Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083080
CDS Infomation

pacid=37451265 polypeptide=PGSC0003DMP400055798 locus=PGSC0003DMG400033046 ID=PGSC0003DMT400083080.v4.03 annot-version=v4.03
Sequence

ATGACTTGTGATTCAGAGATCAAGCTGTTTGGCAAGATACTTCCAGTGGTCGTCTCCGGC
GCCGGTAGGGGTTTGTCTGGTAGTGATGGTGTTAGATATGAGGGAAATAGAAATAGGTCT
GATCTTGATCGATGTTTAGAGGGAAGTAAAGCAAGCAGTGTAGAGAAAGATGAAGGAATT
GAGTATGAAAAGCAAGAAGCTGAAAAGGATGATATATCTGGAGAGCTCAGTGAAGCTAAA
TCTGAGGAGGGAGATCAAAATCAGATGATGGAGGAATCAGAAAATACTAAGACTCCATCA
GAATCAGAGAGCAGTCCTAAATCTTCAACTGAGGAAGACCCTCAAGCAGTAAAATCATCC
GAGACTGGGAATGAACCAACTAATGTGTCAAATTCTGAGCAGAACAATCTGAAGAAGCCA
GACAAAATCCTCCCATGCCCTCGTTGCAATAGTTCGGATACAAAATTCTGTTACTATAAT
AACAACAATGTCAACCAGCCTCGTCATTTCTGCAGGAGCTGCCAGAGGTATTGGACTGCC
GGTGGAACCATGAGGAATCTCCCTGTGGGAGCTGGTCGTCGCAAGAACAAGAATCTTGCA
TCTCAATATCGTCATATAAGTATCCCTGAAGGATTATTAGCAGCAGGAATTGAATCTCCA
AATGGATTAATTCATCATCCAATATTCAAACCAAATGGCACTATTCTATCCTTTGGTCCC
GACATACCCCTGTGTGAACCTATGGCTTCTGCATTAAATCAAGCAGAGAAAAGGGTATCG
AATGGTATCCAAAATGGTTCTCACAAATCAGAAGTCAACAATTCTTCTTGCAAAGGGGGA
GATACTGGGGATGAGTGCTATAGGGGGTCTAACATCCCAACTCCAAATATGATGGTGGAA
GAAGGTAAAGGAGAGGCCCACAAGGCTGTTATGCATGGTATAAATGGCATCCCATCTCCT
GTTCCTTGCCTCCATGGAGTACCTTGGCCTTTTCCATGGAATGCTGCAGTTCCTATGTCG
GCTATTTGCCCCATTCCCTTCCCTATGCCATTCTTCCCTACACCTTATTGGAATTGCAGT
GTGCCTCCTTGGAGTAATCCTTGGCTGAGTCCACCTCTGCGAGCAGCAAACGAGAAAACA
TCAGGTTCTGATCCTACTTCGCCTTTAGGGAAGCATTCTAGAGAAGGGGATTTGCTTAAG
CCAAGCAATCCTGGGGGCAAAGAACAATCAGACCAAAAGTATTCAGAGGGGTCTATTTTG
GTCCCAAAAACATTGCGGATTGATGATCCTGATGAAGCTGCTAAGAGTTCTATATGGTCA
ACACTTGGGATTAAATATGATTCTGCTAACAGGGGAGAGTTTTTCAAGGCCTTACAACCA
AAAAGCAATGACAAGCACAACAAAGCCAATACATCTCCAGTATTGCATACTAACCCTGCA
GCTTTATCTAGATCTATCACCTTCCAACAAAGTGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055798
PEP Infomation

pacid=37451265 transcript=PGSC0003DMT400083080 locus=PGSC0003DMG400033046 ID=PGSC0003DMT400083080.v4.03 annot-version=v4.03
Sequence

MTCDSEIKLFGKILPVVVSGAGRGLSGSDGVRYEGNRNRSDLDRCLEGSKASSVEKDEGI
EYEKQEAEKDDISGELSEAKSEEGDQNQMMEESENTKTPSESESSPKSSTEEDPQAVKSS
ETGNEPTNVSNSEQNNLKKPDKILPCPRCNSSDTKFCYYNNNNVNQPRHFCRSCQRYWTA
GGTMRNLPVGAGRRKNKNLASQYRHISIPEGLLAAGIESPNGLIHHPIFKPNGTILSFGP
DIPLCEPMASALNQAEKRVSNGIQNGSHKSEVNNSSCKGGDTGDECYRGSNIPTPNMMVE
EGKGEAHKAVMHGINGIPSPVPCLHGVPWPFPWNAAVPMSAICPIPFPMPFFPTPYWNCS
VPPWSNPWLSPPLRAANEKTSGSDPTSPLGKHSREGDLLKPSNPGGKEQSDQKYSEGSIL
VPKTLRIDDPDEAAKSSIWSTLGIKYDSANRGEFFKALQPKSNDKHNKANTSPVLHTNPA
ALSRSITFQQSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400083080
Transcript Infomation

pacid=37451265 locus=PGSC0003DMG400033046 ID=PGSC0003DMT400083080.v4.03 annot-version=v4.03
Sequence

ATGACTTGTGATTCAGAGATCAAGCTGTTTGGCAAGATACTTCCAGTGGTCGTCTCCGGC
GCCGGTAGGGGTTTGTCTGGTAGTGATGGTGTTAGATATGAGGGAAATAGAAATAGGTCT
GATCTTGATCGATGTTTAGAGGGAAGTAAAGCAAGCAGTGTAGAGAAAGATGAAGGAATT
GAGTATGAAAAGCAAGAAGCTGAAAAGGATGATATATCTGGAGAGCTCAGTGAAGCTAAA
TCTGAGGAGGGAGATCAAAATCAGATGATGGAGGAATCAGAAAATACTAAGACTCCATCA
GAATCAGAGAGCAGTCCTAAATCTTCAACTGAGGAAGACCCTCAAGCAGTAAAATCATCC
GAGACTGGGAATGAACCAACTAATGTGTCAAATTCTGAGCAGAACAATCTGAAGAAGCCA
GACAAAATCCTCCCATGCCCTCGTTGCAATAGTTCGGATACAAAATTCTGTTACTATAAT
AACAACAATGTCAACCAGCCTCGTCATTTCTGCAGGAGCTGCCAGAGGTATTGGACTGCC
GGTGGAACCATGAGGAATCTCCCTGTGGGAGCTGGTCGTCGCAAGAACAAGAATCTTGCA
TCTCAATATCGTCATATAAGTATCCCTGAAGGATTATTAGCAGCAGGAATTGAATCTCCA
AATGGATTAATTCATCATCCAATATTCAAACCAAATGGCACTATTCTATCCTTTGGTCCC
GACATACCCCTGTGTGAACCTATGGCTTCTGCATTAAATCAAGCAGAGAAAAGGGTATCG
AATGGTATCCAAAATGGTTCTCACAAATCAGAAGTCAACAATTCTTCTTGCAAAGGGGGA
GATACTGGGGATGAGTGCTATAGGGGGTCTAACATCCCAACTCCAAATATGATGGTGGAA
GAAGGTAAAGGAGAGGCCCACAAGGCTGTTATGCATGGTATAAATGGCATCCCATCTCCT
GTTCCTTGCCTCCATGGAGTACCTTGGCCTTTTCCATGGAATGCTGCAGTTCCTATGTCG
GCTATTTGCCCCATTCCCTTCCCTATGCCATTCTTCCCTACACCTTATTGGAATTGCAGT
GTGCCTCCTTGGAGTAATCCTTGGCTGAGTCCACCTCTGCGAGCAGCAAACGAGAAAACA
TCAGGTTCTGATCCTACTTCGCCTTTAGGGAAGCATTCTAGAGAAGGGGATTTGCTTAAG
CCAAGCAATCCTGGGGGCAAAGAACAATCAGACCAAAAGTATTCAGAGGGGTCTATTTTG
GTCCCAAAAACATTGCGGATTGATGATCCTGATGAAGCTGCTAAGAGTTCTATATGGTCA
ACACTTGGGATTAAATATGATTCTGCTAACAGGGGAGAGTTTTTCAAGGCCTTACAACCA
AAAAGCAATGACAAGCACAACAAAGCCAATACATCTCCAGTATTGCATACTAACCCTGCA
GCTTTATCTAGATCTATCACCTTCCAACAAAGTGCCTAA