Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082785
CDS Infomation

pacid=37434316 polypeptide=PGSC0003DMP400055715 locus=PGSC0003DMG400032816 ID=PGSC0003DMT400082785.v4.03 annot-version=v4.03
Sequence

ATGGGTGTGGCTAAAAATTTGATCTTTTTAAGAAAGAATTCTGGGGTTTGGCTTAGAATT
CTGTTTTATTTATGGTTTTTCTTTGGAGGGTTTTGCCAAGTAAAGGGACTCAGACCTCTT
AGAGAAAAGTATCGTTCGTGGGGCGATGAGCAGTGGCTTTCTGCAAGGAAGGATGAGAAT
GAATTTGGGCCATTTTCTGCTTGGAATATAACAGGAACCTTCAGAGGGTCTTGGAGGTTC
CTAGATTCAAAGAATAGCTCTTCCCTTTTTCCTGATTTCAAGAAATCCAATGGAAACTCT
GTCCTGGAATTGATTAGTACTCCTACAAAAATAACTGGTGTACACTATGTTCAGGGAGTA
ATAATTTTCCATGATATTTTTGACAATGAACGTGGGGGTGCTCAAATCAGAGTAGAAGGT
GTATATGTATGGCCATTCAGACAACTTCGGATGGTAGCTCACAGCAGCAAAGAGGGTGAC
TTTGGCCAGGAAGATGATTATCTGTTATCAAATCCTTATCATTTGCTTGGAACTTTCTCA
TCTCAGGTCTTCCAAGAGTCGCCACGAGATAAGATTTGGAAACGGAAACACTCGCCTATT
TATGAGATGGAGAAACATTGTAATGTTGAAATTGCAGCACAAATTTCTCGAGTGTCATCT
TCCACTAATGATGGAGATCAAGATCATTATCATCTAGAAGGATTGATGGAGAGCCCTTCA
GTGGATGATGATGGAGACTGTTTCTCCCCCATGCTATTGAATGCCACTTCTATCAATATA
GAGGTTTACTACAACAAAGCAGTTAACTACACGTTGATGGTCACTTTTGTTTCTTTTCTT
CAAGTGCTCCTTCTCATTCGGCAAATGGAACATAGCAATACCCAATCAGGAGCTGCCAAA
GTTTCAATTTTGATGATCGGGCAACAGGGAATAATTGATGCTTATCTTTGTCTTCTACAT
CTGACTGCAGGCATACTTGTTGAATCGCTGTTCAATGCTTTTGCAACCGCTGCATTTTTC
AAGTTTGTTGTCTTCTCGATATTTGAGATGAGATATCTTCTCGCTATATGGAAGGCAAAT
AGACCTATGACTAGTGGAGAGGGCTGGCAAGCAATGAGACGTGAACTGTCAGTTCTGTAC
AGCCGCTTCTATGGGATCCTTTTAGGTGGAATTTTAATCATGTATGAATTCCATAGGTTT
CTGCGGCCACTCCTTTTCCTTTTACACTCTTTTTGGATACCTCAAATTGTAACTAACGTT
ATTCGTGACTCGAGAAAACCGTTGCATCCTCATTACATCTTGGGAATGACTGTTACTCGG
CTAGCAATTCCACTATATGTCTTTGGTTGTCCTCACAATTTTATGCGCATAGAGCCCGAC
AAAAGTTGGTGCATCTGTTTGGGAATTTTCATGGCAGTGCAGGCGTTAGTTCTTCTTTTG
CAGCACTATCTTGGATCTCGGTGGTTCATTCCACGACAGATTTTACCTGAAAAATATAGT
TATTACAGAAGATTTGACCAGAAAGGAAATCATGCTACTGACTGTGTCATTTGCATGACT
GCTATTGATCTCACTCAACGGTCAAATAATTGCATGGTGACGCCCTGTGATCATTTCTTT
CATTCGGGTTGTTTGCAAAGATGGATGGACATAAAGATGGAGTGCCCAACATGCCGACGT
CCTCTTCCTCCAGCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055715
PEP Infomation

pacid=37434316 transcript=PGSC0003DMT400082785 locus=PGSC0003DMG400032816 ID=PGSC0003DMT400082785.v4.03 annot-version=v4.03
Sequence

MGVAKNLIFLRKNSGVWLRILFYLWFFFGGFCQVKGLRPLREKYRSWGDEQWLSARKDEN
EFGPFSAWNITGTFRGSWRFLDSKNSSSLFPDFKKSNGNSVLELISTPTKITGVHYVQGV
IIFHDIFDNERGGAQIRVEGVYVWPFRQLRMVAHSSKEGDFGQEDDYLLSNPYHLLGTFS
SQVFQESPRDKIWKRKHSPIYEMEKHCNVEIAAQISRVSSSTNDGDQDHYHLEGLMESPS
VDDDGDCFSPMLLNATSINIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAK
VSILMIGQQGIIDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAN
RPMTSGEGWQAMRRELSVLYSRFYGILLGGILIMYEFHRFLRPLLFLLHSFWIPQIVTNV
IRDSRKPLHPHYILGMTVTRLAIPLYVFGCPHNFMRIEPDKSWCICLGIFMAVQALVLLL
QHYLGSRWFIPRQILPEKYSYYRRFDQKGNHATDCVICMTAIDLTQRSNNCMVTPCDHFF
HSGCLQRWMDIKMECPTCRRPLPPA*

Transcript Sequence

Transcript ID

PGSC0003DMT400082785
Transcript Infomation

pacid=37434316 locus=PGSC0003DMG400032816 ID=PGSC0003DMT400082785.v4.03 annot-version=v4.03
Sequence

ATGGGTGTGGCTAAAAATTTGATCTTTTTAAGAAAGAATTCTGGGGTTTGGCTTAGAATT
CTGTTTTATTTATGGTTTTTCTTTGGAGGGTTTTGCCAAGTAAAGGGACTCAGACCTCTT
AGAGAAAAGTATCGTTCGTGGGGCGATGAGCAGTGGCTTTCTGCAAGGAAGGATGAGAAT
GAATTTGGGCCATTTTCTGCTTGGAATATAACAGGAACCTTCAGAGGGTCTTGGAGGTTC
CTAGATTCAAAGAATAGCTCTTCCCTTTTTCCTGATTTCAAGAAATCCAATGGAAACTCT
GTCCTGGAATTGATTAGTACTCCTACAAAAATAACTGGTGTACACTATGTTCAGGGAGTA
ATAATTTTCCATGATATTTTTGACAATGAACGTGGGGGTGCTCAAATCAGAGTAGAAGGT
GTATATGTATGGCCATTCAGACAACTTCGGATGGTAGCTCACAGCAGCAAAGAGGGTGAC
TTTGGCCAGGAAGATGATTATCTGTTATCAAATCCTTATCATTTGCTTGGAACTTTCTCA
TCTCAGGTCTTCCAAGAGTCGCCACGAGATAAGATTTGGAAACGGAAACACTCGCCTATT
TATGAGATGGAGAAACATTGTAATGTTGAAATTGCAGCACAAATTTCTCGAGTGTCATCT
TCCACTAATGATGGAGATCAAGATCATTATCATCTAGAAGGATTGATGGAGAGCCCTTCA
GTGGATGATGATGGAGACTGTTTCTCCCCCATGCTATTGAATGCCACTTCTATCAATATA
GAGGTTTACTACAACAAAGCAGTTAACTACACGTTGATGGTCACTTTTGTTTCTTTTCTT
CAAGTGCTCCTTCTCATTCGGCAAATGGAACATAGCAATACCCAATCAGGAGCTGCCAAA
GTTTCAATTTTGATGATCGGGCAACAGGGAATAATTGATGCTTATCTTTGTCTTCTACAT
CTGACTGCAGGCATACTTGTTGAATCGCTGTTCAATGCTTTTGCAACCGCTGCATTTTTC
AAGTTTGTTGTCTTCTCGATATTTGAGATGAGATATCTTCTCGCTATATGGAAGGCAAAT
AGACCTATGACTAGTGGAGAGGGCTGGCAAGCAATGAGACGTGAACTGTCAGTTCTGTAC
AGCCGCTTCTATGGGATCCTTTTAGGTGGAATTTTAATCATGTATGAATTCCATAGGTTT
CTGCGGCCACTCCTTTTCCTTTTACACTCTTTTTGGATACCTCAAATTGTAACTAACGTT
ATTCGTGACTCGAGAAAACCGTTGCATCCTCATTACATCTTGGGAATGACTGTTACTCGG
CTAGCAATTCCACTATATGTCTTTGGTTGTCCTCACAATTTTATGCGCATAGAGCCCGAC
AAAAGTTGGTGCATCTGTTTGGGAATTTTCATGGCAGTGCAGGCGTTAGTTCTTCTTTTG
CAGCACTATCTTGGATCTCGGTGGTTCATTCCACGACAGATTTTACCTGAAAAATATAGT
TATTACAGAAGATTTGACCAGAAAGGAAATCATGCTACTGACTGTGTCATTTGCATGACT
GCTATTGATCTCACTCAACGGTCAAATAATTGCATGGTGACGCCCTGTGATCATTTCTTT
CATTCGGGTTGTTTGCAAAGATGGATGGACATAAAGATGGAGTGCCCAACATGCCGACGT
CCTCTTCCTCCAGCCTGA