Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083223
CDS Infomation

pacid=37449724 polypeptide=PGSC0003DMP400055902 locus=PGSC0003DMG400033129 ID=PGSC0003DMT400083223.v4.03 annot-version=v4.03
Sequence

ATGGGCTGTATTTGTTCAAAGGGTTCTTCAACAGATCATGATGATGTTGTTGAACATGCA
AAGGAAAAAGAAATACAAGTTGATAAATCTTCTGTACAGTTGGTTGCTCCATCAGTAAGG
GAAGAGATTAAAGAAATAGTTAAACCCAATGTAACATCAGAAGATAATGGTGTTACAACA
AAAGTTGATGATAATGAGAAAACTAGGATTAGGGAGAGGCCTAAGGACGGACGATTCAAG
AGACAATCGACGATGGATTTTGGACTGATACGATCAAGGTCTCGAGTTGTTAACATGCCT
CATGGTGCAATAGGGGTGCTGTGTGCTGCAGGTTGGCCATTATGGCTAAGTTCAGTTGCA
CAAGAGGCTATTCAAGGGTGGGTTCCTCGAAGTGCGGAATCATTTGAAAAATTGAACAAA
ATTGGTCAAGGAACATATAGTAATGTTTACAAGGCCCGTGACCTTGAAACCGACAAAATT
GTTGCAATGAAGAAAGTAAAATTTGTCAATATGGATCCTGAGAGTGTTCGTTTTATGGCG
AGAGAGATTTGTATTTTGCGTAGATTGGACCACCCAAATGTAATGAAACTTGAGGCTTTG
GTCACATCCAGGATTTCAGGCAGTATATATCTTGTATTCGAATACATGGAGCACGATCTT
GCTGGACTTTCATCAGCACCTGGGATCAAGTTCACTGAACCACAGATAAAATGTTATATG
CAACAAATGCTTTTGGGACTCGAACACTGTCATAGTCGGGGTATACTTCATCGAGACATT
AAAGGTTCAAATCTTCTAATTGGTGATAATGGTGTTCTAAAGATTGGAGATTTTGGTCTG
GCGACGTCTTTTAAGTCCAACCAAAAGCAGCCATTAACAAGTCGTGTTGTAACACTGTGG
TATAGGGCTCCTGAGCTTTTGCTTGGTGCAACAGAATATGGAGTGGCCATTGATATGTGG
AGTGCTGGCTGCATCCTTGCTGAATTATTTAATGGAAAGCCTATCATGCCTGGAAGAACA
GAGGTGGAGCAAATGCATAAAATATTCAAGCTTTGTGGTTCACCTTCTGAGGAGTACTGG
AGTAAATCAAAACTTCCACTTGCTACTAGTTTTAAGCAACAGAATCCATATAAGCGCGGT
ATTGCTGATACATTCAAGGACTTGCCTCCGACAGCTTTGGCCCTTGTTGACACCTTACTT
TCAATAGAACCAGAAAACCGCGGCACTGCTTCTTGTGCACTCAATAGTGAGTTCTTCAAA
GCGAATCCCCTACCTTGTGATCCATATAGTTTACCAAAGTATCCTCCAAGCAAGGAATAC
GATACTAAGGTTCGACATCAAGAAGCAAGAAGGCGAAAGGCTGAGGCTGGAAAAGGACAT
GGAGCTGAAACAACAAAGAAGTCATCGGGACAAGCAAAGGAAGAACTGGCAACAGAATTC
AATGCTCACGGACAGGGACAGACGAGCAAAAGCATCCGAGTGAAATACAATGCTCTCGAG
GACAATAGAGCTGGTTTCTCTATAGAGCCACCAGCATTGAGATACGGACTCACTCATTCT
AATTCAGTGATCCATCCTAATACATCTGGTTACACATGGACTAACAAAGCAAAGGAGGAT
TCAAGTGCAATCAATGAACGGGCATATCCCGCTTCCCAACATGGTGTAGAGTTTTCAAGG
CAGGGTTCTCACAAGCCTCGAGCTGCAGGAGAGTTTTCAAGCATTCGTTCAAGGAGAGAT
GATAGGTCATCTGGTGGAGATTCCACGGTTTATGTGCCAAAGAGAAGCAGACTCCTGCAC
TCTGGACCACTAATGCCACAAGGGGGAAGTATGGAAGACATGTTAAAGGAACACGAGAGA
CAAATTCAAGAAGCAGTTAGGAAAGCACGTCAAGACAAGACAAGGCCCGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400055902
PEP Infomation

pacid=37449724 transcript=PGSC0003DMT400083223 locus=PGSC0003DMG400033129 ID=PGSC0003DMT400083223.v4.03 annot-version=v4.03
Sequence

MGCICSKGSSTDHDDVVEHAKEKEIQVDKSSVQLVAPSVREEIKEIVKPNVTSEDNGVTT
KVDDNEKTRIRERPKDGRFKRQSTMDFGLIRSRSRVVNMPHGAIGVLCAAGWPLWLSSVA
QEAIQGWVPRSAESFEKLNKIGQGTYSNVYKARDLETDKIVAMKKVKFVNMDPESVRFMA
REICILRRLDHPNVMKLEALVTSRISGSIYLVFEYMEHDLAGLSSAPGIKFTEPQIKCYM
QQMLLGLEHCHSRGILHRDIKGSNLLIGDNGVLKIGDFGLATSFKSNQKQPLTSRVVTLW
YRAPELLLGATEYGVAIDMWSAGCILAELFNGKPIMPGRTEVEQMHKIFKLCGSPSEEYW
SKSKLPLATSFKQQNPYKRGIADTFKDLPPTALALVDTLLSIEPENRGTASCALNSEFFK
ANPLPCDPYSLPKYPPSKEYDTKVRHQEARRRKAEAGKGHGAETTKKSSGQAKEELATEF
NAHGQGQTSKSIRVKYNALEDNRAGFSIEPPALRYGLTHSNSVIHPNTSGYTWTNKAKED
SSAINERAYPASQHGVEFSRQGSHKPRAAGEFSSIRSRRDDRSSGGDSTVYVPKRSRLLH
SGPLMPQGGSMEDMLKEHERQIQEAVRKARQDKTRPE*

Transcript Sequence

Transcript ID

PGSC0003DMT400083223
Transcript Infomation

pacid=37449724 locus=PGSC0003DMG400033129 ID=PGSC0003DMT400083223.v4.03 annot-version=v4.03
Sequence

ATGGGCTGTATTTGTTCAAAGGGTTCTTCAACAGATCATGATGATGTTGTTGAACATGCA
AAGGAAAAAGAAATACAAGTTGATAAATCTTCTGTACAGTTGGTTGCTCCATCAGTAAGG
GAAGAGATTAAAGAAATAGTTAAACCCAATGTAACATCAGAAGATAATGGTGTTACAACA
AAAGTTGATGATAATGAGAAAACTAGGATTAGGGAGAGGCCTAAGGACGGACGATTCAAG
AGACAATCGACGATGGATTTTGGACTGATACGATCAAGGTCTCGAGTTGTTAACATGCCT
CATGGTGCAATAGGGGTGCTGTGTGCTGCAGGTTGGCCATTATGGCTAAGTTCAGTTGCA
CAAGAGGCTATTCAAGGGTGGGTTCCTCGAAGTGCGGAATCATTTGAAAAATTGAACAAA
ATTGGTCAAGGAACATATAGTAATGTTTACAAGGCCCGTGACCTTGAAACCGACAAAATT
GTTGCAATGAAGAAAGTAAAATTTGTCAATATGGATCCTGAGAGTGTTCGTTTTATGGCG
AGAGAGATTTGTATTTTGCGTAGATTGGACCACCCAAATGTAATGAAACTTGAGGCTTTG
GTCACATCCAGGATTTCAGGCAGTATATATCTTGTATTCGAATACATGGAGCACGATCTT
GCTGGACTTTCATCAGCACCTGGGATCAAGTTCACTGAACCACAGATAAAATGTTATATG
CAACAAATGCTTTTGGGACTCGAACACTGTCATAGTCGGGGTATACTTCATCGAGACATT
AAAGGTTCAAATCTTCTAATTGGTGATAATGGTGTTCTAAAGATTGGAGATTTTGGTCTG
GCGACGTCTTTTAAGTCCAACCAAAAGCAGCCATTAACAAGTCGTGTTGTAACACTGTGG
TATAGGGCTCCTGAGCTTTTGCTTGGTGCAACAGAATATGGAGTGGCCATTGATATGTGG
AGTGCTGGCTGCATCCTTGCTGAATTATTTAATGGAAAGCCTATCATGCCTGGAAGAACA
GAGGTGGAGCAAATGCATAAAATATTCAAGCTTTGTGGTTCACCTTCTGAGGAGTACTGG
AGTAAATCAAAACTTCCACTTGCTACTAGTTTTAAGCAACAGAATCCATATAAGCGCGGT
ATTGCTGATACATTCAAGGACTTGCCTCCGACAGCTTTGGCCCTTGTTGACACCTTACTT
TCAATAGAACCAGAAAACCGCGGCACTGCTTCTTGTGCACTCAATAGTGAGTTCTTCAAA
GCGAATCCCCTACCTTGTGATCCATATAGTTTACCAAAGTATCCTCCAAGCAAGGAATAC
GATACTAAGGTTCGACATCAAGAAGCAAGAAGGCGAAAGGCTGAGGCTGGAAAAGGACAT
GGAGCTGAAACAACAAAGAAGTCATCGGGACAAGCAAAGGAAGAACTGGCAACAGAATTC
AATGCTCACGGACAGGGACAGACGAGCAAAAGCATCCGAGTGAAATACAATGCTCTCGAG
GACAATAGAGCTGGTTTCTCTATAGAGCCACCAGCATTGAGATACGGACTCACTCATTCT
AATTCAGTGATCCATCCTAATACATCTGGTTACACATGGACTAACAAAGCAAAGGAGGAT
TCAAGTGCAATCAATGAACGGGCATATCCCGCTTCCCAACATGGTGTAGAGTTTTCAAGG
CAGGGTTCTCACAAGCCTCGAGCTGCAGGAGAGTTTTCAAGCATTCGTTCAAGGAGAGAT
GATAGGTCATCTGGTGGAGATTCCACGGTTTATGTGCCAAAGAGAAGCAGACTCCTGCAC
TCTGGACCACTAATGCCACAAGGGGGAAGTATGGAAGACATGTTAAAGGAACACGAGAGA
CAAATTCAAGAAGCAGTTAGGAAAGCACGTCAAGACAAGACAAGGCCCGAATAG