Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400083039
CDS Infomation

pacid=37450134 polypeptide=PGSC0003DMP400055770 locus=PGSC0003DMG400033032 ID=PGSC0003DMT400083039.v4.03 annot-version=v4.03
Sequence

ATGATGTTGAACAATATAAAGTTGGAATCTGCTGTAGTTAACAAGTCCTTTGCTACTCTT
TTATATGAGTGGGTTCGGATGGGTTATTCAGGCAAAATCTCAGTTGAGAAGTTTAGAAAA
GATTTAGAAGAAATGTTCAGTAGCAGAAGCTCTTTGTTTGAAAAGTGGAGCAAGAATTCT
GGAAGTTCTTCCTCGCACTCGGAAATGCAATCCCCTGATAGACCTTATCACCCTTCAACA
CTTGACAACCTTGGGAAGCATGATACACCTTATTCTAATGGGATCAATCTTCGTATATTT
TTCTCGGATTCACTGAATGACTTATTCTGCCTTCCTGAAACTGCTGTTGATGGTATGAGA
TTATCCAGTCTTGATGTAAAACCAATTGACTTTTTCCATTTCTTCCACAAAGCCCTGAAA
AAAGATTTGCAGTATGCTCTTTCTCTGTCAGTTAAGTTGGCTGAAGATGTGGGACTCCTT
GCTGAATTTGAAAGACATTTCCATCACGTACGATTTCTATATCAGCTGCATAGTAAGTCC
GAGGATGAAATTGCCTTTCCTGCCTTGGAATCTAAGGGACAGCTCCAAAATGTCAGCCAT
TCGTATGGCATTGACCATAAGTTGGAGGTTGAGCAATTCGATAGAATTTCTATCATCTTA
AATGAGATCACCAGTTTGCAAGGTTATGTGGACATGATTGACAGTAATAAGCTGAAATAC
AAAAGGTTGTGCTTAAATCTACATGATACATGCATATCTATGCATAAAACACTCACTGAC
CACATCTACCGTGAAGAAGTTGAACTTTGGCCACTATTCAAAGAACATTTTTCTGTTGAG
GAACAAGAAAAGATTATTGGAGACATGCTTGGACGAACCAAAGCGGAGAATCTACAAGAA
ATGATTCCCTGGTTGATGGCATCTCTAACACCAGAAGAACAACATGGCATTGTGTCAATC
TGGCGTAAAGTCACAAAGAATACAAAGTTTTTTGAGTGGCTGGGAGAGTGGTGGGAAGGT
ATAAAAAGAGATGAGAGTGTAAACGCAGAAAAGGGATCAAAGCTTTCTCTTGCATTGGCT
GTTGATCCTTTAGAAGTTATGTCTACATATTTGTCAAGAGATGATTTCAGGAGTTCAAGC
GTCTTCCACGAGAAAGGGGAGAACTTTTCATCGACAGAGTGTGCTGATCATGATTTAGAT
CAATCTGGACTTTTCGCTGCAGATAAATCCCAGAATGCCAAGGGAAACAAAAATGTTAAT
CGAGCCATAGATATATCTCAGCATTCTACTGATGTTGACAAGAAAAGATGCAATGACACA
ACAGACATTGCTAATCAAAAAGAAACAACTTGTCAGGATATAAAATTATATGAGCAGTCA
AAGCAAAAGGATCACAAGGAGCACCATCTAATGCTGACTCAAGACAAGCTGGTTGACGCA
ATAAGAAGAGTATCAGGCGACTCCTCTTTGGATTCTGTAAAGAAATCACACCTCATGCAG
AGCTTGCTAATGAGGCAAATACATTTTCAACTTCTATCCTTTGATTTGTTTCTTGGGAAG
AAGCCATATATGGTTACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400055770
PEP Infomation

pacid=37450134 transcript=PGSC0003DMT400083039 locus=PGSC0003DMG400033032 ID=PGSC0003DMT400083039.v4.03 annot-version=v4.03
Sequence

MMLNNIKLESAVVNKSFATLLYEWVRMGYSGKISVEKFRKDLEEMFSSRSSLFEKWSKNS
GSSSSHSEMQSPDRPYHPSTLDNLGKHDTPYSNGINLRIFFSDSLNDLFCLPETAVDGMR
LSSLDVKPIDFFHFFHKALKKDLQYALSLSVKLAEDVGLLAEFERHFHHVRFLYQLHSKS
EDEIAFPALESKGQLQNVSHSYGIDHKLEVEQFDRISIILNEITSLQGYVDMIDSNKLKY
KRLCLNLHDTCISMHKTLTDHIYREEVELWPLFKEHFSVEEQEKIIGDMLGRTKAENLQE
MIPWLMASLTPEEQHGIVSIWRKVTKNTKFFEWLGEWWEGIKRDESVNAEKGSKLSLALA
VDPLEVMSTYLSRDDFRSSSVFHEKGENFSSTECADHDLDQSGLFAADKSQNAKGNKNVN
RAIDISQHSTDVDKKRCNDTTDIANQKETTCQDIKLYEQSKQKDHKEHHLMLTQDKLVDA
IRRVSGDSSLDSVKKSHLMQSLLMRQIHFQLLSFDLFLGKKPYMVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400083039
Transcript Infomation

pacid=37450134 locus=PGSC0003DMG400033032 ID=PGSC0003DMT400083039.v4.03 annot-version=v4.03
Sequence

ATGATGTTGAACAATATAAAGTTGGAATCTGCTGTAGTTAACAAGTCCTTTGCTACTCTT
TTATATGAGTGGGTTCGGATGGGTTATTCAGGCAAAATCTCAGTTGAGAAGTTTAGAAAA
GATTTAGAAGAAATGTTCAGTAGCAGAAGCTCTTTGTTTGAAAAGTGGAGCAAGAATTCT
GGAAGTTCTTCCTCGCACTCGGAAATGCAATCCCCTGATAGACCTTATCACCCTTCAACA
CTTGACAACCTTGGGAAGCATGATACACCTTATTCTAATGGGATCAATCTTCGTATATTT
TTCTCGGATTCACTGAATGACTTATTCTGCCTTCCTGAAACTGCTGTTGATGGTATGAGA
TTATCCAGTCTTGATGTAAAACCAATTGACTTTTTCCATTTCTTCCACAAAGCCCTGAAA
AAAGATTTGCAGTATGCTCTTTCTCTGTCAGTTAAGTTGGCTGAAGATGTGGGACTCCTT
GCTGAATTTGAAAGACATTTCCATCACGTACGATTTCTATATCAGCTGCATAGTAAGTCC
GAGGATGAAATTGCCTTTCCTGCCTTGGAATCTAAGGGACAGCTCCAAAATGTCAGCCAT
TCGTATGGCATTGACCATAAGTTGGAGGTTGAGCAATTCGATAGAATTTCTATCATCTTA
AATGAGATCACCAGTTTGCAAGGTTATGTGGACATGATTGACAGTAATAAGCTGAAATAC
AAAAGGTTGTGCTTAAATCTACATGATACATGCATATCTATGCATAAAACACTCACTGAC
CACATCTACCGTGAAGAAGTTGAACTTTGGCCACTATTCAAAGAACATTTTTCTGTTGAG
GAACAAGAAAAGATTATTGGAGACATGCTTGGACGAACCAAAGCGGAGAATCTACAAGAA
ATGATTCCCTGGTTGATGGCATCTCTAACACCAGAAGAACAACATGGCATTGTGTCAATC
TGGCGTAAAGTCACAAAGAATACAAAGTTTTTTGAGTGGCTGGGAGAGTGGTGGGAAGGT
ATAAAAAGAGATGAGAGTGTAAACGCAGAAAAGGGATCAAAGCTTTCTCTTGCATTGGCT
GTTGATCCTTTAGAAGTTATGTCTACATATTTGTCAAGAGATGATTTCAGGAGTTCAAGC
GTCTTCCACGAGAAAGGGGAGAACTTTTCATCGACAGAGTGTGCTGATCATGATTTAGAT
CAATCTGGACTTTTCGCTGCAGATAAATCCCAGAATGCCAAGGGAAACAAAAATGTTAAT
CGAGCCATAGATATATCTCAGCATTCTACTGATGTTGACAAGAAAAGATGCAATGACACA
ACAGACATTGCTAATCAAAAAGAAACAACTTGTCAGGATATAAAATTATATGAGCAGTCA
AAGCAAAAGGATCACAAGGAGCACCATCTAATGCTGACTCAAGACAAGCTGGTTGACGCA
ATAAGAAGAGTATCAGGCGACTCCTCTTTGGATTCTGTAAAGAAATCACACCTCATGCAG
AGCTTGCTAATGAGGCAAATACATTTTCAACTTCTATCCTTTGATTTGTTTCTTGGGAAG
AAGCCATATATGGTTACATAA