Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082739
CDS Infomation

pacid=37432453 polypeptide=PGSC0003DMP400055685 locus=PGSC0003DMG400032788 ID=PGSC0003DMT400082739.v4.03 annot-version=v4.03
Sequence

ATGGAATTGCTGAAAAATCAAGGAGCCACCGCCACGGCAACGGCAACGGCGTCGGGTATT
GAATCCGATCTTATTCGGAGAAGACGTGGTAGTAATGGTTTTGAGCAGGCTAATGCAATC
AACGGTGCAGATGTGAATACTACTGATGATGTATGTGGCAGCGGTGCTGGATTTGAAACG
ATGAATGAGCCGACTAAATCGGTTGGTGAATCCAATCCAAGGGAAGAGGAGGACAGGAAC
GATGCTGTTGCCAATGGAGACGAAAGAAAAACAACCGAAGCAACAACTGCCTATAAATTT
TCTTACAGGGCGTCCGCGCCAGCTCACCGACGAATCAGGGAGAGTCCTCTTAGCTCCGAC
GCCATTTTCAGACAGAGTCACGCAGGCTTGTTCAATCTCTGTGTGGTGGTGCTGATTGCT
GTTAACAGCAGGTTGATTATTGAGAATTTGATGAAGTATGGCCTGTTAATTAGGGCTGGC
TTTTGGTTTAGTTCAAAGTCTTTAAGGGATTGGCCGCTTCTAATGTGCTGTCTCATTCTC
CAACTTTTGCCTCTGACTGCTTTCCTTGTGGAGAAGATGGCACAGAAGAGGCGTTTGACT
GAGCGTGTGGTGGTCATTCTTCACATAACTATAACAACAGTTGCCATTTTGTATCCAGTT
TTGGTCATTCTCAAGTGTGATTCTGCTTTTCTGTCTGGTGTCATATTGATGCTCGTTGCT
TGTATTGTGTGGATGAAGCTGGTTTCTTATGCACATACAAATCACGATATGAGAGTACTT
GCAAAGTCTATGGATAAGGTTGAAACTTCAGATGCGGATTACTCTTATGATGTTAGCTTC
AAGAGTTTAGCTTACTTCATGGTTGCTCCAACATTATGTTATCAGCTATCCCCGCACTCC
ATGCATTCGCAAAGGTTGGGTGGCCCGACAATTCATCAAGCTGGTAATATTTACAGGATT
GATGGGATTTATCATAGAACAGTACATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055685
PEP Infomation

pacid=37432453 transcript=PGSC0003DMT400082739 locus=PGSC0003DMG400032788 ID=PGSC0003DMT400082739.v4.03 annot-version=v4.03
Sequence

MELLKNQGATATATATASGIESDLIRRRRGSNGFEQANAINGADVNTTDDVCGSGAGFET
MNEPTKSVGESNPREEEDRNDAVANGDERKTTEATTAYKFSYRASAPAHRRIRESPLSSD
AIFRQSHAGLFNLCVVVLIAVNSRLIIENLMKYGLLIRAGFWFSSKSLRDWPLLMCCLIL
QLLPLTAFLVEKMAQKRRLTERVVVILHITITTVAILYPVLVILKCDSAFLSGVILMLVA
CIVWMKLVSYAHTNHDMRVLAKSMDKVETSDADYSYDVSFKSLAYFMVAPTLCYQLSPHS
MHSQRLGGPTIHQAGNIYRIDGIYHRTVH*

Transcript Sequence

Transcript ID

PGSC0003DMT400082739
Transcript Infomation

pacid=37432453 locus=PGSC0003DMG400032788 ID=PGSC0003DMT400082739.v4.03 annot-version=v4.03
Sequence

ATGGAATTGCTGAAAAATCAAGGAGCCACCGCCACGGCAACGGCAACGGCGTCGGGTATT
GAATCCGATCTTATTCGGAGAAGACGTGGTAGTAATGGTTTTGAGCAGGCTAATGCAATC
AACGGTGCAGATGTGAATACTACTGATGATGTATGTGGCAGCGGTGCTGGATTTGAAACG
ATGAATGAGCCGACTAAATCGGTTGGTGAATCCAATCCAAGGGAAGAGGAGGACAGGAAC
GATGCTGTTGCCAATGGAGACGAAAGAAAAACAACCGAAGCAACAACTGCCTATAAATTT
TCTTACAGGGCGTCCGCGCCAGCTCACCGACGAATCAGGGAGAGTCCTCTTAGCTCCGAC
GCCATTTTCAGACAGAGTCACGCAGGCTTGTTCAATCTCTGTGTGGTGGTGCTGATTGCT
GTTAACAGCAGGTTGATTATTGAGAATTTGATGAAGTATGGCCTGTTAATTAGGGCTGGC
TTTTGGTTTAGTTCAAAGTCTTTAAGGGATTGGCCGCTTCTAATGTGCTGTCTCATTCTC
CAACTTTTGCCTCTGACTGCTTTCCTTGTGGAGAAGATGGCACAGAAGAGGCGTTTGACT
GAGCGTGTGGTGGTCATTCTTCACATAACTATAACAACAGTTGCCATTTTGTATCCAGTT
TTGGTCATTCTCAAGTGTGATTCTGCTTTTCTGTCTGGTGTCATATTGATGCTCGTTGCT
TGTATTGTGTGGATGAAGCTGGTTTCTTATGCACATACAAATCACGATATGAGAGTACTT
GCAAAGTCTATGGATAAGGTTGAAACTTCAGATGCGGATTACTCTTATGATGTTAGCTTC
AAGAGTTTAGCTTACTTCATGGTTGCTCCAACATTATGTTATCAGCTATCCCCGCACTCC
ATGCATTCGCAAAGGTTGGGTGGCCCGACAATTCATCAAGCTGGTAATATTTACAGGATT
GATGGGATTTATCATAGAACAGTACATTAA