Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082799
CDS Infomation

pacid=37432541 polypeptide=PGSC0003DMP400055725 locus=PGSC0003DMG400032821 ID=PGSC0003DMT400082799.v4.03 annot-version=v4.03
Sequence

ATGGATATAGCATTGGAAGAAGAAATATTTGAGCCAGCAAGTCCAAGCGCACAATATTTG
AATAGCTCCAATTTATCACTTTCAGTAATTGCTGTTTTGGAATCAAAAATTCCAATTGAA
TATGAAGATTCACTTCCCATAAATTTACTCAAAGATGTATTTGTACCTATAAATCCAAGA
TTTTCCTCAATTATGGTCACGGGCAAAAAAGGAACAAAAAAATGGAAGCGAGTAGAAGTG
AACTATCAGGACCATATTAAAACCCCAATATTTCCAACTCAAAAACCAATCGAGTTCTAT
GATGAATGCTTCTCCACTTATATATCAAACTTAGCAATGGAAAAATTCCCGCAAAATCGA
CCACTATGGGAAATTCACTTATTCAAATATCCAACGAGCGATGCGGCGGGAAATATAATT
TTCAAACTTCATCATTCACTAGGAGATGGTTATTCATTAATGGGTGCACTTCTTTCATGT
TTACAACGAGTCGATAATCCTTCACTTCCACTAACATTTCCTTCCCGCCAAAAATCGAAT
TTCAATAATAATAACAAAGGGTATATTAGTAACTTTAAAATCGTACCTCGATTTTTCAAA
GGGATTGTGAATACATTGTATGATTTTGGATGGAGTACATTGAAGAGCACTTTGATTGAA
GATGATCGGACGGCGATTCATTCCGGTGTTGACGGAGTTGAGTTCCGATCGCCTGTTTTG
GTTACCAACACATTTTTGCTCGATAGCCTCAAGCAAATTAAGACCAATTTGAACGTGACA
ATAAATGATGTGATAACAGGGATAGTGATATATGGAACAAGATTATACATGGAAGAAGTA
AATAAAGAAACATGCAATGGAAAATGCAGTGCATTGGTTTTATTCAACACAAGGGCACTT
GGTGGAAGTTATAAATCAGTTAGTGACATGATAAGGCCTAATTCTGATATGCCATGGGGA
AATCATTTCACTTTTTTGCCTATCTCATTACCAAAATTAACTAATGATAAAAGTAATAAT
CCTCTTTATTTTGTTCAAAAAGCTCATAGAATTATAGACAGGAAAAGGAATTCTGCATCT
GTTTGGCTTACTAGTAAATTGCTTGATTTATTGAGGAAGCTAAGAGGTCCTGAGGCGACA
GCTCGATTCATTCATGGGACATTGAAGAACACAAGCATGGCATTAACAAATATGATAGGG
CCAGTGGAAGAGATGGCTTTGGCTAATCATCCTGTTAAAGGATTATATTTTGTTGTCACT
GGTGCTCCACAGAGTTGCTCAGTGACAATAGTGAGTTATGTGGATAAGCTAAGAATTGCA
ATAGTTGTGGAGAAAGATTTTATTGATCCAAATAAGTTGAAATATTGTATTGAGAATGCA
TATGAATCTATTTTCAAGGCTGCAATCAACTCTTCTAAAGTGGAAAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400055725
PEP Infomation

pacid=37432541 transcript=PGSC0003DMT400082799 locus=PGSC0003DMG400032821 ID=PGSC0003DMT400082799.v4.03 annot-version=v4.03
Sequence

MDIALEEEIFEPASPSAQYLNSSNLSLSVIAVLESKIPIEYEDSLPINLLKDVFVPINPR
FSSIMVTGKKGTKKWKRVEVNYQDHIKTPIFPTQKPIEFYDECFSTYISNLAMEKFPQNR
PLWEIHLFKYPTSDAAGNIIFKLHHSLGDGYSLMGALLSCLQRVDNPSLPLTFPSRQKSN
FNNNNKGYISNFKIVPRFFKGIVNTLYDFGWSTLKSTLIEDDRTAIHSGVDGVEFRSPVL
VTNTFLLDSLKQIKTNLNVTINDVITGIVIYGTRLYMEEVNKETCNGKCSALVLFNTRAL
GGSYKSVSDMIRPNSDMPWGNHFTFLPISLPKLTNDKSNNPLYFVQKAHRIIDRKRNSAS
VWLTSKLLDLLRKLRGPEATARFIHGTLKNTSMALTNMIGPVEEMALANHPVKGLYFVVT
GAPQSCSVTIVSYVDKLRIAIVVEKDFIDPNKLKYCIENAYESIFKAAINSSKVEK*

Transcript Sequence

Transcript ID

PGSC0003DMT400082799
Transcript Infomation

pacid=37432541 locus=PGSC0003DMG400032821 ID=PGSC0003DMT400082799.v4.03 annot-version=v4.03
Sequence

ATGGATATAGCATTGGAAGAAGAAATATTTGAGCCAGCAAGTCCAAGCGCACAATATTTG
AATAGCTCCAATTTATCACTTTCAGTAATTGCTGTTTTGGAATCAAAAATTCCAATTGAA
TATGAAGATTCACTTCCCATAAATTTACTCAAAGATGTATTTGTACCTATAAATCCAAGA
TTTTCCTCAATTATGGTCACGGGCAAAAAAGGAACAAAAAAATGGAAGCGAGTAGAAGTG
AACTATCAGGACCATATTAAAACCCCAATATTTCCAACTCAAAAACCAATCGAGTTCTAT
GATGAATGCTTCTCCACTTATATATCAAACTTAGCAATGGAAAAATTCCCGCAAAATCGA
CCACTATGGGAAATTCACTTATTCAAATATCCAACGAGCGATGCGGCGGGAAATATAATT
TTCAAACTTCATCATTCACTAGGAGATGGTTATTCATTAATGGGTGCACTTCTTTCATGT
TTACAACGAGTCGATAATCCTTCACTTCCACTAACATTTCCTTCCCGCCAAAAATCGAAT
TTCAATAATAATAACAAAGGGTATATTAGTAACTTTAAAATCGTACCTCGATTTTTCAAA
GGGATTGTGAATACATTGTATGATTTTGGATGGAGTACATTGAAGAGCACTTTGATTGAA
GATGATCGGACGGCGATTCATTCCGGTGTTGACGGAGTTGAGTTCCGATCGCCTGTTTTG
GTTACCAACACATTTTTGCTCGATAGCCTCAAGCAAATTAAGACCAATTTGAACGTGACA
ATAAATGATGTGATAACAGGGATAGTGATATATGGAACAAGATTATACATGGAAGAAGTA
AATAAAGAAACATGCAATGGAAAATGCAGTGCATTGGTTTTATTCAACACAAGGGCACTT
GGTGGAAGTTATAAATCAGTTAGTGACATGATAAGGCCTAATTCTGATATGCCATGGGGA
AATCATTTCACTTTTTTGCCTATCTCATTACCAAAATTAACTAATGATAAAAGTAATAAT
CCTCTTTATTTTGTTCAAAAAGCTCATAGAATTATAGACAGGAAAAGGAATTCTGCATCT
GTTTGGCTTACTAGTAAATTGCTTGATTTATTGAGGAAGCTAAGAGGTCCTGAGGCGACA
GCTCGATTCATTCATGGGACATTGAAGAACACAAGCATGGCATTAACAAATATGATAGGG
CCAGTGGAAGAGATGGCTTTGGCTAATCATCCTGTTAAAGGATTATATTTTGTTGTCACT
GGTGCTCCACAGAGTTGCTCAGTGACAATAGTGAGTTATGTGGATAAGCTAAGAATTGCA
ATAGTTGTGGAGAAAGATTTTATTGATCCAAATAAGTTGAAATATTGTATTGAGAATGCA
TATGAATCTATTTTCAAGGCTGCAATCAACTCTTCTAAAGTGGAAAAGTAG