Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083147
CDS Infomation

pacid=37450458 polypeptide=PGSC0003DMP400055847 locus=PGSC0003DMG400033077 ID=PGSC0003DMT400083147.v4.03 annot-version=v4.03
Sequence

ATGGAATTGCAGGGGGGAATCCCTCTGCTAATGCAGCAATACAAAGCATTATTTAAGAAA
AATGTGTTGCTTGCATTGCGTAACAAGCCCGCAACATTCCTACAGCTCTTCTCGTCTTTC
TTCTTCATTTTCCTTCTATTCTGCATTAAATTATCTGATGAATCGCGCAATGCAGATAAC
AGCTATGCTAAAGAATTGCGCGATCCTAAACCTCTTATGGCGCCACCTATCCCACCTTGC
GAGGACAAGTTTTATATTAAGACTCCATGCTATGATTTCATTTGGAGTGGAAAACATAGT
AAAACTATAGGGGATGTTGTTAAGGGAATTATGGCAAATAATCCTGGTAGGCCTATTCCT
GCCAACAAGGTTCTAGCATTTAACACGGCAAAGGATGTGGATAAATGGCTTTTTGATAAT
CCTGTGCGTTGTCCTGCAGCTGTGCACTTTACAATAGTGAAGGGGAATAAAATTAGTTAT
GGTATTCAGACAAACTCCACGGATGTAGTGAAACGAGGAGTAACTGAAGATCCAACTTTT
AAGTTCCAAATCCCACTTCAAATAGCAGCAGAACGTGAAATCGCAAGAAATCTGATTGGA
GATCCAAAATTCCCCTGGGATGTCAGTTTTAAAGAATTTCCGCATCCTCCTGGTGAAATA
TTCAATGAAGTGACTTTATCAGCAATGGTCTTTTTCATGGCAGTTGCTATATTTGGTTTT
GTCTTCCAAGTCAGTGCTTTGATCACTGAAAAGGAACTCAAGCTTCGACAGGCAATGACT
ATGATGGGCCTTTTTGATACGGCCTATTGGTTGTCATGGATCACTTGGGAAGGACTCCTC
ATATTTTTCTCTTCTGCGCTTACTGTGATCTTTGGAATGATGTTTCAATTTGATTTTTTC
TTGCGCAATAACGTATTGGTTGTGTTCCTTCTGTTTTTCCTCTTCCAACTTACTATGGTT
GTCTTTGGATATTGGCTGTCTACTTTCCTTACCAAAGCAGCTTCAGCGACAAATGTGGCT
TTTGTCATCTTTATTGTTGGTTTCATTACTATGATTGGTTCACAGCTGGCTAATTATCCC
TACTCCGCAGCATATTCCAATGGCCATAGGGTTTATTGGTCATTGTTCCCACCAAATCTT
CTTACTATAGGTCTTCAGTTACTTACTAAAGCAACTGAAAGTCCTAAAGATCCAGGTATT
AGCTGGAGTACTAGGGCAAAGTGTTTACCTAAAGAACCAGACTGTGTAACTACCATGCAT
GATGTGTATATACTACTTGTGAAAACATTTTTTTTCTGGCTCGTCCTGGCTATATACTTC
GACAACATAATTCCAAATATATCTGGTGTGAGAAAATCAAAATTGTACTTCCTATATCCT
GGCTACTGGACTGGAAACGGTGGAAGTAGTGTGAAAGAGGGAGGAAACTGTAGCATCTGT
TCAGGCTCATTGCCACGGCTGGATCCTATTACACCAGATGACGAAGACGTTCTTACAGAA
GAAAACACTGTTAAAAAGCAAGCTATGGAAGGTGACAATTCCAATAATGCAGTTCAAATA
CGCGGTCTTATTAAGACATATCCTGGAAAGAAAACAGGTGGCTGCTGCTGCTGCTGTAGA
AAAAAAAGTCCTCCTTTCCATAGTGTCAAGGGCTTATGGTTGAACGTCGAAAAGGATCAG
CTACTTTGTATGCTTGGGCCCAATGGAGCTGGAAAAACTACTACTATAAGTTGTTTGACT
GGGATTAATCCTGTTACAGCAGGAGATGCATTGGTATATAATCAGTCCATTCGAAGCTCT
ATGGGCATGACAAACATTCGAAGGATGATGGGAGTTTGCCCCCAGTTTGATATTCTTTGG
GATGCATTATCCGGACAAGAGAACCTTCAGATTTTTGCCAACATTAAAGGTCTACCCCCT
GCTTCAGTAGACACGGTGGTAGCTCAACTATTATCCCAGTCAAAAATCACTAAGGTGTCA
GCCAAGATGAGATCTTGTAGTTACAGTGGAGGAATGAAACGACGTCTTAGTGTTGCTATA
GCCCTTATTGGAGATCCAAAGTTGGTTATTTTGGATGAACCGACTACTGGTATGGATCCA
ATTACTCGAAGGCACGTTTGGGACATTATCGAGAAAGCCAAAAAAGGACGTGCCATTATC
TTGACAACCCATTCAATGGAAGAAGCTGATGTCTTAAGTGACCGTATTAGTATCATGGCA
AAGGGAAGGCTTCGTTGCATTGGAACTTCCATAAGGTTGAAAGCAAAATTTGGTACTGGT
TTCATTGCTAATGTGGGCTTAGTTAGTGAGTCAACATCTCCTGAAGCTGTGAAACACTTC
TTCAAAAGTCACTTGGATGTGGTGCCTAAAGATGAAAATAAGTGCTTCCTTACCTATGTT
ATTCCTCATGAAAGGGAAAAGATGTTGACGGAATTCTTTGCTGAGCTTCAAGCTAGACAA
AGTGAGTTTGGTGTAAAAGACATCCAGCTAGGTCTTACAACTCTTGAAGAAGTGTTCATG
AACATAGCTAAACAGGCAGATGTGGAAACTGCAATAGCTGAAGGAAGATTTAAAACTCTT
ACATTGAACTCAGGGAACTCTGTTGAAGTACCTGTGGGAGCACAATTCATTGGACTTCCA
GGAACAAAATCTCCACAGAATCCCGGAGGTATTATGGTGGAAGTATATTGGGAGCCAGAT
GAAACAGGTAGTCCTTGCATATATGGCCTCTCAGAAGAAATGCCAATACCACCTCATATT
CAACTAAGAGATCCTCCAACAAACAACTCACCTACAAACCAAGGAATTGTAATTGACCCT
TCACAACTCAAAATGCACTTGTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400055847
PEP Infomation

pacid=37450458 transcript=PGSC0003DMT400083147 locus=PGSC0003DMG400033077 ID=PGSC0003DMT400083147.v4.03 annot-version=v4.03
Sequence

MELQGGIPLLMQQYKALFKKNVLLALRNKPATFLQLFSSFFFIFLLFCIKLSDESRNADN
SYAKELRDPKPLMAPPIPPCEDKFYIKTPCYDFIWSGKHSKTIGDVVKGIMANNPGRPIP
ANKVLAFNTAKDVDKWLFDNPVRCPAAVHFTIVKGNKISYGIQTNSTDVVKRGVTEDPTF
KFQIPLQIAAEREIARNLIGDPKFPWDVSFKEFPHPPGEIFNEVTLSAMVFFMAVAIFGF
VFQVSALITEKELKLRQAMTMMGLFDTAYWLSWITWEGLLIFFSSALTVIFGMMFQFDFF
LRNNVLVVFLLFFLFQLTMVVFGYWLSTFLTKAASATNVAFVIFIVGFITMIGSQLANYP
YSAAYSNGHRVYWSLFPPNLLTIGLQLLTKATESPKDPGISWSTRAKCLPKEPDCVTTMH
DVYILLVKTFFFWLVLAIYFDNIIPNISGVRKSKLYFLYPGYWTGNGGSSVKEGGNCSIC
SGSLPRLDPITPDDEDVLTEENTVKKQAMEGDNSNNAVQIRGLIKTYPGKKTGGCCCCCR
KKSPPFHSVKGLWLNVEKDQLLCMLGPNGAGKTTTISCLTGINPVTAGDALVYNQSIRSS
MGMTNIRRMMGVCPQFDILWDALSGQENLQIFANIKGLPPASVDTVVAQLLSQSKITKVS
AKMRSCSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIEKAKKGRAII
LTTHSMEEADVLSDRISIMAKGRLRCIGTSIRLKAKFGTGFIANVGLVSESTSPEAVKHF
FKSHLDVVPKDENKCFLTYVIPHEREKMLTEFFAELQARQSEFGVKDIQLGLTTLEEVFM
NIAKQADVETAIAEGRFKTLTLNSGNSVEVPVGAQFIGLPGTKSPQNPGGIMVEVYWEPD
ETGSPCIYGLSEEMPIPPHIQLRDPPTNNSPTNQGIVIDPSQLKMHLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400083147
Transcript Infomation

pacid=37450458 locus=PGSC0003DMG400033077 ID=PGSC0003DMT400083147.v4.03 annot-version=v4.03
Sequence

ATGGAATTGCAGGGGGGAATCCCTCTGCTAATGCAGCAATACAAAGCATTATTTAAGAAA
AATGTGTTGCTTGCATTGCGTAACAAGCCCGCAACATTCCTACAGCTCTTCTCGTCTTTC
TTCTTCATTTTCCTTCTATTCTGCATTAAATTATCTGATGAATCGCGCAATGCAGATAAC
AGCTATGCTAAAGAATTGCGCGATCCTAAACCTCTTATGGCGCCACCTATCCCACCTTGC
GAGGACAAGTTTTATATTAAGACTCCATGCTATGATTTCATTTGGAGTGGAAAACATAGT
AAAACTATAGGGGATGTTGTTAAGGGAATTATGGCAAATAATCCTGGTAGGCCTATTCCT
GCCAACAAGGTTCTAGCATTTAACACGGCAAAGGATGTGGATAAATGGCTTTTTGATAAT
CCTGTGCGTTGTCCTGCAGCTGTGCACTTTACAATAGTGAAGGGGAATAAAATTAGTTAT
GGTATTCAGACAAACTCCACGGATGTAGTGAAACGAGGAGTAACTGAAGATCCAACTTTT
AAGTTCCAAATCCCACTTCAAATAGCAGCAGAACGTGAAATCGCAAGAAATCTGATTGGA
GATCCAAAATTCCCCTGGGATGTCAGTTTTAAAGAATTTCCGCATCCTCCTGGTGAAATA
TTCAATGAAGTGACTTTATCAGCAATGGTCTTTTTCATGGCAGTTGCTATATTTGGTTTT
GTCTTCCAAGTCAGTGCTTTGATCACTGAAAAGGAACTCAAGCTTCGACAGGCAATGACT
ATGATGGGCCTTTTTGATACGGCCTATTGGTTGTCATGGATCACTTGGGAAGGACTCCTC
ATATTTTTCTCTTCTGCGCTTACTGTGATCTTTGGAATGATGTTTCAATTTGATTTTTTC
TTGCGCAATAACGTATTGGTTGTGTTCCTTCTGTTTTTCCTCTTCCAACTTACTATGGTT
GTCTTTGGATATTGGCTGTCTACTTTCCTTACCAAAGCAGCTTCAGCGACAAATGTGGCT
TTTGTCATCTTTATTGTTGGTTTCATTACTATGATTGGTTCACAGCTGGCTAATTATCCC
TACTCCGCAGCATATTCCAATGGCCATAGGGTTTATTGGTCATTGTTCCCACCAAATCTT
CTTACTATAGGTCTTCAGTTACTTACTAAAGCAACTGAAAGTCCTAAAGATCCAGGTATT
AGCTGGAGTACTAGGGCAAAGTGTTTACCTAAAGAACCAGACTGTGTAACTACCATGCAT
GATGTGTATATACTACTTGTGAAAACATTTTTTTTCTGGCTCGTCCTGGCTATATACTTC
GACAACATAATTCCAAATATATCTGGTGTGAGAAAATCAAAATTGTACTTCCTATATCCT
GGCTACTGGACTGGAAACGGTGGAAGTAGTGTGAAAGAGGGAGGAAACTGTAGCATCTGT
TCAGGCTCATTGCCACGGCTGGATCCTATTACACCAGATGACGAAGACGTTCTTACAGAA
GAAAACACTGTTAAAAAGCAAGCTATGGAAGGTGACAATTCCAATAATGCAGTTCAAATA
CGCGGTCTTATTAAGACATATCCTGGAAAGAAAACAGGTGGCTGCTGCTGCTGCTGTAGA
AAAAAAAGTCCTCCTTTCCATAGTGTCAAGGGCTTATGGTTGAACGTCGAAAAGGATCAG
CTACTTTGTATGCTTGGGCCCAATGGAGCTGGAAAAACTACTACTATAAGTTGTTTGACT
GGGATTAATCCTGTTACAGCAGGAGATGCATTGGTATATAATCAGTCCATTCGAAGCTCT
ATGGGCATGACAAACATTCGAAGGATGATGGGAGTTTGCCCCCAGTTTGATATTCTTTGG
GATGCATTATCCGGACAAGAGAACCTTCAGATTTTTGCCAACATTAAAGGTCTACCCCCT
GCTTCAGTAGACACGGTGGTAGCTCAACTATTATCCCAGTCAAAAATCACTAAGGTGTCA
GCCAAGATGAGATCTTGTAGTTACAGTGGAGGAATGAAACGACGTCTTAGTGTTGCTATA
GCCCTTATTGGAGATCCAAAGTTGGTTATTTTGGATGAACCGACTACTGGTATGGATCCA
ATTACTCGAAGGCACGTTTGGGACATTATCGAGAAAGCCAAAAAAGGACGTGCCATTATC
TTGACAACCCATTCAATGGAAGAAGCTGATGTCTTAAGTGACCGTATTAGTATCATGGCA
AAGGGAAGGCTTCGTTGCATTGGAACTTCCATAAGGTTGAAAGCAAAATTTGGTACTGGT
TTCATTGCTAATGTGGGCTTAGTTAGTGAGTCAACATCTCCTGAAGCTGTGAAACACTTC
TTCAAAAGTCACTTGGATGTGGTGCCTAAAGATGAAAATAAGTGCTTCCTTACCTATGTT
ATTCCTCATGAAAGGGAAAAGATGTTGACGGAATTCTTTGCTGAGCTTCAAGCTAGACAA
AGTGAGTTTGGTGTAAAAGACATCCAGCTAGGTCTTACAACTCTTGAAGAAGTGTTCATG
AACATAGCTAAACAGGCAGATGTGGAAACTGCAATAGCTGAAGGAAGATTTAAAACTCTT
ACATTGAACTCAGGGAACTCTGTTGAAGTACCTGTGGGAGCACAATTCATTGGACTTCCA
GGAACAAAATCTCCACAGAATCCCGGAGGTATTATGGTGGAAGTATATTGGGAGCCAGAT
GAAACAGGTAGTCCTTGCATATATGGCCTCTCAGAAGAAATGCCAATACCACCTCATATT
CAACTAAGAGATCCTCCAACAAACAACTCACCTACAAACCAAGGAATTGTAATTGACCCT
TCACAACTCAAAATGCACTTGTCATGA