Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083220
CDS Infomation

pacid=37451827 polypeptide=PGSC0003DMP400055899 locus=PGSC0003DMG400033127 ID=PGSC0003DMT400083220.v4.03 annot-version=v4.03
Sequence

ATGCCCACCATTGATTTAAGCAGAACACCTTTATGTGTCACTCTTTTTCCTTCTTTTCAA
CAAGGACCCAAGATTCAATTTTCCCTTACAAATTCATCTGTTAATTCGTTTTTGTATAGT
TTCAAACCCAAACGATTTCATTTCTTGAAACCATGTTCTTCCCTAAAGGAAACCAAGAAA
CAGCAGACCCTTTTGAAGACACCAAACAAATCTCCTCAGAGTTTCAGGAGATTGCTTAAC
TTGAACCCCAAAAATGATGATGGTGCGAGTGAGAGGGATAGTGGGTCAGGAGATGATGAT
ACTGCTATTAAAGGTACCATTTTGGCTGGTCTTTTGATTGTGGGTGTGATTGGTGGATTT
GGAACTGTTGGGTACATATACAAGGACCAGATTAATGTTTTCTTGAACCAGTTTTCTGGC
ATTATTGAAGGTTATGGGCCAGCTGGATATGCTCTTTTTGTTGCAGTTTATGCTGGACTA
GAAATCCTTGCAATACCTGCCATTCCGTTGACCATGTCGGCTGGTCTTCTATTTGGCACT
GTCACTGGGACCATCATTGTTTCCATTGGTGGAACGGTGGCGGCAAGTGTTGCGTTCTTG
ATTGCCAGATATTTTGCTCGTGAACGTATTCTTAAGCTGGTCGAAGGGAACAAGAAATTT
CTCGCAATAGACAAAGCAATTGGAGAAAATGGTTTCAAAGTTGTTACTCTTCTCCGTTTG
AGCCCTTTGCTTCCATTTTCTCTTGGGAATTATCTTTATGGACTTACTTCAGTCGAGTTT
GTACCATATGTTCTAGGAAGTTGGCTTGGAATGCTTCCTGGATCATGGGCTTACGTGAGT
GCAGGTGCATTTGGCCGTGCAATTCTTCAAGAAGGATCTGAAATCGGCCTAGGAGGAAAC
CAGCTATTGACCCTTGGAGTTGGTTTATTGTTTACAGCATTTGCTGCAACTTATGTAACA
CGGCTCGCTAAGGACGCTGTAAAAGACATTGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055899
PEP Infomation

pacid=37451827 transcript=PGSC0003DMT400083220 locus=PGSC0003DMG400033127 ID=PGSC0003DMT400083220.v4.03 annot-version=v4.03
Sequence

MPTIDLSRTPLCVTLFPSFQQGPKIQFSLTNSSVNSFLYSFKPKRFHFLKPCSSLKETKK
QQTLLKTPNKSPQSFRRLLNLNPKNDDGASERDSGSGDDDTAIKGTILAGLLIVGVIGGF
GTVGYIYKDQINVFLNQFSGIIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGT
VTGTIIVSIGGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRL
SPLLPFSLGNYLYGLTSVEFVPYVLGSWLGMLPGSWAYVSAGAFGRAILQEGSEIGLGGN
QLLTLGVGLLFTAFAATYVTRLAKDAVKDIE*

Transcript Sequence

Transcript ID

PGSC0003DMT400083220
Transcript Infomation

pacid=37451827 locus=PGSC0003DMG400033127 ID=PGSC0003DMT400083220.v4.03 annot-version=v4.03
Sequence

ATGCCCACCATTGATTTAAGCAGAACACCTTTATGTGTCACTCTTTTTCCTTCTTTTCAA
CAAGGACCCAAGATTCAATTTTCCCTTACAAATTCATCTGTTAATTCGTTTTTGTATAGT
TTCAAACCCAAACGATTTCATTTCTTGAAACCATGTTCTTCCCTAAAGGAAACCAAGAAA
CAGCAGACCCTTTTGAAGACACCAAACAAATCTCCTCAGAGTTTCAGGAGATTGCTTAAC
TTGAACCCCAAAAATGATGATGGTGCGAGTGAGAGGGATAGTGGGTCAGGAGATGATGAT
ACTGCTATTAAAGGTACCATTTTGGCTGGTCTTTTGATTGTGGGTGTGATTGGTGGATTT
GGAACTGTTGGGTACATATACAAGGACCAGATTAATGTTTTCTTGAACCAGTTTTCTGGC
ATTATTGAAGGTTATGGGCCAGCTGGATATGCTCTTTTTGTTGCAGTTTATGCTGGACTA
GAAATCCTTGCAATACCTGCCATTCCGTTGACCATGTCGGCTGGTCTTCTATTTGGCACT
GTCACTGGGACCATCATTGTTTCCATTGGTGGAACGGTGGCGGCAAGTGTTGCGTTCTTG
ATTGCCAGATATTTTGCTCGTGAACGTATTCTTAAGCTGGTCGAAGGGAACAAGAAATTT
CTCGCAATAGACAAAGCAATTGGAGAAAATGGTTTCAAAGTTGTTACTCTTCTCCGTTTG
AGCCCTTTGCTTCCATTTTCTCTTGGGAATTATCTTTATGGACTTACTTCAGTCGAGTTT
GTACCATATGTTCTAGGAAGTTGGCTTGGAATGCTTCCTGGATCATGGGCTTACGTGAGT
GCAGGTGCATTTGGCCGTGCAATTCTTCAAGAAGGATCTGAAATCGGCCTAGGAGGAAAC
CAGCTATTGACCCTTGGAGTTGGTTTATTGTTTACAGCATTTGCTGCAACTTATGTAACA
CGGCTCGCTAAGGACGCTGTAAAAGACATTGAGTAA