Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083248
CDS Infomation

pacid=37451003 polypeptide=PGSC0003DMP400055925 locus=PGSC0003DMG400033140 ID=PGSC0003DMT400083248.v4.03 annot-version=v4.03
Sequence

ATGAATCGAGGATTCAGAGATTCGACGCCATTTTCAAATCCTGCAAGCTTATCGACTTCA
TATAGCAGTGGCGTTTGTATGATGAGTAGCACATGGAGGGATGAACAACACCCTTCCTTT
CTCAATTTCATCTCTTGCTTTCTCAAGGAAAATTCTTTCCGTTTAAATATTGTGCCAATT
GCACCGGATTTTATCTTTAACTGCGGTGGTTTGTCGGTAGCTTTCATGTTTCTGACCAAT
TGGGATGGTGTCGATACAGAATCTTTCTATAGAAAAGTTCAGAAATTGAAGGAGCAGTTT
GCAAACTTCTATGTTGTTATCACCCTTCCTACAAAGGAACAGAATGATTCTTTGATACAC
TCCTATATCAAGTATGGAGTGCAACTTGGAAGGCCAACATTTGTTCCTGTTCGAGATCTG
GAGATGGGCTTCGAAAAAATTGTGAAGATAGCACATGCTCGTGGGGCATGCAAACGCCAG
GATGCATTGGCAAAAATAAAAGCTGAGAAGGAAAAATCAGTACAGGCCATGGAGATTTAC
CTACAAGTGGTTACATCTATACCTGGGGTTGACAGCCATGGCGCAAATGTGCTTAATCAA
ACTATTGGTTCAATTGAAGCAATAGCTAAGTCGTCAAAGGAGTACCTTCAGGAAACTACT
GATCTTTCACCTACAACAGCTGAGACAATCACAAGGTTTTTCCGGGATCCAAAGTTTTAT
CTTGCTCCTAAAATTGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055925
PEP Infomation

pacid=37451003 transcript=PGSC0003DMT400083248 locus=PGSC0003DMG400033140 ID=PGSC0003DMT400083248.v4.03 annot-version=v4.03
Sequence

MNRGFRDSTPFSNPASLSTSYSSGVCMMSSTWRDEQHPSFLNFISCFLKENSFRLNIVPI
APDFIFNCGGLSVAFMFLTNWDGVDTESFYRKVQKLKEQFANFYVVITLPTKEQNDSLIH
SYIKYGVQLGRPTFVPVRDLEMGFEKIVKIAHARGACKRQDALAKIKAEKEKSVQAMEIY
LQVVTSIPGVDSHGANVLNQTIGSIEAIAKSSKEYLQETTDLSPTTAETITRFFRDPKFY
LAPKIG*

Transcript Sequence

Transcript ID

PGSC0003DMT400083248
Transcript Infomation

pacid=37451003 locus=PGSC0003DMG400033140 ID=PGSC0003DMT400083248.v4.03 annot-version=v4.03
Sequence

ATGAATCGAGGATTCAGAGATTCGACGCCATTTTCAAATCCTGCAAGCTTATCGACTTCA
TATAGCAGTGGCGTTTGTATGATGAGTAGCACATGGAGGGATGAACAACACCCTTCCTTT
CTCAATTTCATCTCTTGCTTTCTCAAGGAAAATTCTTTCCGTTTAAATATTGTGCCAATT
GCACCGGATTTTATCTTTAACTGCGGTGGTTTGTCGGTAGCTTTCATGTTTCTGACCAAT
TGGGATGGTGTCGATACAGAATCTTTCTATAGAAAAGTTCAGAAATTGAAGGAGCAGTTT
GCAAACTTCTATGTTGTTATCACCCTTCCTACAAAGGAACAGAATGATTCTTTGATACAC
TCCTATATCAAGTATGGAGTGCAACTTGGAAGGCCAACATTTGTTCCTGTTCGAGATCTG
GAGATGGGCTTCGAAAAAATTGTGAAGATAGCACATGCTCGTGGGGCATGCAAACGCCAG
GATGCATTGGCAAAAATAAAAGCTGAGAAGGAAAAATCAGTACAGGCCATGGAGATTTAC
CTACAAGTGGTTACATCTATACCTGGGGTTGACAGCCATGGCGCAAATGTGCTTAATCAA
ACTATTGGTTCAATTGAAGCAATAGCTAAGTCGTCAAAGGAGTACCTTCAGGAAACTACT
GATCTTTCACCTACAACAGCTGAGACAATCACAAGGTTTTTCCGGGATCCAAAGTTTTAT
CTTGCTCCTAAAATTGGCTGA