Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083117
CDS Infomation

pacid=37454124 polypeptide=PGSC0003DMP400055827 locus=PGSC0003DMG400033060 ID=PGSC0003DMT400083117.v4.03 annot-version=v4.03
Sequence

ATGGCCTTTGCAGCTCAGCAGAAGAAGGCTATTCATTCCATGTTAGCAAACAAGCTGACC
CATCTCAAAATCCCTGACTCTTCTTCATCATCTCCTCCTTCTACTGATCCAGATTTTGAT
TTTTCTGATGTATTTGGTGCTCCTACCTCTTCTTCATCTCCTTCATCTTCTTCCAGTTTT
CTAACTGACCCACAAATCATTCATAGTAGGTCCCACTCTTTTGTGGGTCCATCTCCAAGG
ATCACTCTCTCAAAGCCTCTGCCTTTTCACCAAGAAGTTGATTCTGAGAGTGAAAGTGAT
AGTGATAAAGTTAATACTCATGTAGGTACTCACCAAACTGAATGTACTGATGGGGTTGAA
GAGATTAGTGGAGATGAGGGGTTAGCTGTAACAAAATTTGGGCCAGGGGATTTTGAGATC
TTGAGGATGATTGGAAAAGGTTCTTTTGGGAAGGTTTTTCAGGTGAAGATGAAGGGGTAT
GGTGGTGAGGGTGATGGGATATTAGCAATGAAAGTGATGAGGAAGGACACGGTAATCAAG
AATAAGCATGTGGATTATATGAGAGCTGAGAGGGATATTCTCACTAAAGTTGAGCACCCT
TTTATTGTTCAGCTTAGATACTCATTTCAGACGAAGTCTAAGCTGTATTTGATTTTGGAT
TTTATAAATGGAGGACATCTTTTCTATCATCTATACAGACAAGGGATTTTCAGTGAGGAC
CAGGCAAGGATTTATGCTGCTGAGATAGTTTCTGCTGTTTCACATCTTCACCAGAGAGGG
ATCGTGCATCGAGACCTCAAACCTGAAAATATTCTCATGGATGGTGATGGACATGTCATG
CTGACAGATTTTGGACTGGCAAAAGAGATTGATGAATCAAGCAGATCTAATTCAATGTGT
GGAACCATGGAATACATGGCTCCGGAGATTATACAGTCCAAGGGCCACAATAAAGATGCT
GACTGGTGGAGTGTTGGGGTACTTCTGTATGAGATGCTGACTGGTCAGCCACCTTTCACC
CATGCAAATAGAAAGAAGCTTCAGGAAAAGATCATCAGCGAGAAACTGAAACTTCTACCA
CGTCTGACTGGTGAAGCTCACTCTCTGCTCAAAGGATTGCTACAGAAGGACCCATCCAAA
AGATTAGGCAGTGGACCAAGAGGAGGGGATGAGATCAAAAGTCACAAGTGGTTCCGCACA
ATCAATTGGAAGAAACTTGATGCCAGAGAACTACAGCCTAAGTTCAAACCAGATGTAATT
GGCAGAGATTGCACTGCCAATTTCGACAAATGTTGGACTACAATGCCACCGGATGACTCA
CCAGCATCTACTCCGACAACAGGCGAACACTTTCAAGGTTACACTTATGTAGCACCAAAT
CCTTGGCTCTCCTCTAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055827
PEP Infomation

pacid=37454124 transcript=PGSC0003DMT400083117 locus=PGSC0003DMG400033060 ID=PGSC0003DMT400083117.v4.03 annot-version=v4.03
Sequence

MAFAAQQKKAIHSMLANKLTHLKIPDSSSSSPPSTDPDFDFSDVFGAPTSSSSPSSSSSF
LTDPQIIHSRSHSFVGPSPRITLSKPLPFHQEVDSESESDSDKVNTHVGTHQTECTDGVE
EISGDEGLAVTKFGPGDFEILRMIGKGSFGKVFQVKMKGYGGEGDGILAMKVMRKDTVIK
NKHVDYMRAERDILTKVEHPFIVQLRYSFQTKSKLYLILDFINGGHLFYHLYRQGIFSED
QARIYAAEIVSAVSHLHQRGIVHRDLKPENILMDGDGHVMLTDFGLAKEIDESSRSNSMC
GTMEYMAPEIIQSKGHNKDADWWSVGVLLYEMLTGQPPFTHANRKKLQEKIISEKLKLLP
RLTGEAHSLLKGLLQKDPSKRLGSGPRGGDEIKSHKWFRTINWKKLDARELQPKFKPDVI
GRDCTANFDKCWTTMPPDDSPASTPTTGEHFQGYTYVAPNPWLSSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400083117
Transcript Infomation

pacid=37454124 locus=PGSC0003DMG400033060 ID=PGSC0003DMT400083117.v4.03 annot-version=v4.03
Sequence

ATGGCCTTTGCAGCTCAGCAGAAGAAGGCTATTCATTCCATGTTAGCAAACAAGCTGACC
CATCTCAAAATCCCTGACTCTTCTTCATCATCTCCTCCTTCTACTGATCCAGATTTTGAT
TTTTCTGATGTATTTGGTGCTCCTACCTCTTCTTCATCTCCTTCATCTTCTTCCAGTTTT
CTAACTGACCCACAAATCATTCATAGTAGGTCCCACTCTTTTGTGGGTCCATCTCCAAGG
ATCACTCTCTCAAAGCCTCTGCCTTTTCACCAAGAAGTTGATTCTGAGAGTGAAAGTGAT
AGTGATAAAGTTAATACTCATGTAGGTACTCACCAAACTGAATGTACTGATGGGGTTGAA
GAGATTAGTGGAGATGAGGGGTTAGCTGTAACAAAATTTGGGCCAGGGGATTTTGAGATC
TTGAGGATGATTGGAAAAGGTTCTTTTGGGAAGGTTTTTCAGGTGAAGATGAAGGGGTAT
GGTGGTGAGGGTGATGGGATATTAGCAATGAAAGTGATGAGGAAGGACACGGTAATCAAG
AATAAGCATGTGGATTATATGAGAGCTGAGAGGGATATTCTCACTAAAGTTGAGCACCCT
TTTATTGTTCAGCTTAGATACTCATTTCAGACGAAGTCTAAGCTGTATTTGATTTTGGAT
TTTATAAATGGAGGACATCTTTTCTATCATCTATACAGACAAGGGATTTTCAGTGAGGAC
CAGGCAAGGATTTATGCTGCTGAGATAGTTTCTGCTGTTTCACATCTTCACCAGAGAGGG
ATCGTGCATCGAGACCTCAAACCTGAAAATATTCTCATGGATGGTGATGGACATGTCATG
CTGACAGATTTTGGACTGGCAAAAGAGATTGATGAATCAAGCAGATCTAATTCAATGTGT
GGAACCATGGAATACATGGCTCCGGAGATTATACAGTCCAAGGGCCACAATAAAGATGCT
GACTGGTGGAGTGTTGGGGTACTTCTGTATGAGATGCTGACTGGTCAGCCACCTTTCACC
CATGCAAATAGAAAGAAGCTTCAGGAAAAGATCATCAGCGAGAAACTGAAACTTCTACCA
CGTCTGACTGGTGAAGCTCACTCTCTGCTCAAAGGATTGCTACAGAAGGACCCATCCAAA
AGATTAGGCAGTGGACCAAGAGGAGGGGATGAGATCAAAAGTCACAAGTGGTTCCGCACA
ATCAATTGGAAGAAACTTGATGCCAGAGAACTACAGCCTAAGTTCAAACCAGATGTAATT
GGCAGAGATTGCACTGCCAATTTCGACAAATGTTGGACTACAATGCCACCGGATGACTCA
CCAGCATCTACTCCGACAACAGGCGAACACTTTCAAGGTTACACTTATGTAGCACCAAAT
CCTTGGCTCTCCTCTAGTTGA