Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082749
CDS Infomation

pacid=37431291 polypeptide=PGSC0003DMP400055692 locus=PGSC0003DMG400032792 ID=PGSC0003DMT400082749.v4.03 annot-version=v4.03
Sequence

ATGACAGTGATAAGAACAAACAGTTTTAAAGGAAGAGAGTCAGAAACCATCACGACGAAG
AAGAAGAATTCGATAAATGTAACAAATTGCGAGCCTCTAAAACTTATGCTACAGACAACA
CTGTCATTCAAAAATCTGGTTCAAGTTCAAGATTCTGTTGTCGCCCTTCCTGAACCTGCT
ATCATATTTTCACCACGACCTGTTTGCGAACTCGATGCTGCAGCTGTTAAGCTTCAAAAA
GTATACAAGAGTTACAGGACTAGAAGAAATCTAGCTGATTGTGCTGTTGTTGTAGAAGAA
TTATGGTGGAAGGCATTAGATTTTGCAGCTTTGAAGAGAAGTTCTGTTTCATTTTTCAAC
GTTGAAAAGCCGGAAACTGCTGTTTCTCGATGGGCTAGAGCACGTACAAGAGCTGCTAAG
GTTGGAAAAGGATTGTCCAAGGATGAAAAGGCTCAAAAATTGGCTCTGCAGCATTGGCTA
GAAGCTATTGATCCACGACACCGATATGGCCATAACTTGCACTTTTATTATGATTTGTGG
TTTTTGAGCGAAAGCTCTCAGCCTTTCTTCTACTGGTTGGACGTTGGAGATGGGAAAGAA
ATAAACCTCGAGAAATGTCCAAGGACAAAATTGCACCATCAATGCATCAAGTATCTCGGA
CCAAAGGAGCGCGAATCATATGAAGTAGTCATTGAGAATGGGAAGCTTGTATATAAACAA
AGTGGTGTATTAGTTCAGTCAGTAGAGGGTTCAAAGTCGATATTTGTTCTTAGCACAACA
AGAACATTGTATGTAGGAAAGAAGCAAAAGGGCACATTTCAACATTCGAGTTTTCTATCA
GGTGGTGCTATCACAGCTGCTGGAAGACTAGTTGCTCATTCTGGAATTCTGGAGGCTATT
TGGCCATACAGTGGTCATTATCACCCAACTGAAGAGAACTTCAAGGAGTTCATTAACTTT
CTTGAAGAGCACAAAGTTGATCTTACAAATGTTAAGAGATGTGCAGTTGATGACGACAAT
CTATCAGAGGCGTCAAACAGCCAACCATCTGTTGATCTTTCAATTGTTGAAGAATCTGAA
GAAAGAAGCACATCGAAATCCAAGAAACCAGAGGATATCATCATCAATAAGAAAGCACAA
GCATTTAGCTTCTCCAAACATTTGTCTAGCAAATGGACAAGTGGAACTGGACCTCGTATT
GGCTGCGTTAGGGATTACCCTACAGAACTACAATTCCGAGCACTTGAACAAGTTAATTTG
TCGCCTCGGGTGGTCAATGGAGGCTTCAACTTCTCTGGTCCAATCCCCTCACCAAGGCCA
AGCCCAAACATTAGGCTATCACCTAGAATTGCACATATGGGACTACCGAGTCCCCGGACA
CCAATTTCTGTGCCTAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400055692
PEP Infomation

pacid=37431291 transcript=PGSC0003DMT400082749 locus=PGSC0003DMG400032792 ID=PGSC0003DMT400082749.v4.03 annot-version=v4.03
Sequence

MTVIRTNSFKGRESETITTKKKNSINVTNCEPLKLMLQTTLSFKNLVQVQDSVVALPEPA
IIFSPRPVCELDAAAVKLQKVYKSYRTRRNLADCAVVVEELWWKALDFAALKRSSVSFFN
VEKPETAVSRWARARTRAAKVGKGLSKDEKAQKLALQHWLEAIDPRHRYGHNLHFYYDLW
FLSESSQPFFYWLDVGDGKEINLEKCPRTKLHHQCIKYLGPKERESYEVVIENGKLVYKQ
SGVLVQSVEGSKSIFVLSTTRTLYVGKKQKGTFQHSSFLSGGAITAAGRLVAHSGILEAI
WPYSGHYHPTEENFKEFINFLEEHKVDLTNVKRCAVDDDNLSEASNSQPSVDLSIVEESE
ERSTSKSKKPEDIIINKKAQAFSFSKHLSSKWTSGTGPRIGCVRDYPTELQFRALEQVNL
SPRVVNGGFNFSGPIPSPRPSPNIRLSPRIAHMGLPSPRTPISVPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400082749
Transcript Infomation

pacid=37431291 locus=PGSC0003DMG400032792 ID=PGSC0003DMT400082749.v4.03 annot-version=v4.03
Sequence

ATGACAGTGATAAGAACAAACAGTTTTAAAGGAAGAGAGTCAGAAACCATCACGACGAAG
AAGAAGAATTCGATAAATGTAACAAATTGCGAGCCTCTAAAACTTATGCTACAGACAACA
CTGTCATTCAAAAATCTGGTTCAAGTTCAAGATTCTGTTGTCGCCCTTCCTGAACCTGCT
ATCATATTTTCACCACGACCTGTTTGCGAACTCGATGCTGCAGCTGTTAAGCTTCAAAAA
GTATACAAGAGTTACAGGACTAGAAGAAATCTAGCTGATTGTGCTGTTGTTGTAGAAGAA
TTATGGTGGAAGGCATTAGATTTTGCAGCTTTGAAGAGAAGTTCTGTTTCATTTTTCAAC
GTTGAAAAGCCGGAAACTGCTGTTTCTCGATGGGCTAGAGCACGTACAAGAGCTGCTAAG
GTTGGAAAAGGATTGTCCAAGGATGAAAAGGCTCAAAAATTGGCTCTGCAGCATTGGCTA
GAAGCTATTGATCCACGACACCGATATGGCCATAACTTGCACTTTTATTATGATTTGTGG
TTTTTGAGCGAAAGCTCTCAGCCTTTCTTCTACTGGTTGGACGTTGGAGATGGGAAAGAA
ATAAACCTCGAGAAATGTCCAAGGACAAAATTGCACCATCAATGCATCAAGTATCTCGGA
CCAAAGGAGCGCGAATCATATGAAGTAGTCATTGAGAATGGGAAGCTTGTATATAAACAA
AGTGGTGTATTAGTTCAGTCAGTAGAGGGTTCAAAGTCGATATTTGTTCTTAGCACAACA
AGAACATTGTATGTAGGAAAGAAGCAAAAGGGCACATTTCAACATTCGAGTTTTCTATCA
GGTGGTGCTATCACAGCTGCTGGAAGACTAGTTGCTCATTCTGGAATTCTGGAGGCTATT
TGGCCATACAGTGGTCATTATCACCCAACTGAAGAGAACTTCAAGGAGTTCATTAACTTT
CTTGAAGAGCACAAAGTTGATCTTACAAATGTTAAGAGATGTGCAGTTGATGACGACAAT
CTATCAGAGGCGTCAAACAGCCAACCATCTGTTGATCTTTCAATTGTTGAAGAATCTGAA
GAAAGAAGCACATCGAAATCCAAGAAACCAGAGGATATCATCATCAATAAGAAAGCACAA
GCATTTAGCTTCTCCAAACATTTGTCTAGCAAATGGACAAGTGGAACTGGACCTCGTATT
GGCTGCGTTAGGGATTACCCTACAGAACTACAATTCCGAGCACTTGAACAAGTTAATTTG
TCGCCTCGGGTGGTCAATGGAGGCTTCAACTTCTCTGGTCCAATCCCCTCACCAAGGCCA
AGCCCAAACATTAGGCTATCACCTAGAATTGCACATATGGGACTACCGAGTCCCCGGACA
CCAATTTCTGTGCCTAGATAA