTTTGCTGAGAGTCTT
GTTGATGAAAAAGATGCCTTCCTGCAAACATTTTCAACTGAAAGTCATTATGTTCGGTCT
GTTGTCTCAAATGCTGAAACACTGCAGCATAAAGTTTCAAATGGCTGTAGCACTGAATCT
AATTGTCTTTTGAAATCAGAGCCTTCAGATGTAGAGGTATTCCGGATCGCTGGCACGCCT
GTAGGACACCTTTATAGTAGATTGGTGCCACTTGTACTACTCTTAGTGGATGGTAGCAAT
CCTATTGACGTCCTTGATCCTAGATGGGAAATTTATCTCCTAGTCCAGGAAAGGAAAGAT
ACCCAGGAGGATAGCCTTTCAAGGTTGCTTGGTTTTGCAGCTGTTTATCGTTTCCATCGT
TATCCTGGAAGTACACGCATGCGACTTGGGCAGATACTGGTTATGCCTCCTTACCAACGT
AAAGGTTATGGTCGTTTTCTTCTTGAGGTGCTGAACGGGGTTGCAGTATCTGAAAATGTG
TATGACCTGACTATTGAAGAGCCTGAGGATTCTCTTCAATATGTTCGATTGTGCATTGAT
GTTGAGCGTTTGCTTGTATTTGACCCAATCCAGCAATCCCTAGAATCAGTTATATCACAT
TTAAAGCAGGAAAATTCTTTGAAAAAAAGCTACATGTGCAAGTATGCTCCACCACTGAGT
GCTGTTGAAGATGTGAGGAAAACTTTGAAAATCAACAAGAAGCAGTTTGAGCAATGTTGG
GAGATTCTTATCTATCTTGGGTTGGCCCCAATTAACAAATATATGGAGATATACCAGGCA
ATTGTTTCACACCGAGTAAAGGCTGAAGTTGTAGGGATAGATTCAGAGGGTGCGGGGAAG
CAGGTGATTGATGTACCAACTGAATATGATCAGCAGATGTCATTTGTGATGTTCAAATCG
CAGAATGGTGAATCTAGTAGCATAGAGACGGCTGACAATCAAAGTATTGTGGAGGAGCAG
CTGCAGAAACTGGTGGATAAACGAATGAATCAGATCAAGTTGATTGCTGAGAAGGTTTCT
GCTGTTCATCGGCAATGA