Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083086
CDS Infomation

pacid=37453942 polypeptide=PGSC0003DMP400055804 locus=PGSC0003DMG400033048 ID=PGSC0003DMT400083086.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGAATGAGACTGTGAGGACAGGGGATGGGTTTATTGACAGGAGTAAAGTTAGG
ATTTTGCTGTGTGATAACGATGCCAAAAGCTCGGAGGAAGTTTTTACGCTCTTGTGCAAA
TGTTCTTATCAAGTGATATCAGTGAGGTCACCCAGACAGGTGATTGATGCATTGAATGCA
GAAGGACCTCATATTGATCTCATCCTTTCAGAAGTTGACCTTCCTATGTCTAAAGGATTT
AAGATGTTGAAGTACATTATGAGGGATAAGCAGTTGCGACGCATTCCAGTGATCATGATG
TCATCACAAGATGAAGTCTCTATTGTTATCAAGTGCCTGAAATTTGGAGCAGCTGACTAC
CTGGTAAAGCCTCTCAGAACTAATGAGCTATTGAACTTGTGGACGCACATGTGGAGAAGA
AGGAGAATGCTCGGACTATCAGAGAAGAACATCTTAAGTTATGACTTCAATTTGGTCGTA
TCAGAGCCCAGTGATCATAATACAAATAGCACTACTCTTTTATCGGATGACACCGATGAT
AAGTCAAGGAAGTGTATTAATCCAGAAATGTGTCCCTCTACTATGCTGCAAGAAGAAGCA
AGATATAAGTCTATTCCTTCAACTGATGCTGCTCCCGTAGAGACTGCGGTTGTAGTTCCA
TTTGAGCATCAGCCTGATGCACCAGGAACTGATGATCAAAGGACAGGAGAAATTTCACTA
TTTCCTAAGAAGAGTGAATTGAAGATAGGTGAGTCTTCTGCCTTCTTTACATATGTCAAG
TCAAGCTTGCCGAAAAGCAATGGCCAAAGCCCAACCTCTATCCATGGAAGTGTGCCTCAG
CAATTGGGGATTGAAGAAAAGACTTCATTGGGAGGACATGAACACATTGATACTAACATA
CAAGTCACTGGAGATGTAGAAAGTCACTTGCAAGGTGATGGCTATCCAAAAAGCAACAAT
ATTCCAAAGTCTTTATCTATTGAGAGGTCATGTACTCCCCCTTTATCACAGGAATTTCCA
CATCACAGGATCTCAAAAATGGAGGAATTCTCTCAGGTGCATATGCATCTCAAAAATGAG
GCTCAGCATGGTGTTTCCAGTTTTCATGCACAAACTCCTTATCCCTATTATATTTCAGGA
GTAATGAATCAAGTCATGATGCCGTCAACTCAAATTTATCACGAGAGCCTGCAACATCTC
CATAATCATGCTAATTCAGCTATGTTGCCTCAATACAACTATATGCCGCGATATCCTCAT
ATGCATGGAATATCATCATATCCTTTCTACCCGATCGGCATGTGCTTTCAACCAGGTCAA
TTGCCAGAAGCACATCCGTGGCATTCATTTGGCAGTTCATCTTCTGCTGAAATCAAGGTG
AGCAAAGTTGATCTAAGAGAGACAGCTTTGATGAAGTTTAGACAGAAGAGAAAGGAAAGA
TGTTTTGACAAGAAGATTAGGTATATTAACCGGAAGCAACTGGCAGAGCAGAGACCACGT
TTGAGGGGACAGTTTGTAAGGAAGGCCAATGGTGTGAATGTAGATGTCAATGGGCAACCT
TCTTCAGCAGGCAATGACGATGTTGAAGAAGAGGAAGAGGAGGAAGTACAAATAGAATAT
TTGGATTCTTCACACGAGGATGATCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055804
PEP Infomation

pacid=37453942 transcript=PGSC0003DMT400083086 locus=PGSC0003DMG400033048 ID=PGSC0003DMT400083086.v4.03 annot-version=v4.03
Sequence

MEKNETVRTGDGFIDRSKVRILLCDNDAKSSEEVFTLLCKCSYQVISVRSPRQVIDALNA
EGPHIDLILSEVDLPMSKGFKMLKYIMRDKQLRRIPVIMMSSQDEVSIVIKCLKFGAADY
LVKPLRTNELLNLWTHMWRRRRMLGLSEKNILSYDFNLVVSEPSDHNTNSTTLLSDDTDD
KSRKCINPEMCPSTMLQEEARYKSIPSTDAAPVETAVVVPFEHQPDAPGTDDQRTGEISL
FPKKSELKIGESSAFFTYVKSSLPKSNGQSPTSIHGSVPQQLGIEEKTSLGGHEHIDTNI
QVTGDVESHLQGDGYPKSNNIPKSLSIERSCTPPLSQEFPHHRISKMEEFSQVHMHLKNE
AQHGVSSFHAQTPYPYYISGVMNQVMMPSTQIYHESLQHLHNHANSAMLPQYNYMPRYPH
MHGISSYPFYPIGMCFQPGQLPEAHPWHSFGSSSSAEIKVSKVDLRETALMKFRQKRKER
CFDKKIRYINRKQLAEQRPRLRGQFVRKANGVNVDVNGQPSSAGNDDVEEEEEEEVQIEY
LDSSHEDDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400083086
Transcript Infomation

pacid=37453942 locus=PGSC0003DMG400033048 ID=PGSC0003DMT400083086.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGAATGAGACTGTGAGGACAGGGGATGGGTTTATTGACAGGAGTAAAGTTAGG
ATTTTGCTGTGTGATAACGATGCCAAAAGCTCGGAGGAAGTTTTTACGCTCTTGTGCAAA
TGTTCTTATCAAGTGATATCAGTGAGGTCACCCAGACAGGTGATTGATGCATTGAATGCA
GAAGGACCTCATATTGATCTCATCCTTTCAGAAGTTGACCTTCCTATGTCTAAAGGATTT
AAGATGTTGAAGTACATTATGAGGGATAAGCAGTTGCGACGCATTCCAGTGATCATGATG
TCATCACAAGATGAAGTCTCTATTGTTATCAAGTGCCTGAAATTTGGAGCAGCTGACTAC
CTGGTAAAGCCTCTCAGAACTAATGAGCTATTGAACTTGTGGACGCACATGTGGAGAAGA
AGGAGAATGCTCGGACTATCAGAGAAGAACATCTTAAGTTATGACTTCAATTTGGTCGTA
TCAGAGCCCAGTGATCATAATACAAATAGCACTACTCTTTTATCGGATGACACCGATGAT
AAGTCAAGGAAGTGTATTAATCCAGAAATGTGTCCCTCTACTATGCTGCAAGAAGAAGCA
AGATATAAGTCTATTCCTTCAACTGATGCTGCTCCCGTAGAGACTGCGGTTGTAGTTCCA
TTTGAGCATCAGCCTGATGCACCAGGAACTGATGATCAAAGGACAGGAGAAATTTCACTA
TTTCCTAAGAAGAGTGAATTGAAGATAGGTGAGTCTTCTGCCTTCTTTACATATGTCAAG
TCAAGCTTGCCGAAAAGCAATGGCCAAAGCCCAACCTCTATCCATGGAAGTGTGCCTCAG
CAATTGGGGATTGAAGAAAAGACTTCATTGGGAGGACATGAACACATTGATACTAACATA
CAAGTCACTGGAGATGTAGAAAGTCACTTGCAAGGTGATGGCTATCCAAAAAGCAACAAT
ATTCCAAAGTCTTTATCTATTGAGAGGTCATGTACTCCCCCTTTATCACAGGAATTTCCA
CATCACAGGATCTCAAAAATGGAGGAATTCTCTCAGGTGCATATGCATCTCAAAAATGAG
GCTCAGCATGGTGTTTCCAGTTTTCATGCACAAACTCCTTATCCCTATTATATTTCAGGA
GTAATGAATCAAGTCATGATGCCGTCAACTCAAATTTATCACGAGAGCCTGCAACATCTC
CATAATCATGCTAATTCAGCTATGTTGCCTCAATACAACTATATGCCGCGATATCCTCAT
ATGCATGGAATATCATCATATCCTTTCTACCCGATCGGCATGTGCTTTCAACCAGGTCAA
TTGCCAGAAGCACATCCGTGGCATTCATTTGGCAGTTCATCTTCTGCTGAAATCAAGGTG
AGCAAAGTTGATCTAAGAGAGACAGCTTTGATGAAGTTTAGACAGAAGAGAAAGGAAAGA
TGTTTTGACAAGAAGATTAGGTATATTAACCGGAAGCAACTGGCAGAGCAGAGACCACGT
TTGAGGGGACAGTTTGTAAGGAAGGCCAATGGTGTGAATGTAGATGTCAATGGGCAACCT
TCTTCAGCAGGCAATGACGATGTTGAAGAAGAGGAAGAGGAGGAAGTACAAATAGAATAT
TTGGATTCTTCACACGAGGATGATCTGTGA