Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082782
CDS Infomation

pacid=37431505 polypeptide=PGSC0003DMP400055713 locus=PGSC0003DMG400032815 ID=PGSC0003DMT400082782.v4.03 annot-version=v4.03
Sequence

ATGTCTTTGAACACCTTCAAGGAGACGCTCAAGCCTTGTACCAATCAATCATTTTCACAA
TCTTCATCAACTTCTTACAATTTTGACACCAAATCTGTAAACCCTAGAAAACCCCCAAAA
TCTTCTTTGTCTCAGCAGCTTTTACGACTCGAAGATCACACTTCTCTGCTACAAAACCAA
CCCCAAACCCCCAAAAAGCAGAATCATTTTGATTTGAAGAGAAAATATGAAAAATCAGAG
GAGGAAGAAGTGGTAGAAGAAGAAGAAGAAAAGGGAATTGGGTTTGGGAGACCCAAGTTG
GATTCTTTATTGTTAGATCAAGCAGGACCGTATGAGCCGTTGGTTCTGTCTTCACTGGGT
GAAAAATCTCTTGTCCAGGTTCCAGCATCTATAAACTGTAGGCTTTTGGAGCATCAACGA
GAAGGAGTGAAATTTTTGTATAGCTTGTATCGGAATAATCACGGAGGAGTTCTTGGAGAT
GATATGGGACTTGGTAAGACCATCCAAAGCATCGCATTCTTAGCTGCTGTATATGGCAAG
GATGGAGATTTACCTGAATCATCAGTCTCGAAGGAACGCCGAAGAACAATGGGACCTGTA
CTAATAGTTTGTCCCTCTTCTTTGATCAACAACTGGGAAAATGAGTTTTCCAAGTGGGCA
ACATTTAGTGTTTGTATTTATCACGGGCCAAACCGTGATCTAATGATTGACAAACTAGAA
GCACGTGGAGTGGAGATACTTATAACCAGTTTTGATACATACAGAATCCATGGAAGAATT
TTATCAGCTATTGAATGGGAGATTGTGATTGTTGATGAGGCACATCGACTCAAGAATGAG
AAATCAAAACTGTACGAGGCATGTTTAGCAATAAAGACCCCAAAACGTTATGGTCTTACA
GGAACAATAATGCAGAACAGATTAATGGAATTGTTCAATCTGTTTGACTGGGTGATACCT
GGTTGCTTGGGGACACGTGACCACTTCCGAGAGTTTTATGAGGAGCCCCTTAAACATGGA
CAGAGATCAAGTGCTCCAGATAGATTTGTTCGAGTTGCTGATGAGCGGAAACAACACTTA
GTATCAGTTCTGCGCAAATATTTGTTAAGAAGGACAAAAGAGGAAACTATTGGACATCTC
ATGTTAGGGAAGGAAGATAATGTTGTTTTTTGTGCGATGAGCGAACTGCAAAAACGGGTT
TATCAGAGAATGCTACTGTTACCTGATGTACAATGCCTTATCAATAAGGATGTGCCTTGC
AGCTGTGGAAGCCCTCTCAAGCAAGTCGAATGTTGCAGGCGAACCGCTTCAGATGGTGTC
ATCTGGCCTTACCTTCACAGGGACAATCCAGATGGTTGTGATCACTGCCCTTTTTGCCTC
GTTCTTCCATGTCTCGTCAAGCTCCAGCAGATAAGCAACCATTTGGAACTTATCAAGCCT
AATCCAAGGGATGATCCAGATAAACAAAGAAGAGATGCAGAATTTGCTGCTGCTGTATTT
GGTGAGGACGTTGATTTGGTTGGAGGGAGTACTCAAAATAAGAGCTTCTTGGGCTTGAGT
AATGTTGAACATTGCGGGAAAATGAGAGCATTGGAGAAACTAATGTCCTCTTGGGTTTCA
CAAAGTGACAAGATTCTTCTTTTCAGCTATTCTGTAAGGATGCTGGACATACTTGAGAAA
TTTATTATACGCAAAGGCTATGGTTTTTCAAGACTTGATGGGTCCACCCCAACTGGCCTG
CGCCAGTCTCTAGTTGATGACTTCAACTCCAGTCCAAGCAAACAGGTATTCCTATTATCA
ACAAAAGCTGGTGGCCTTGGCCTCAACCTTGTTAGCGCGAATCGTGTAGTGATATTTGAT
CCAAACTGGAATCCTGCCCACGATCTGCAGGCCCAGGACAGGTCATTTCGATTTGGACAG
AAGCGGCATGTTATTGTTTTCCGCCTACTTGCTGCTGGTTCTCTTGAAGAACTTGTCTAC
ACTCGTCAGGTCTACAAACAGCAGTTATCAAACATTGCTGTCTCTGGAAATATGGAAAAA
CGCTATTTCGAGGGAGTTCAGGATAGCAAGGAGTTTCAAGGGGAGCTATTTGGAATATGC
AATCTTTTCAGAGATTTATCTGACAAGCTCTTCACAAGTGAGATCATTGAATTGCATGAA
AAGAACAGAAAAAAAAATGATGGAACTCACTCAAAGGAGGACTTGAATGTACGTGGGATG
TATTTTGTTCCTGAGAAAGAAATAACTACAGCATCTTTTGTGGAAGCTGAAAGCAGTAAA
CGTAAAGAAGAGGAATGCACAGCAGTTGCTCCAGCGCTTGAAGACCTTGGTATTGTATAT
GCTCATCGGTATGAAGACATTGTTAACCTTGGACCGGCAAAGATCAAAGAGAAGAAAGAA
CAGACCATACATTTAGATTACCCTCCGCGTCAACCAAAGATTTCAACTGCTGAGAAGAAG
AAATCAGATACCATAACTGGGAAGGAGAATGCAGGATCTGTCAATCCTATAATGATCCGC
AAAAAGAACCAGTACAGCCTACTTGCCCGTTCCATGGGTATGGAAGAAGTTCAGTTTAGC
AAATGGCTCTTATCTGCAACACCAGCAGAGCGCGAAAAAGTACTTAAAGACTATCGTAAG
AGAAAGGAGAAGATTCCGAATGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055713
PEP Infomation

pacid=37431505 transcript=PGSC0003DMT400082782 locus=PGSC0003DMG400032815 ID=PGSC0003DMT400082782.v4.03 annot-version=v4.03
Sequence

MSLNTFKETLKPCTNQSFSQSSSTSYNFDTKSVNPRKPPKSSLSQQLLRLEDHTSLLQNQ
PQTPKKQNHFDLKRKYEKSEEEEVVEEEEEKGIGFGRPKLDSLLLDQAGPYEPLVLSSLG
EKSLVQVPASINCRLLEHQREGVKFLYSLYRNNHGGVLGDDMGLGKTIQSIAFLAAVYGK
DGDLPESSVSKERRRTMGPVLIVCPSSLINNWENEFSKWATFSVCIYHGPNRDLMIDKLE
ARGVEILITSFDTYRIHGRILSAIEWEIVIVDEAHRLKNEKSKLYEACLAIKTPKRYGLT
GTIMQNRLMELFNLFDWVIPGCLGTRDHFREFYEEPLKHGQRSSAPDRFVRVADERKQHL
VSVLRKYLLRRTKEETIGHLMLGKEDNVVFCAMSELQKRVYQRMLLLPDVQCLINKDVPC
SCGSPLKQVECCRRTASDGVIWPYLHRDNPDGCDHCPFCLVLPCLVKLQQISNHLELIKP
NPRDDPDKQRRDAEFAAAVFGEDVDLVGGSTQNKSFLGLSNVEHCGKMRALEKLMSSWVS
QSDKILLFSYSVRMLDILEKFIIRKGYGFSRLDGSTPTGLRQSLVDDFNSSPSKQVFLLS
TKAGGLGLNLVSANRVVIFDPNWNPAHDLQAQDRSFRFGQKRHVIVFRLLAAGSLEELVY
TRQVYKQQLSNIAVSGNMEKRYFEGVQDSKEFQGELFGICNLFRDLSDKLFTSEIIELHE
KNRKKNDGTHSKEDLNVRGMYFVPEKEITTASFVEAESSKRKEEECTAVAPALEDLGIVY
AHRYEDIVNLGPAKIKEKKEQTIHLDYPPRQPKISTAEKKKSDTITGKENAGSVNPIMIR
KKNQYSLLARSMGMEEVQFSKWLLSATPAEREKVLKDYRKRKEKIPNG*

Transcript Sequence

Transcript ID

PGSC0003DMT400082782
Transcript Infomation

pacid=37431505 locus=PGSC0003DMG400032815 ID=PGSC0003DMT400082782.v4.03 annot-version=v4.03
Sequence

ATGTCTTTGAACACCTTCAAGGAGACGCTCAAGCCTTGTACCAATCAATCATTTTCACAA
TCTTCATCAACTTCTTACAATTTTGACACCAAATCTGTAAACCCTAGAAAACCCCCAAAA
TCTTCTTTGTCTCAGCAGCTTTTACGACTCGAAGATCACACTTCTCTGCTACAAAACCAA
CCCCAAACCCCCAAAAAGCAGAATCATTTTGATTTGAAGAGAAAATATGAAAAATCAGAG
GAGGAAGAAGTGGTAGAAGAAGAAGAAGAAAAGGGAATTGGGTTTGGGAGACCCAAGTTG
GATTCTTTATTGTTAGATCAAGCAGGACCGTATGAGCCGTTGGTTCTGTCTTCACTGGGT
GAAAAATCTCTTGTCCAGGTTCCAGCATCTATAAACTGTAGGCTTTTGGAGCATCAACGA
GAAGGAGTGAAATTTTTGTATAGCTTGTATCGGAATAATCACGGAGGAGTTCTTGGAGAT
GATATGGGACTTGGTAAGACCATCCAAAGCATCGCATTCTTAGCTGCTGTATATGGCAAG
GATGGAGATTTACCTGAATCATCAGTCTCGAAGGAACGCCGAAGAACAATGGGACCTGTA
CTAATAGTTTGTCCCTCTTCTTTGATCAACAACTGGGAAAATGAGTTTTCCAAGTGGGCA
ACATTTAGTGTTTGTATTTATCACGGGCCAAACCGTGATCTAATGATTGACAAACTAGAA
GCACGTGGAGTGGAGATACTTATAACCAGTTTTGATACATACAGAATCCATGGAAGAATT
TTATCAGCTATTGAATGGGAGATTGTGATTGTTGATGAGGCACATCGACTCAAGAATGAG
AAATCAAAACTGTACGAGGCATGTTTAGCAATAAAGACCCCAAAACGTTATGGTCTTACA
GGAACAATAATGCAGAACAGATTAATGGAATTGTTCAATCTGTTTGACTGGGTGATACCT
GGTTGCTTGGGGACACGTGACCACTTCCGAGAGTTTTATGAGGAGCCCCTTAAACATGGA
CAGAGATCAAGTGCTCCAGATAGATTTGTTCGAGTTGCTGATGAGCGGAAACAACACTTA
GTATCAGTTCTGCGCAAATATTTGTTAAGAAGGACAAAAGAGGAAACTATTGGACATCTC
ATGTTAGGGAAGGAAGATAATGTTGTTTTTTGTGCGATGAGCGAACTGCAAAAACGGGTT
TATCAGAGAATGCTACTGTTACCTGATGTACAATGCCTTATCAATAAGGATGTGCCTTGC
AGCTGTGGAAGCCCTCTCAAGCAAGTCGAATGTTGCAGGCGAACCGCTTCAGATGGTGTC
ATCTGGCCTTACCTTCACAGGGACAATCCAGATGGTTGTGATCACTGCCCTTTTTGCCTC
GTTCTTCCATGTCTCGTCAAGCTCCAGCAGATAAGCAACCATTTGGAACTTATCAAGCCT
AATCCAAGGGATGATCCAGATAAACAAAGAAGAGATGCAGAATTTGCTGCTGCTGTATTT
GGTGAGGACGTTGATTTGGTTGGAGGGAGTACTCAAAATAAGAGCTTCTTGGGCTTGAGT
AATGTTGAACATTGCGGGAAAATGAGAGCATTGGAGAAACTAATGTCCTCTTGGGTTTCA
CAAAGTGACAAGATTCTTCTTTTCAGCTATTCTGTAAGGATGCTGGACATACTTGAGAAA
TTTATTATACGCAAAGGCTATGGTTTTTCAAGACTTGATGGGTCCACCCCAACTGGCCTG
CGCCAGTCTCTAGTTGATGACTTCAACTCCAGTCCAAGCAAACAGGTATTCCTATTATCA
ACAAAAGCTGGTGGCCTTGGCCTCAACCTTGTTAGCGCGAATCGTGTAGTGATATTTGAT
CCAAACTGGAATCCTGCCCACGATCTGCAGGCCCAGGACAGGTCATTTCGATTTGGACAG
AAGCGGCATGTTATTGTTTTCCGCCTACTTGCTGCTGGTTCTCTTGAAGAACTTGTCTAC
ACTCGTCAGGTCTACAAACAGCAGTTATCAAACATTGCTGTCTCTGGAAATATGGAAAAA
CGCTATTTCGAGGGAGTTCAGGATAGCAAGGAGTTTCAAGGGGAGCTATTTGGAATATGC
AATCTTTTCAGAGATTTATCTGACAAGCTCTTCACAAGTGAGATCATTGAATTGCATGAA
AAGAACAGAAAAAAAAATGATGGAACTCACTCAAAGGAGGACTTGAATGTACGTGGGATG
TATTTTGTTCCTGAGAAAGAAATAACTACAGCATCTTTTGTGGAAGCTGAAAGCAGTAAA
CGTAAAGAAGAGGAATGCACAGCAGTTGCTCCAGCGCTTGAAGACCTTGGTATTGTATAT
GCTCATCGGTATGAAGACATTGTTAACCTTGGACCGGCAAAGATCAAAGAGAAGAAAGAA
CAGACCATACATTTAGATTACCCTCCGCGTCAACCAAAGATTTCAACTGCTGAGAAGAAG
AAATCAGATACCATAACTGGGAAGGAGAATGCAGGATCTGTCAATCCTATAATGATCCGC
AAAAAGAACCAGTACAGCCTACTTGCCCGTTCCATGGGTATGGAAGAAGTTCAGTTTAGC
AAATGGCTCTTATCTGCAACACCAGCAGAGCGCGAAAAAGTACTTAAAGACTATCGTAAG
AGAAAGGAGAAGATTCCGAATGGCTGA