Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083065
CDS Infomation

pacid=37452988 polypeptide=PGSC0003DMP400055789 locus=PGSC0003DMG400033038 ID=PGSC0003DMT400083065.v4.03 annot-version=v4.03
Sequence

ATGGCGGTAGGTATAAGACACTGCACCGTAAGGTTCATGGAACTTGAATCATCATCACTC
ATGAAATGCTCGCTCTCGTCTTCACCTCTGTATAGAAAGCAATCAGTTCACTTCTCCAAT
TCTTCTAGTCAAAGATATAATCAATGTTGTTCATTGTCGATGAATGGATGCCAAGGCGAT
TCAAGAGATCCTATTGGAACCGTTGAAACTCGAACTTTGCCTGCAGTTTCTAGCCCTGCA
TTGGCCATGGAACGTCTCAATTCTGCCATCTCCGATATGATTAAGTCCGATCCTCCGCCT
TACAATTCCGGCATTATTCGCCTTGAGGTGCCAATTGAAGAGCAGATTGAAGCACTTGAG
TGGCTTCATGCGCAGAACCATCTCCTCCTCCCTCGCTGCTTCTTCTCCGGTCGAAGAGTT
GCTTCTGAAATGTGCATCAACGGAGCTTCTTCTCATTCTAAATTGGTCAGTGTAGCTGGT
GTTGGCTCTGCTGTCTTCTTTACTCATTTACGCCCCTTTTCATTAGACGATTGGCGTGCT
ATAAGAAGGTTCCTCTCCAAGAAATGTCCACTAATTCGTGCTTATGGGGCAATCCGATTT
GATGCAACAGCCGATATAGCTTCTGAATGGAGTGCTTTTGGCTCATTTTATTTCATGGTT
CCTCAGGTTGAGTTTGATGAGCTTGAAGGAAGTTCAATTATTGCTGCAACTATTGCATGG
GATAATGCTGCCTCATGGACATACCAGAGGGCAATAGATGCACTTCAGGCCACAATATGG
CAGCTTTCCTCCGTTCTTATAACAGTGCAGAAGAAAAATCCTCATTCGCATATACTTGAC
AGTACTCATGTGCCGGGTAAAGCGTCTTGGGACAATGTGGTTAAGCGTGCTTTGCAAATA
ATAAGCAGAAATGACCCCGTACTGATCAAGGTGGTACTTGCTCGTAGCACCAGAGTTGTG
ACAGCTGCAGATATTGATCCGCTAACATGGCTGGCTTGCTTAAAGGTTGAAGGAGAAAAT
GCATATCAGTTCTGTTTGCAACCTCCCCATTCGCCGGCATTCATTGGAAACACTCCAGAG
CAGCTATTTCATCGGGACCGCCTCAGCATTTGTAGTGAGGCTTTAGCTGGAACACGGGCT
AGGGGTGGATCAGAGCTTCTGGATCTTAAGATAGAACAGGATTTACTATCCAGTGCTAAA
GACCATAATGAGTTTGCTATAGTACGGGAGTGCATAAGAAGAAGATTGGAGGCTGTGTGT
TCAAGCGTTTTAATTGAACCAAAGAAAGCAATAAGAAAATTTACAAGAGTTCAGCATCTT
TACGCTCGATTGAGGGGGAGACTACAGGCTGAAGATGATGAGTTTAAGATTTTGTCGTCC
GTGCACCCTACTCCAGCAGTTTGTGGGTATCCTACAGAAGATGCACGGGCTTTTATTTCA
GAAACGGAAATGTTTGACCGAGGAATGTATGCTGGTCCTGTTGGTTGGTTTGGAGGAGAA
GAGAGTGAATTTGCTGTTGGAATAAGGTCAGCTTTGGTTGAAAAGGGTCTTGGTGCATTA
ATTTATGCGGGAACTGGGATAGTGGAAGGAAGTGATTCATCTCTAGAATGGGAAGAGCTA
GAGCTAAAGACTTCACAGTTCACCAAATTGATGAAACTTGAGGCACCTCTTTTGACTAGA
GGACAAAATAGGATTATCAATCAGAATCAGAAAGTTCAAAGAGCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055789
PEP Infomation

pacid=37452988 transcript=PGSC0003DMT400083065 locus=PGSC0003DMG400033038 ID=PGSC0003DMT400083065.v4.03 annot-version=v4.03
Sequence

MAVGIRHCTVRFMELESSSLMKCSLSSSPLYRKQSVHFSNSSSQRYNQCCSLSMNGCQGD
SRDPIGTVETRTLPAVSSPALAMERLNSAISDMIKSDPPPYNSGIIRLEVPIEEQIEALE
WLHAQNHLLLPRCFFSGRRVASEMCINGASSHSKLVSVAGVGSAVFFTHLRPFSLDDWRA
IRRFLSKKCPLIRAYGAIRFDATADIASEWSAFGSFYFMVPQVEFDELEGSSIIAATIAW
DNAASWTYQRAIDALQATIWQLSSVLITVQKKNPHSHILDSTHVPGKASWDNVVKRALQI
ISRNDPVLIKVVLARSTRVVTAADIDPLTWLACLKVEGENAYQFCLQPPHSPAFIGNTPE
QLFHRDRLSICSEALAGTRARGGSELLDLKIEQDLLSSAKDHNEFAIVRECIRRRLEAVC
SSVLIEPKKAIRKFTRVQHLYARLRGRLQAEDDEFKILSSVHPTPAVCGYPTEDARAFIS
ETEMFDRGMYAGPVGWFGGEESEFAVGIRSALVEKGLGALIYAGTGIVEGSDSSLEWEEL
ELKTSQFTKLMKLEAPLLTRGQNRIINQNQKVQRA*

Transcript Sequence

Transcript ID

PGSC0003DMT400083065
Transcript Infomation

pacid=37452988 locus=PGSC0003DMG400033038 ID=PGSC0003DMT400083065.v4.03 annot-version=v4.03
Sequence

ATGGCGGTAGGTATAAGACACTGCACCGTAAGGTTCATGGAACTTGAATCATCATCACTC
ATGAAATGCTCGCTCTCGTCTTCACCTCTGTATAGAAAGCAATCAGTTCACTTCTCCAAT
TCTTCTAGTCAAAGATATAATCAATGTTGTTCATTGTCGATGAATGGATGCCAAGGCGAT
TCAAGAGATCCTATTGGAACCGTTGAAACTCGAACTTTGCCTGCAGTTTCTAGCCCTGCA
TTGGCCATGGAACGTCTCAATTCTGCCATCTCCGATATGATTAAGTCCGATCCTCCGCCT
TACAATTCCGGCATTATTCGCCTTGAGGTGCCAATTGAAGAGCAGATTGAAGCACTTGAG
TGGCTTCATGCGCAGAACCATCTCCTCCTCCCTCGCTGCTTCTTCTCCGGTCGAAGAGTT
GCTTCTGAAATGTGCATCAACGGAGCTTCTTCTCATTCTAAATTGGTCAGTGTAGCTGGT
GTTGGCTCTGCTGTCTTCTTTACTCATTTACGCCCCTTTTCATTAGACGATTGGCGTGCT
ATAAGAAGGTTCCTCTCCAAGAAATGTCCACTAATTCGTGCTTATGGGGCAATCCGATTT
GATGCAACAGCCGATATAGCTTCTGAATGGAGTGCTTTTGGCTCATTTTATTTCATGGTT
CCTCAGGTTGAGTTTGATGAGCTTGAAGGAAGTTCAATTATTGCTGCAACTATTGCATGG
GATAATGCTGCCTCATGGACATACCAGAGGGCAATAGATGCACTTCAGGCCACAATATGG
CAGCTTTCCTCCGTTCTTATAACAGTGCAGAAGAAAAATCCTCATTCGCATATACTTGAC
AGTACTCATGTGCCGGGTAAAGCGTCTTGGGACAATGTGGTTAAGCGTGCTTTGCAAATA
ATAAGCAGAAATGACCCCGTACTGATCAAGGTGGTACTTGCTCGTAGCACCAGAGTTGTG
ACAGCTGCAGATATTGATCCGCTAACATGGCTGGCTTGCTTAAAGGTTGAAGGAGAAAAT
GCATATCAGTTCTGTTTGCAACCTCCCCATTCGCCGGCATTCATTGGAAACACTCCAGAG
CAGCTATTTCATCGGGACCGCCTCAGCATTTGTAGTGAGGCTTTAGCTGGAACACGGGCT
AGGGGTGGATCAGAGCTTCTGGATCTTAAGATAGAACAGGATTTACTATCCAGTGCTAAA
GACCATAATGAGTTTGCTATAGTACGGGAGTGCATAAGAAGAAGATTGGAGGCTGTGTGT
TCAAGCGTTTTAATTGAACCAAAGAAAGCAATAAGAAAATTTACAAGAGTTCAGCATCTT
TACGCTCGATTGAGGGGGAGACTACAGGCTGAAGATGATGAGTTTAAGATTTTGTCGTCC
GTGCACCCTACTCCAGCAGTTTGTGGGTATCCTACAGAAGATGCACGGGCTTTTATTTCA
GAAACGGAAATGTTTGACCGAGGAATGTATGCTGGTCCTGTTGGTTGGTTTGGAGGAGAA
GAGAGTGAATTTGCTGTTGGAATAAGGTCAGCTTTGGTTGAAAAGGGTCTTGGTGCATTA
ATTTATGCGGGAACTGGGATAGTGGAAGGAAGTGATTCATCTCTAGAATGGGAAGAGCTA
GAGCTAAAGACTTCACAGTTCACCAAATTGATGAAACTTGAGGCACCTCTTTTGACTAGA
GGACAAAATAGGATTATCAATCAGAATCAGAAAGTTCAAAGAGCCTGA