Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083168
CDS Infomation

pacid=37450576 polypeptide=PGSC0003DMP400055868 locus=PGSC0003DMG400033089 ID=PGSC0003DMT400083168.v4.03 annot-version=v4.03
Sequence

ATGGTGCAAAAAAGGCCATACAGTGAAGAAAAGTTGTATGAGGTTTCATCTAAGCAGCCG
AGACATGTAGAACCGAGTAGTCAGCTAGTTTCCTTTTTGCAGTTTCCGTGTGAATCAGTG
GCTCCTAACTCTTACACTTCAGGTGGAGATAAGGAGAAATTTTCAGAAGTCAAAGCTTTC
AGTGAGAAGAGACCTGATAGTTGCGATGTGGCTGCAGTTCCTGTTTCTTCCGAGAAAGCA
ATTGAGACGAGCATTCATGGCTCTGCTTCAAACTCTTCTTGGACCTCTGGTAGCACCAGC
AAAGAAGACATCAGGTCCGAGGTGCCTTTTCATGTATTGACGGCTTCTAAATATTACAAT
ACTGATCCTTCATTCAGAGTTGTTATTCATCCAATGGAGGTCTATTCCCCTCTTTTGAAC
AATCCTCCTCGGAAATCGGTTCCCATTGGACCAGATTTCCAAGCCGAATTACCAGAATGG
GGTGCATATGATTGTAAAAATATATCCATGAAGGAGAGCACTCAAGAAAGCCCAAATCTT
CCATCTCAAGCTCTAGAATCAGGTTTTGTGGATCATCATGATGAAGAAAATAAACTTGCT
GGGACATGTATCATTCCAATGCCTAAATTGGAATTACCTGCAGACCACGAGGAGAATGTT
GGAGCAGGAAAAATTGGGTGTTCCTGTGAAGATGCTGGTTCCTTTGGATGTGTTCGGCTG
CACATCATGGAAGCAAGGGAGAAACTTAAGGCGGCCTTGGGTGAGGAAACATTTGTTAGG
TTGGGTGTTTATGATATGGGAGAGATAGTGGCAGCGAAATGGAGTGATGAGGAAGAGGAA
TTATTTCATGAAGTTGTATTTTCCAATCCTGCAGCACTAGGCAAGAATTTCTGGGAGCAC
CTTGCTGTTGAATTTCCTTCACGGAGCAAGAGAGATCTCGTTAGCTATTACTTCAATGTC
TTTATTTTGCGGAAGCGTGCCAAGCAGAATAGGTTTGACCCATCAAATATAGACAGTGAT
AACGATGAATGGCAGGAGATCGATGACGATGTTGTTGCTACGGGAGCTCAAATGACAGAT
GAAGATGAGGATTCTATGGTTGAATCACCAATATATCAAAATTATCCTGGTCACAATGAG
ATATATGTGACTGAAAAACAAGCATATGATGAAGAAGCTGGTGTTGCAACCTTTGAAGAT
TATCGGACGATAAACTTTTGCAGGAGGAAGGTCTTGAGTGATGCGTCAAAAGCATGTCCC
GATGAATTGATTGATAATAACAGTAGTTGTGGACACAATATTCAGCCTCTAGACAGACAT
CATTCAAATGAAGTGGGTAACCCTGATGTCGAAGATAACTCTTGTACCACTGATGCAGCT
GGGGCTTCTTCAGAAACACCACAGGTAAAAACTGATGATTGTAAACACTGGGCAAGTCAT
TTTGCTGGTGTTGGCATTGGCAGTGTGCATGATTTTGTGATGGAGCCATCTAATGGTAAA
GAGTGGGACACGGGGTACTTAAGCTGTGCTAAGAATGAAGTTGATTTGTTACCAACCTGC
TCTATGATTGAGGAAGTGTTTGGAGACGAAGCCTGGAGTTCCAAGAACAGAGATGGTCAC
AGTTTAAGCAGGCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055868
PEP Infomation

pacid=37450576 transcript=PGSC0003DMT400083168 locus=PGSC0003DMG400033089 ID=PGSC0003DMT400083168.v4.03 annot-version=v4.03
Sequence

MVQKRPYSEEKLYEVSSKQPRHVEPSSQLVSFLQFPCESVAPNSYTSGGDKEKFSEVKAF
SEKRPDSCDVAAVPVSSEKAIETSIHGSASNSSWTSGSTSKEDIRSEVPFHVLTASKYYN
TDPSFRVVIHPMEVYSPLLNNPPRKSVPIGPDFQAELPEWGAYDCKNISMKESTQESPNL
PSQALESGFVDHHDEENKLAGTCIIPMPKLELPADHEENVGAGKIGCSCEDAGSFGCVRL
HIMEAREKLKAALGEETFVRLGVYDMGEIVAAKWSDEEEELFHEVVFSNPAALGKNFWEH
LAVEFPSRSKRDLVSYYFNVFILRKRAKQNRFDPSNIDSDNDEWQEIDDDVVATGAQMTD
EDEDSMVESPIYQNYPGHNEIYVTEKQAYDEEAGVATFEDYRTINFCRRKVLSDASKACP
DELIDNNSSCGHNIQPLDRHHSNEVGNPDVEDNSCTTDAAGASSETPQVKTDDCKHWASH
FAGVGIGSVHDFVMEPSNGKEWDTGYLSCAKNEVDLLPTCSMIEEVFGDEAWSSKNRDGH
SLSRH*

Transcript Sequence

Transcript ID

PGSC0003DMT400083168
Transcript Infomation

pacid=37450576 locus=PGSC0003DMG400033089 ID=PGSC0003DMT400083168.v4.03 annot-version=v4.03
Sequence

ATGGTGCAAAAAAGGCCATACAGTGAAGAAAAGTTGTATGAGGTTTCATCTAAGCAGCCG
AGACATGTAGAACCGAGTAGTCAGCTAGTTTCCTTTTTGCAGTTTCCGTGTGAATCAGTG
GCTCCTAACTCTTACACTTCAGGTGGAGATAAGGAGAAATTTTCAGAAGTCAAAGCTTTC
AGTGAGAAGAGACCTGATAGTTGCGATGTGGCTGCAGTTCCTGTTTCTTCCGAGAAAGCA
ATTGAGACGAGCATTCATGGCTCTGCTTCAAACTCTTCTTGGACCTCTGGTAGCACCAGC
AAAGAAGACATCAGGTCCGAGGTGCCTTTTCATGTATTGACGGCTTCTAAATATTACAAT
ACTGATCCTTCATTCAGAGTTGTTATTCATCCAATGGAGGTCTATTCCCCTCTTTTGAAC
AATCCTCCTCGGAAATCGGTTCCCATTGGACCAGATTTCCAAGCCGAATTACCAGAATGG
GGTGCATATGATTGTAAAAATATATCCATGAAGGAGAGCACTCAAGAAAGCCCAAATCTT
CCATCTCAAGCTCTAGAATCAGGTTTTGTGGATCATCATGATGAAGAAAATAAACTTGCT
GGGACATGTATCATTCCAATGCCTAAATTGGAATTACCTGCAGACCACGAGGAGAATGTT
GGAGCAGGAAAAATTGGGTGTTCCTGTGAAGATGCTGGTTCCTTTGGATGTGTTCGGCTG
CACATCATGGAAGCAAGGGAGAAACTTAAGGCGGCCTTGGGTGAGGAAACATTTGTTAGG
TTGGGTGTTTATGATATGGGAGAGATAGTGGCAGCGAAATGGAGTGATGAGGAAGAGGAA
TTATTTCATGAAGTTGTATTTTCCAATCCTGCAGCACTAGGCAAGAATTTCTGGGAGCAC
CTTGCTGTTGAATTTCCTTCACGGAGCAAGAGAGATCTCGTTAGCTATTACTTCAATGTC
TTTATTTTGCGGAAGCGTGCCAAGCAGAATAGGTTTGACCCATCAAATATAGACAGTGAT
AACGATGAATGGCAGGAGATCGATGACGATGTTGTTGCTACGGGAGCTCAAATGACAGAT
GAAGATGAGGATTCTATGGTTGAATCACCAATATATCAAAATTATCCTGGTCACAATGAG
ATATATGTGACTGAAAAACAAGCATATGATGAAGAAGCTGGTGTTGCAACCTTTGAAGAT
TATCGGACGATAAACTTTTGCAGGAGGAAGGTCTTGAGTGATGCGTCAAAAGCATGTCCC
GATGAATTGATTGATAATAACAGTAGTTGTGGACACAATATTCAGCCTCTAGACAGACAT
CATTCAAATGAAGTGGGTAACCCTGATGTCGAAGATAACTCTTGTACCACTGATGCAGCT
GGGGCTTCTTCAGAAACACCACAGGTAAAAACTGATGATTGTAAACACTGGGCAAGTCAT
TTTGCTGGTGTTGGCATTGGCAGTGTGCATGATTTTGTGATGGAGCCATCTAATGGTAAA
GAGTGGGACACGGGGTACTTAAGCTGTGCTAAGAATGAAGTTGATTTGTTACCAACCTGC
TCTATGATTGAGGAAGTGTTTGGAGACGAAGCCTGGAGTTCCAAGAACAGAGATGGTCAC
AGTTTAAGCAGGCATTGA