Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083202
CDS Infomation

pacid=37441476 polypeptide=PGSC0003DMP400055891 locus=PGSC0003DMG400033115 ID=PGSC0003DMT400083202.v4.03 annot-version=v4.03
Sequence

ATGCAGCTGTTAAATGCAGTGGAAATTGCTAGAATGACTATGAGGGCACCTAATTCTTTA
GGTGCAGAAATTGCATTTGGGACTGTTACATGGTTTGTATATGCTGGGATCTCATGTTTC
TTGGTACTATTTGCTGGAATTATGTCTGGTTTAACATTGGGTCTTATGTCTTTGGGGCTT
GTTGAACTTGAGATCCTTCAACGTAGTGGAACCCCTCTTGAGAAAAAACAAGCAGCTACA
ATATTTCCTGTTGTTCAGAAGCAACACCAGCTTCTTGTGACCCTTCTTCTATGCAACGCT
GCTTCGATGGAGGCACTACCTATATACCTGGACAAAATTTTCAACCAATATGTGGCCATT
ATACTATCAGTAACTTTTGTTTTGGCATTTGGAGAGGTTATTCCTCAAGCCATATGCACC
AGATATGGACTTGCCGTAGGTGCAAGCCTTGTCTGGCTTGTTCGTGTTCTGATGGTTCTA
TGCTACCCAATTGCTTACCCTATAGGAAAGATCCTGGACTGCGTGTTGGGACACAATGAA
GTACTATTCAGACGTGCTCAGCTGAAAGCCCTTGTTTCTATTCACGGCCAAGAGGCTGGC
AAGGGAGGTGAACTTACACATGATGAGACAACAATCATTAGTGGAGCACTGGATTTGACT
GAGAAGACTGCTGAGGAGGCAATGACGCCCATTGAGTCAACATTTTCATTGGATGTCAAT
TCAAAGCTGGACTGGGAGGCAATGGGAAAAGTTCTTGCTAGGGGTCATAGCAGAGTTCCT
GTGTACTCAGGCAATCCAAAGAATATTATTGGTCTACTTCTGGTAAAAAGTCTTCTTACA
GTGCGGCCGGAAACAGAGACGCCAGTTAGTTCTGTTTCAATTCGAAGAATTCCACGAGTT
CCTGCTGATATGCCATTGTATGACATACTAAATGAGTTCCAAAAGGGTAGCAGTCATATG
GCTGCAGTAGTGAAGATTAGAGGAAAAAGCAAAAAGCCTCCCTTGGTCATTGAGGAAGAG
AATTCTCAGGATGTTGCAGTCACTGGTGAAAGTTCTCTGTTAACTATACCTCGCTTGAAA
GCAAAGAATGATAAATCAGATAGTGTTGTTGTTGAGATTGAAAAAGTTACAGTACCAGCA
GCAGTAACCTTACCGACATCTGGTGACTCACTGACAAATGCATCGATTCCCTCATCAGAT
GATATTGAGGATGGTGAAGTAATAGGTATTATCACATTGGAAGATGTATTTGAAGAACTT
TTACAGGAGGAAATAGTAGACGAGACCGATGAATATGTTGACGTACATAGAAGGATACGC
GTGGCTGCTGCAGCAGTTGCTTCAGTTGTGGCACGAGCTCCATCAATTCGTAGATTAACA
GCCCAAAAGGCAGCTGGAGGCCAAAATAAGGAAGGACATAGCCCCAAGAAGTCCAGTGAG
GACTCTTCTACCTCAAGAAGAATACAAGGGAGTCTTAGAGAGCCTCTCCTTGAGAACAAG
AGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400055891
PEP Infomation

pacid=37441476 transcript=PGSC0003DMT400083202 locus=PGSC0003DMG400033115 ID=PGSC0003DMT400083202.v4.03 annot-version=v4.03
Sequence

MQLLNAVEIARMTMRAPNSLGAEIAFGTVTWFVYAGISCFLVLFAGIMSGLTLGLMSLGL
VELEILQRSGTPLEKKQAATIFPVVQKQHQLLVTLLLCNAASMEALPIYLDKIFNQYVAI
ILSVTFVLAFGEVIPQAICTRYGLAVGASLVWLVRVLMVLCYPIAYPIGKILDCVLGHNE
VLFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVN
SKLDWEAMGKVLARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSSVSIRRIPRV
PADMPLYDILNEFQKGSSHMAAVVKIRGKSKKPPLVIEEENSQDVAVTGESSLLTIPRLK
AKNDKSDSVVVEIEKVTVPAAVTLPTSGDSLTNASIPSSDDIEDGEVIGIITLEDVFEEL
LQEEIVDETDEYVDVHRRIRVAAAAVASVVARAPSIRRLTAQKAAGGQNKEGHSPKKSSE
DSSTSRRIQGSLREPLLENKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400083202
Transcript Infomation

pacid=37441476 locus=PGSC0003DMG400033115 ID=PGSC0003DMT400083202.v4.03 annot-version=v4.03
Sequence

ATGCAGCTGTTAAATGCAGTGGAAATTGCTAGAATGACTATGAGGGCACCTAATTCTTTA
GGTGCAGAAATTGCATTTGGGACTGTTACATGGTTTGTATATGCTGGGATCTCATGTTTC
TTGGTACTATTTGCTGGAATTATGTCTGGTTTAACATTGGGTCTTATGTCTTTGGGGCTT
GTTGAACTTGAGATCCTTCAACGTAGTGGAACCCCTCTTGAGAAAAAACAAGCAGCTACA
ATATTTCCTGTTGTTCAGAAGCAACACCAGCTTCTTGTGACCCTTCTTCTATGCAACGCT
GCTTCGATGGAGGCACTACCTATATACCTGGACAAAATTTTCAACCAATATGTGGCCATT
ATACTATCAGTAACTTTTGTTTTGGCATTTGGAGAGGTTATTCCTCAAGCCATATGCACC
AGATATGGACTTGCCGTAGGTGCAAGCCTTGTCTGGCTTGTTCGTGTTCTGATGGTTCTA
TGCTACCCAATTGCTTACCCTATAGGAAAGATCCTGGACTGCGTGTTGGGACACAATGAA
GTACTATTCAGACGTGCTCAGCTGAAAGCCCTTGTTTCTATTCACGGCCAAGAGGCTGGC
AAGGGAGGTGAACTTACACATGATGAGACAACAATCATTAGTGGAGCACTGGATTTGACT
GAGAAGACTGCTGAGGAGGCAATGACGCCCATTGAGTCAACATTTTCATTGGATGTCAAT
TCAAAGCTGGACTGGGAGGCAATGGGAAAAGTTCTTGCTAGGGGTCATAGCAGAGTTCCT
GTGTACTCAGGCAATCCAAAGAATATTATTGGTCTACTTCTGGTAAAAAGTCTTCTTACA
GTGCGGCCGGAAACAGAGACGCCAGTTAGTTCTGTTTCAATTCGAAGAATTCCACGAGTT
CCTGCTGATATGCCATTGTATGACATACTAAATGAGTTCCAAAAGGGTAGCAGTCATATG
GCTGCAGTAGTGAAGATTAGAGGAAAAAGCAAAAAGCCTCCCTTGGTCATTGAGGAAGAG
AATTCTCAGGATGTTGCAGTCACTGGTGAAAGTTCTCTGTTAACTATACCTCGCTTGAAA
GCAAAGAATGATAAATCAGATAGTGTTGTTGTTGAGATTGAAAAAGTTACAGTACCAGCA
GCAGTAACCTTACCGACATCTGGTGACTCACTGACAAATGCATCGATTCCCTCATCAGAT
GATATTGAGGATGGTGAAGTAATAGGTATTATCACATTGGAAGATGTATTTGAAGAACTT
TTACAGGAGGAAATAGTAGACGAGACCGATGAATATGTTGACGTACATAGAAGGATACGC
GTGGCTGCTGCAGCAGTTGCTTCAGTTGTGGCACGAGCTCCATCAATTCGTAGATTAACA
GCCCAAAAGGCAGCTGGAGGCCAAAATAAGGAAGGACATAGCCCCAAGAAGTCCAGTGAG
GACTCTTCTACCTCAAGAAGAATACAAGGGAGTCTTAGAGAGCCTCTCCTTGAGAACAAG
AGATAA