Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083091
CDS Infomation

pacid=37450437 polypeptide=PGSC0003DMP400055809 locus=PGSC0003DMG400033051 ID=PGSC0003DMT400083091.v4.03 annot-version=v4.03
Sequence

ATGCAGTACACTAATTATCGTCCAGGATATTACTACCCAAGAGATAATGTTGTCAACCTT
ACGGGTAATTCACAGTCAATACCCCACAGTGATATCGCCTGCAACAGTAGTAGAGGCTTA
CATCTTGCATTTCCTCCGTTTATGGTAGACGAGAGCCAGGATGTAGTTTATCAGAAAGAA
ATATTGAGACAGACAATACTCAAACACGATGCAACATTTAGATATCAGGTCAATGAGCTG
CATCGCTTATATGGAAGACAAAGGGAATTAATGGATGAGATGACAAAGAGAGAACTAGGA
GAAGATCATATACACTTGCAAGCATCAAAGGCAAATACTTTTGTGTCTCTGTTTAGGTCT
GACATTTCTGAGAAAACCTTTAGGCACTCAGTAAATCTCACGAGCATTGAACCATATGCA
CCAAGCAAAGAAATGTTTCAAGATCCCTTTAGTTCTGGTGCTGATAAAACTGTGCAACCA
GGAGGTGACTGTCTTTCAGGTCAAAACATTTTAAACGAATGCAAGCCATCATCAATGAAG
GACGACACGTCAAGGAAGAGAATGTTGGACCTTGAACTTCCAGCAGAAAAAGCCATTAAT
AATGAATACAGGGAGCAATTTGAGGAAGAAAATCCTGCGGCTAAAAAGACAAATATTTTG
ATCTCAGAACTTCAACCTCAATGTTCTTCGAAAGTCAACCTTGTTGCCTCTGGAAACTCT
TCCAATTCTCCCTCAAGTTGTAGGGGTACCTTTCTTTTGTTTGACCTGAATGAACCTGTA
CAGCCTTTTGAGTCAGAGTGTCCAAATTCGGCATTTGAATCGAATAACATTCACGAGGAA
ATTAGGGTCGGAGATCTGGATTTATCCGGTATGGCACGTGCAGAATGCTCAACTCTGAAT
AAAGAAGGGAGAGATGAAAGCAACTTGAAGTCGTTTGATGAAGTTTCTTCTGTTGGGAGA
GCACTTCTTCCATGTAATCAACCAGCATCGTTGCCCTTAGAAAATGTAGACAAGATTCAT
GCTGAAACCACAACTGACAAATCACTGGTGATTTCCTCTTGGAGAGAATTTAAGCAGATT
CCTGTTGCAGTACAAGCACTTTCATGCTTTAATACTGATGCATCATTCAGCAAGAGTACT
GAGTCCTCTGTTAGGAATTCTAGTCTCACTGCAAAGAAGTTAAATATGGACCTAGGTCCT
GCGTCCACTCCAACTTCTGGAAGTTTGACTTCTTGCTTTATGCAGCATGATGCAAGTGAT
AGTACAGGTGAACACATTGCTGCTGTAAAAGACAACAAGTTTTCAGACTACACAAGTTCT
GGGAACGGCATGGACTTGAATTTGACACCTTCTACCTGTTTGTCTGACTGCCAGTCTGCA
CCCTCCTTCGACATTTCCCATCTTAATTTCCCTGAAGGCAGAAATGTAGAGATACATAAA
AATTCTGAGGTTCCTGACAGTAACATGGTTCCTAATTCAACAGCTGAATATAGAAAATGC
ACCAGGGATAATCACCTTGTTGGTTCTAGAATTGATAGCAAGCTTTCAACAGCTAATATT
TGCATCAACTTAAACTCTTGCATCAAAGAAGATCTAAAAGGTCCAAGTGAAGCAACAAAG
TCTACTGCAGAAAGAGATCTAAAAGGTCCTGTTAGCCCAGAAAATAAGGAGTGCTCTCCA
CCTAGAGGAGATTCTGAGGACATTAATATCAGAACATCAATCCATTTGCCAAGAAGAGGC
CATGATGATCCAATCGAGGAACCTGACACGGTTGCAGCTGATATACTTATTTTTATTTCA
TCATCTGTGGTCCACAGGTACTCAAAGAATGCCATTGGTGAACCATCTGAAACTTCCAGC
AACTGTCTACGTGGGCTTGCTGAAGTTGCTACTTCTTTGGCAAGTAGTCAAGAGAATGAA
GTTGAACAATCCATGGAAGTCCATTTCGGGCGCGATGTACTTCTTTCAGAAAGGACTGCT
TCAAGTCGGATGAAGCTTAATCTGAGAAAGGGGCACATGGATAATAGTCTTAGTTACTTG
AAGGTTGCAAAAAAGAAGGAAAAAGGCATTGTGTCTAATCAGCCAAGGAGGGGTCAAGCA
TGGAGGACAAAGGATCAGAAGGACCTTCAAGCAGATGTCTTACCTGCAGTGGAATCTCTT
TTGCATCAAGTAAATGAAACAAGTGTTGCTTCAAAACCCAGTCCATGGAAAAAAACTCCG
AGTAGGACGAGTTGCAGAGGTAGGAGACGGTCCAATGATGGAGAGAGAACAATGTGCTCA
CTCCTACTGCAGCATACTTTGGATAACAAACATGGGATCACAGACAGATTTTTGAAAGGC
TGGGGGGTGACAAAAAAGCGGCAAAGGACTCGGAGAGCTAAGTCTTATGTGTCTCCTCTT
TTCTTAGCTGCTGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055809
PEP Infomation

pacid=37450437 transcript=PGSC0003DMT400083091 locus=PGSC0003DMG400033051 ID=PGSC0003DMT400083091.v4.03 annot-version=v4.03
Sequence

MQYTNYRPGYYYPRDNVVNLTGNSQSIPHSDIACNSSRGLHLAFPPFMVDESQDVVYQKE
ILRQTILKHDATFRYQVNELHRLYGRQRELMDEMTKRELGEDHIHLQASKANTFVSLFRS
DISEKTFRHSVNLTSIEPYAPSKEMFQDPFSSGADKTVQPGGDCLSGQNILNECKPSSMK
DDTSRKRMLDLELPAEKAINNEYREQFEEENPAAKKTNILISELQPQCSSKVNLVASGNS
SNSPSSCRGTFLLFDLNEPVQPFESECPNSAFESNNIHEEIRVGDLDLSGMARAECSTLN
KEGRDESNLKSFDEVSSVGRALLPCNQPASLPLENVDKIHAETTTDKSLVISSWREFKQI
PVAVQALSCFNTDASFSKSTESSVRNSSLTAKKLNMDLGPASTPTSGSLTSCFMQHDASD
STGEHIAAVKDNKFSDYTSSGNGMDLNLTPSTCLSDCQSAPSFDISHLNFPEGRNVEIHK
NSEVPDSNMVPNSTAEYRKCTRDNHLVGSRIDSKLSTANICINLNSCIKEDLKGPSEATK
STAERDLKGPVSPENKECSPPRGDSEDINIRTSIHLPRRGHDDPIEEPDTVAADILIFIS
SSVVHRYSKNAIGEPSETSSNCLRGLAEVATSLASSQENEVEQSMEVHFGRDVLLSERTA
SSRMKLNLRKGHMDNSLSYLKVAKKKEKGIVSNQPRRGQAWRTKDQKDLQADVLPAVESL
LHQVNETSVASKPSPWKKTPSRTSCRGRRRSNDGERTMCSLLLQHTLDNKHGITDRFLKG
WGVTKKRQRTRRAKSYVSPLFLAAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400083091
Transcript Infomation

pacid=37450437 locus=PGSC0003DMG400033051 ID=PGSC0003DMT400083091.v4.03 annot-version=v4.03
Sequence

ATGCAGTACACTAATTATCGTCCAGGATATTACTACCCAAGAGATAATGTTGTCAACCTT
ACGGGTAATTCACAGTCAATACCCCACAGTGATATCGCCTGCAACAGTAGTAGAGGCTTA
CATCTTGCATTTCCTCCGTTTATGGTAGACGAGAGCCAGGATGTAGTTTATCAGAAAGAA
ATATTGAGACAGACAATACTCAAACACGATGCAACATTTAGATATCAGGTCAATGAGCTG
CATCGCTTATATGGAAGACAAAGGGAATTAATGGATGAGATGACAAAGAGAGAACTAGGA
GAAGATCATATACACTTGCAAGCATCAAAGGCAAATACTTTTGTGTCTCTGTTTAGGTCT
GACATTTCTGAGAAAACCTTTAGGCACTCAGTAAATCTCACGAGCATTGAACCATATGCA
CCAAGCAAAGAAATGTTTCAAGATCCCTTTAGTTCTGGTGCTGATAAAACTGTGCAACCA
GGAGGTGACTGTCTTTCAGGTCAAAACATTTTAAACGAATGCAAGCCATCATCAATGAAG
GACGACACGTCAAGGAAGAGAATGTTGGACCTTGAACTTCCAGCAGAAAAAGCCATTAAT
AATGAATACAGGGAGCAATTTGAGGAAGAAAATCCTGCGGCTAAAAAGACAAATATTTTG
ATCTCAGAACTTCAACCTCAATGTTCTTCGAAAGTCAACCTTGTTGCCTCTGGAAACTCT
TCCAATTCTCCCTCAAGTTGTAGGGGTACCTTTCTTTTGTTTGACCTGAATGAACCTGTA
CAGCCTTTTGAGTCAGAGTGTCCAAATTCGGCATTTGAATCGAATAACATTCACGAGGAA
ATTAGGGTCGGAGATCTGGATTTATCCGGTATGGCACGTGCAGAATGCTCAACTCTGAAT
AAAGAAGGGAGAGATGAAAGCAACTTGAAGTCGTTTGATGAAGTTTCTTCTGTTGGGAGA
GCACTTCTTCCATGTAATCAACCAGCATCGTTGCCCTTAGAAAATGTAGACAAGATTCAT
GCTGAAACCACAACTGACAAATCACTGGTGATTTCCTCTTGGAGAGAATTTAAGCAGATT
CCTGTTGCAGTACAAGCACTTTCATGCTTTAATACTGATGCATCATTCAGCAAGAGTACT
GAGTCCTCTGTTAGGAATTCTAGTCTCACTGCAAAGAAGTTAAATATGGACCTAGGTCCT
GCGTCCACTCCAACTTCTGGAAGTTTGACTTCTTGCTTTATGCAGCATGATGCAAGTGAT
AGTACAGGTGAACACATTGCTGCTGTAAAAGACAACAAGTTTTCAGACTACACAAGTTCT
GGGAACGGCATGGACTTGAATTTGACACCTTCTACCTGTTTGTCTGACTGCCAGTCTGCA
CCCTCCTTCGACATTTCCCATCTTAATTTCCCTGAAGGCAGAAATGTAGAGATACATAAA
AATTCTGAGGTTCCTGACAGTAACATGGTTCCTAATTCAACAGCTGAATATAGAAAATGC
ACCAGGGATAATCACCTTGTTGGTTCTAGAATTGATAGCAAGCTTTCAACAGCTAATATT
TGCATCAACTTAAACTCTTGCATCAAAGAAGATCTAAAAGGTCCAAGTGAAGCAACAAAG
TCTACTGCAGAAAGAGATCTAAAAGGTCCTGTTAGCCCAGAAAATAAGGAGTGCTCTCCA
CCTAGAGGAGATTCTGAGGACATTAATATCAGAACATCAATCCATTTGCCAAGAAGAGGC
CATGATGATCCAATCGAGGAACCTGACACGGTTGCAGCTGATATACTTATTTTTATTTCA
TCATCTGTGGTCCACAGGTACTCAAAGAATGCCATTGGTGAACCATCTGAAACTTCCAGC
AACTGTCTACGTGGGCTTGCTGAAGTTGCTACTTCTTTGGCAAGTAGTCAAGAGAATGAA
GTTGAACAATCCATGGAAGTCCATTTCGGGCGCGATGTACTTCTTTCAGAAAGGACTGCT
TCAAGTCGGATGAAGCTTAATCTGAGAAAGGGGCACATGGATAATAGTCTTAGTTACTTG
AAGGTTGCAAAAAAGAAGGAAAAAGGCATTGTGTCTAATCAGCCAAGGAGGGGTCAAGCA
TGGAGGACAAAGGATCAGAAGGACCTTCAAGCAGATGTCTTACCTGCAGTGGAATCTCTT
TTGCATCAAGTAAATGAAACAAGTGTTGCTTCAAAACCCAGTCCATGGAAAAAAACTCCG
AGTAGGACGAGTTGCAGAGGTAGGAGACGGTCCAATGATGGAGAGAGAACAATGTGCTCA
CTCCTACTGCAGCATACTTTGGATAACAAACATGGGATCACAGACAGATTTTTGAAAGGC
TGGGGGGTGACAAAAAAGCGGCAAAGGACTCGGAGAGCTAAGTCTTATGTGTCTCCTCTT
TTCTTAGCTGCTGAGTAA