Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083244
CDS Infomation

pacid=37452290 polypeptide=PGSC0003DMP400055921 locus=PGSC0003DMG400033138 ID=PGSC0003DMT400083244.v4.03 annot-version=v4.03
Sequence

ATGGGGATTGAACTTCAATTTCAAAGGCTATGCTGTTTGCTGAGCGTTAAAAAATTGTTA
TCAATTTTTGGAATTGTTATAGCTGTTGTTGTGCTGATATCACAATTACTCGCACTTCCA
TATGAGAATTACATATCTCTTCTATCAAATGTGGATGGAGTTGGGCTCGAAGCTGAAACT
GTTTTGGCCACTGATGAGAAGAGGAGTAATGTGGAAGTTGATTCAGTGTTAGGGTTTCAG
AAATTGGGCAACAGTACTTATCTAGAAAAGGGATTGAATGCAAATTCAACTATAGGGTTT
TATTTGAATGTAAATACTTATTCAAGTCTAGGGAAAATGAGGAATGAATCGGCTCAGATT
TTGCAGGTTAAGTCACCTGCAGCTCGTTCAAGTGGTCGGGAGAATGTGATTGCAGATACT
GGTAATAAGACGTCGTCGTTAATGGAAAATGAGGCAACAAGTTCCAATTCTAATATCTTA
CGAGCTGGTATCAACAGTAAGAGAAGAAGACCAGCATCAATCTCCTACATGAACACTTTA
GTGCAGCAGAACTCTAGTATTAGTTTAGTGAGATCACAATGGCGTTCTGCACGTGAAGGG
GAACTCCGATATGCAAAGGTTCAGATTGAAAATGCTCCGATAATTAGAAACATTCCTGAA
CTTCATTCATCTATTTTTCGAAATTATTCCAAGTTTAGGAGGAGCTATGAGCTGATGGAA
CGTGTCCTTAAAGTTTATGTTTATAAAGAAGGGGAAAAACCAATATTCCATCAGCCGTAT
ATGCGAGGTATCTACGCTTCTGAGGGGTGGTTCATGAAACTGATGGAGAAGAACAAACAG
TTTCTTGTGAAAGATCCCAAAAGGGCTCACTTATTTTATTTGCCTTTTAGTTCTTTGAAG
CTACGAGAAGCTCTATCAAAACAAAATTTTACTCATCAGAAAGATTTGGAAAATCATCTG
AGCAATTACATTGGAAGAATTTCTAGAAAATATCATTTCTGGAATAGAAGCAGAGGAGCT
GATCATTTTTTGGTTGCTTGTCATGATTGGGCACCCCGACTCACGAGGAAGAACATGGAA
ACCTGTGTTAGAGTCCTCTGCAATTCAAATATAGCTGGAGGCTTCAAGATAGGGAAGGAT
GTCTCTCTGCCAGTAACCTATGTTCGTTCAGCTGAAGACCCGCTCAAAGATTTGGGAGGA
AATCCTCCTTCAGCAAGACCAGTGCTTGCCTTTTTTGCTGGAGGTATTCATGGTTATCTT
CGTCCTATATTATTGCAACATTGGAGTGAGAAAGAACCTGATATGAAGATTTTTGGGCCT
ATGCCTCGTGATCCTGAGGGTAAAGCAAAATATAGGGAACTTATGAAAAGCAGCAAATAT
TGCATCTGTGCGAAGGGTTATGAAGTCCATACTCCAAGAGTTGTGGAGTCCATACACTAT
GAGTGTGTACCTGTGATCATATCAGATAACTATGTACCGCCTTTCTTTGAAGTTCTCGAC
TGGGAATCATTTTCTGTCTTTGTTTTGGAGAAAGATGTTCCAGACTTGAGAAACATCCTC
CTTTCAATTCCTGAGGAACAGTACATGAAGATGCAGCATAGGCTGAAGATTGTTCAACAG
TATTTCCTTTGGCACAAAAATCCTGTAAAGTACGACTTGTTTCACATGATCCTTCACTCA
ATTTGGTATAACAGAGTATTTCAGGTAAAATCTAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400055921
PEP Infomation

pacid=37452290 transcript=PGSC0003DMT400083244 locus=PGSC0003DMG400033138 ID=PGSC0003DMT400083244.v4.03 annot-version=v4.03
Sequence

MGIELQFQRLCCLLSVKKLLSIFGIVIAVVVLISQLLALPYENYISLLSNVDGVGLEAET
VLATDEKRSNVEVDSVLGFQKLGNSTYLEKGLNANSTIGFYLNVNTYSSLGKMRNESAQI
LQVKSPAARSSGRENVIADTGNKTSSLMENEATSSNSNILRAGINSKRRRPASISYMNTL
VQQNSSISLVRSQWRSAREGELRYAKVQIENAPIIRNIPELHSSIFRNYSKFRRSYELME
RVLKVYVYKEGEKPIFHQPYMRGIYASEGWFMKLMEKNKQFLVKDPKRAHLFYLPFSSLK
LREALSKQNFTHQKDLENHLSNYIGRISRKYHFWNRSRGADHFLVACHDWAPRLTRKNME
TCVRVLCNSNIAGGFKIGKDVSLPVTYVRSAEDPLKDLGGNPPSARPVLAFFAGGIHGYL
RPILLQHWSEKEPDMKIFGPMPRDPEGKAKYRELMKSSKYCICAKGYEVHTPRVVESIHY
ECVPVIISDNYVPPFFEVLDWESFSVFVLEKDVPDLRNILLSIPEEQYMKMQHRLKIVQQ
YFLWHKNPVKYDLFHMILHSIWYNRVFQVKSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400083244
Transcript Infomation

pacid=37452290 locus=PGSC0003DMG400033138 ID=PGSC0003DMT400083244.v4.03 annot-version=v4.03
Sequence

ATGGGGATTGAACTTCAATTTCAAAGGCTATGCTGTTTGCTGAGCGTTAAAAAATTGTTA
TCAATTTTTGGAATTGTTATAGCTGTTGTTGTGCTGATATCACAATTACTCGCACTTCCA
TATGAGAATTACATATCTCTTCTATCAAATGTGGATGGAGTTGGGCTCGAAGCTGAAACT
GTTTTGGCCACTGATGAGAAGAGGAGTAATGTGGAAGTTGATTCAGTGTTAGGGTTTCAG
AAATTGGGCAACAGTACTTATCTAGAAAAGGGATTGAATGCAAATTCAACTATAGGGTTT
TATTTGAATGTAAATACTTATTCAAGTCTAGGGAAAATGAGGAATGAATCGGCTCAGATT
TTGCAGGTTAAGTCACCTGCAGCTCGTTCAAGTGGTCGGGAGAATGTGATTGCAGATACT
GGTAATAAGACGTCGTCGTTAATGGAAAATGAGGCAACAAGTTCCAATTCTAATATCTTA
CGAGCTGGTATCAACAGTAAGAGAAGAAGACCAGCATCAATCTCCTACATGAACACTTTA
GTGCAGCAGAACTCTAGTATTAGTTTAGTGAGATCACAATGGCGTTCTGCACGTGAAGGG
GAACTCCGATATGCAAAGGTTCAGATTGAAAATGCTCCGATAATTAGAAACATTCCTGAA
CTTCATTCATCTATTTTTCGAAATTATTCCAAGTTTAGGAGGAGCTATGAGCTGATGGAA
CGTGTCCTTAAAGTTTATGTTTATAAAGAAGGGGAAAAACCAATATTCCATCAGCCGTAT
ATGCGAGGTATCTACGCTTCTGAGGGGTGGTTCATGAAACTGATGGAGAAGAACAAACAG
TTTCTTGTGAAAGATCCCAAAAGGGCTCACTTATTTTATTTGCCTTTTAGTTCTTTGAAG
CTACGAGAAGCTCTATCAAAACAAAATTTTACTCATCAGAAAGATTTGGAAAATCATCTG
AGCAATTACATTGGAAGAATTTCTAGAAAATATCATTTCTGGAATAGAAGCAGAGGAGCT
GATCATTTTTTGGTTGCTTGTCATGATTGGGCACCCCGACTCACGAGGAAGAACATGGAA
ACCTGTGTTAGAGTCCTCTGCAATTCAAATATAGCTGGAGGCTTCAAGATAGGGAAGGAT
GTCTCTCTGCCAGTAACCTATGTTCGTTCAGCTGAAGACCCGCTCAAAGATTTGGGAGGA
AATCCTCCTTCAGCAAGACCAGTGCTTGCCTTTTTTGCTGGAGGTATTCATGGTTATCTT
CGTCCTATATTATTGCAACATTGGAGTGAGAAAGAACCTGATATGAAGATTTTTGGGCCT
ATGCCTCGTGATCCTGAGGGTAAAGCAAAATATAGGGAACTTATGAAAAGCAGCAAATAT
TGCATCTGTGCGAAGGGTTATGAAGTCCATACTCCAAGAGTTGTGGAGTCCATACACTAT
GAGTGTGTACCTGTGATCATATCAGATAACTATGTACCGCCTTTCTTTGAAGTTCTCGAC
TGGGAATCATTTTCTGTCTTTGTTTTGGAGAAAGATGTTCCAGACTTGAGAAACATCCTC
CTTTCAATTCCTGAGGAACAGTACATGAAGATGCAGCATAGGCTGAAGATTGTTCAACAG
TATTTCCTTTGGCACAAAAATCCTGTAAAGTACGACTTGTTTCACATGATCCTTCACTCA
ATTTGGTATAACAGAGTATTTCAGGTAAAATCTAAATAA