Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083092
CDS Infomation

pacid=37454553 polypeptide=PGSC0003DMP400055810 locus=PGSC0003DMG400033052 ID=PGSC0003DMT400083092.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGGAATACCTAAAAACCTGGAGAAAATCGAGCCTATAGTAAATCACGTGAGA
AGGAATTCAACTGGAAGTGTAGGCTTTGAAATGGGAGGATACAAGGTCTTGTCACGTTAT
CTTGACGTTCCAAGAAGTTCATGCCATGATATGTGCAAACATGGTTATGAACATGATTCT
CCAACAAAGGCAAAGATTCCCCGGCCCTCAAGAGCAACATTAGGGAAAATCCCAGAAAGG
AAGAAAGTACCAGGCTCAACTAAACTACCTTCAGAGATCAAGAGCCAGACAACTTGCCAA
GTCAACGGACAGGAAATGCAATCGTCCACCAAAAGAATAGCGCCTTCTGTAAATCAACAA
AGTGACTCCAAGCTCAAGCCTTTGGAAGAAAATGCATCAAGAAGGCATCAAAGAAGATAC
AGTGATAACTTTATACCTGGGAGTTCTTCGAAAGTTCAAGAGTCTCTATCGAATGGATCT
AGCAGTAGACAAAACCACAGCTGTAAAATGGAGAACGACGGTGGGTCCTCAGAGCTAAGA
AAGAAAAAGAGTGTTGTTACCTCAACTGTTTCATTGTCTCCAAAATCTTCTGTGAAAAAA
GTATCGAGCACAGCATCCAGTAACAACTCTCCCAGAAAGGCATCTCAACTTAACAGTAGG
ACTAGTCTTGCACCAAGCAAGACTGGGAAAATCAGTCATGAAAATGTGACAAAGAAGACG
TCGCATCTTAGAGAATCAAAGACTAAAAGCAACACTACAGGTATTTCCCAGGAAAATAGT
AAGGCCAAAGAATCCTCTTTGCATAGAGATGGTCCAAAACGAGGAAAGACAGCTTCATCA
TCCCTTTGTTCCCCATCATTTTCACCATCTTCAGGTGGTAGTAACTCAAGAAATATTGAC
ACCACTACCCAGTCGTCCGTTTCCTCGTCTTCATTGATGTCACCATTATCAAACTCAGCA
AATGAGTCTGCTCACTGTGATGAAACAAGCTCTAGCACCAGTCAAAATGGAACTACAACT
CAGAAGCAAGGCACAAAACCTCAGAAAGCTGGACAAGTTGGCTTAGAAAATGAAGATTGC
AGTCCTAAACTGCTCAAGTTCAAAAAAGGGAAGACAATTGATATCCAATCTGAGAATGAC
AGTCCGCGGAAACAAAAGTTGAGGCAAGTCACCATAAAAGATAAGGGCGAAAATGAAAAT
GGTAATCCAATAGGAAAAGGCTTGAGAAAATCCACTGCTGATGGCCATTCATATGCTGCG
AAAGACGAAGTTGTGACAGTAAATCTTCGATCCAATGGTATAGAGGATTCAAAAGAAACT
CCAAGTTTGTTCAACAACGTGATTGAAGTTACTGCAAGCAAGCTTGCCAAGACTAGGAGA
AGCAAGGTCAAGGCTCTGGTGGGTGCTTTTGAAACTATAATCTCCCTTCAGGATCAAAAA
TCCTCTCCAGTAATTGGAAGATCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400055810
PEP Infomation

pacid=37454553 transcript=PGSC0003DMT400083092 locus=PGSC0003DMG400033052 ID=PGSC0003DMT400083092.v4.03 annot-version=v4.03
Sequence

MADGIPKNLEKIEPIVNHVRRNSTGSVGFEMGGYKVLSRYLDVPRSSCHDMCKHGYEHDS
PTKAKIPRPSRATLGKIPERKKVPGSTKLPSEIKSQTTCQVNGQEMQSSTKRIAPSVNQQ
SDSKLKPLEENASRRHQRRYSDNFIPGSSSKVQESLSNGSSSRQNHSCKMENDGGSSELR
KKKSVVTSTVSLSPKSSVKKVSSTASSNNSPRKASQLNSRTSLAPSKTGKISHENVTKKT
SHLRESKTKSNTTGISQENSKAKESSLHRDGPKRGKTASSSLCSPSFSPSSGGSNSRNID
TTTQSSVSSSSLMSPLSNSANESAHCDETSSSTSQNGTTTQKQGTKPQKAGQVGLENEDC
SPKLLKFKKGKTIDIQSENDSPRKQKLRQVTIKDKGENENGNPIGKGLRKSTADGHSYAA
KDEVVTVNLRSNGIEDSKETPSLFNNVIEVTASKLAKTRRSKVKALVGAFETIISLQDQK
SSPVIGRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400083092
Transcript Infomation

pacid=37454553 locus=PGSC0003DMG400033052 ID=PGSC0003DMT400083092.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGGAATACCTAAAAACCTGGAGAAAATCGAGCCTATAGTAAATCACGTGAGA
AGGAATTCAACTGGAAGTGTAGGCTTTGAAATGGGAGGATACAAGGTCTTGTCACGTTAT
CTTGACGTTCCAAGAAGTTCATGCCATGATATGTGCAAACATGGTTATGAACATGATTCT
CCAACAAAGGCAAAGATTCCCCGGCCCTCAAGAGCAACATTAGGGAAAATCCCAGAAAGG
AAGAAAGTACCAGGCTCAACTAAACTACCTTCAGAGATCAAGAGCCAGACAACTTGCCAA
GTCAACGGACAGGAAATGCAATCGTCCACCAAAAGAATAGCGCCTTCTGTAAATCAACAA
AGTGACTCCAAGCTCAAGCCTTTGGAAGAAAATGCATCAAGAAGGCATCAAAGAAGATAC
AGTGATAACTTTATACCTGGGAGTTCTTCGAAAGTTCAAGAGTCTCTATCGAATGGATCT
AGCAGTAGACAAAACCACAGCTGTAAAATGGAGAACGACGGTGGGTCCTCAGAGCTAAGA
AAGAAAAAGAGTGTTGTTACCTCAACTGTTTCATTGTCTCCAAAATCTTCTGTGAAAAAA
GTATCGAGCACAGCATCCAGTAACAACTCTCCCAGAAAGGCATCTCAACTTAACAGTAGG
ACTAGTCTTGCACCAAGCAAGACTGGGAAAATCAGTCATGAAAATGTGACAAAGAAGACG
TCGCATCTTAGAGAATCAAAGACTAAAAGCAACACTACAGGTATTTCCCAGGAAAATAGT
AAGGCCAAAGAATCCTCTTTGCATAGAGATGGTCCAAAACGAGGAAAGACAGCTTCATCA
TCCCTTTGTTCCCCATCATTTTCACCATCTTCAGGTGGTAGTAACTCAAGAAATATTGAC
ACCACTACCCAGTCGTCCGTTTCCTCGTCTTCATTGATGTCACCATTATCAAACTCAGCA
AATGAGTCTGCTCACTGTGATGAAACAAGCTCTAGCACCAGTCAAAATGGAACTACAACT
CAGAAGCAAGGCACAAAACCTCAGAAAGCTGGACAAGTTGGCTTAGAAAATGAAGATTGC
AGTCCTAAACTGCTCAAGTTCAAAAAAGGGAAGACAATTGATATCCAATCTGAGAATGAC
AGTCCGCGGAAACAAAAGTTGAGGCAAGTCACCATAAAAGATAAGGGCGAAAATGAAAAT
GGTAATCCAATAGGAAAAGGCTTGAGAAAATCCACTGCTGATGGCCATTCATATGCTGCG
AAAGACGAAGTTGTGACAGTAAATCTTCGATCCAATGGTATAGAGGATTCAAAAGAAACT
CCAAGTTTGTTCAACAACGTGATTGAAGTTACTGCAAGCAAGCTTGCCAAGACTAGGAGA
AGCAAGGTCAAGGCTCTGGTGGGTGCTTTTGAAACTATAATCTCCCTTCAGGATCAAAAA
TCCTCTCCAGTAATTGGAAGATCATAA