Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082714
CDS Infomation

pacid=37468297 polypeptide=PGSC0003DMP400055667 locus=PGSC0003DMG400032778 ID=PGSC0003DMT400082714.v4.03 annot-version=v4.03
Sequence

ATGGCGGTGACTAGGAAGTATAAGGTGAAAATGAGGCCATTGAAGTTAGAATTAGGAGTT
GATGATTTGGATAAGGAAAATCAAGAATCAAGAAAGGTGAAGATGATGACAATAGAGATG
AAATGGAAAGGAGAATCCAAGTTTGGTTTAGTCCAATTTTATAAATATAAGAAAGATTTC
ACAAGTCGGAGATTTATGAAAGACAATTCTGTTAAATGGGATAATGATGCAGATGAGTTT
GAGAATGTTTGTTGCTTTACAGAGGTTTCTGGTTGTTATCAGAGTCTAAAATATTCGCCC
TGGGATGTTTCTTTTAATGTCTTGTACGCAACTAGTTTTGAGAAAATGGTGGTGATTGGG
AAAGTGGTTGTTAATGTAGCTGAATTGGCTGCGAGAAGGATGTGTCTTGTTGAAGAGAAG
CTTCCAATAACTTTAAATATTGGTAAAACTTCCGTATCAGCTATCCTCCATGTCAACATT
ACATTTGGTGAGATGAAAGAGTCGGTAGGCTGTGTCCGTGACTGGAACGAGTCGAGACAG
CTGCAATGTTTAGCAAAGAGTAGTAGCGTATGTGACAGAAAGGGATACAAGCTGAGTCAA
GAAGATGAGTCATCTACATTTGAAGCAGAGGTACCGAAGGCAATTGAGTCGAGTTCAGAA
ACTCAGCCTGTCTTAGTCAAGAAAGTTGGGTGGTTCTCTTGGAAGAGAAGGCGATTAAGT
CTGAGACCTATCAGACCGAGTAAAGAAGAAGCATTGATTAAGAGGACTTGTAGCTTTGGT
GTTGACTCACGACTCAATCAACAGATTGTAGAGAAGGCTGAACCTTCTGCTGAATCAAGC
CACCAAAATGAGCCTGCTTGGGAAGTAAAGGAATTACAGAGTAGGGATAGGCAAACGAAG
CTCAAAACCGAGGTCTTCTTTGCATCTTTCGACCAATGCAGCGATAAGGCTGCTGGAGAG
AGTGCATGCACAGCACTAGTAGCTGTTATCTCCCATTGGCTGCAATCGAATAGAGTTGCA
ATGCCCACGAGACCAGAATTTGATAACCTCATACTACAAGGTTCCACGGAATGGAGAAAA
CTATGCCAAAATGATACTTACATCAATGATTTCCCAAACAAGCACTTTGATTTAGAGACT
GTCCTGCATGCTGGTATTCGACCTTTATCCATCTCGCATGATCAATCATTTGTTGGATTC
TTCATCCCGGAGAAATTTGACTCATTACAAGGGGTAATGTCATTTGATCAGATATGGGAC
AAGATTAGTAGTGTCACAGATGGTATTGAATTTGAACCTAGAGTTTATATTATAAGTTGG
AACGATCATTTCTTCGTATTGAAGGTGGAAGAAAATGCTTATTACATTATTGATACATTG
GGAGAAAGGCTATATGAGGGTTGCAGCAAAGCATATATTTTAAGGTTTGACGATAACACA
ATGATATATGAGAATGTTGCAGAAGAGAAGTCACAGAAAAATGATACTAAGGATAAGGAA
GAGATGATATGCAAGGGGAAAGAATGCTGCAGAGAATTCATCAAGAGATTCCTCGCGGCT
ATCCCTCTAAAGGAACTGGAGGAGCAAGAGAAAAAGGAGACAATTTCTTATGTATCACTT
CATCATCGATTGCAGATAGAGTTCAACTTGAGCTACTTGTTGTCTTCTTCGTCATCGTCT
TTGACATCATCACCTTTTTCTTCTTCTTCTACTACTTCTACACTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400055667
PEP Infomation

pacid=37468297 transcript=PGSC0003DMT400082714 locus=PGSC0003DMG400032778 ID=PGSC0003DMT400082714.v4.03 annot-version=v4.03
Sequence

MAVTRKYKVKMRPLKLELGVDDLDKENQESRKVKMMTIEMKWKGESKFGLVQFYKYKKDF
TSRRFMKDNSVKWDNDADEFENVCCFTEVSGCYQSLKYSPWDVSFNVLYATSFEKMVVIG
KVVVNVAELAARRMCLVEEKLPITLNIGKTSVSAILHVNITFGEMKESVGCVRDWNESRQ
LQCLAKSSSVCDRKGYKLSQEDESSTFEAEVPKAIESSSETQPVLVKKVGWFSWKRRRLS
LRPIRPSKEEALIKRTCSFGVDSRLNQQIVEKAEPSAESSHQNEPAWEVKELQSRDRQTK
LKTEVFFASFDQCSDKAAGESACTALVAVISHWLQSNRVAMPTRPEFDNLILQGSTEWRK
LCQNDTYINDFPNKHFDLETVLHAGIRPLSISHDQSFVGFFIPEKFDSLQGVMSFDQIWD
KISSVTDGIEFEPRVYIISWNDHFFVLKVEENAYYIIDTLGERLYEGCSKAYILRFDDNT
MIYENVAEEKSQKNDTKDKEEMICKGKECCREFIKRFLAAIPLKELEEQEKKETISYVSL
HHRLQIEFNLSYLLSSSSSSLTSSPFSSSSTTSTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400082714
Transcript Infomation

pacid=37468297 locus=PGSC0003DMG400032778 ID=PGSC0003DMT400082714.v4.03 annot-version=v4.03
Sequence

ATGGCGGTGACTAGGAAGTATAAGGTGAAAATGAGGCCATTGAAGTTAGAATTAGGAGTT
GATGATTTGGATAAGGAAAATCAAGAATCAAGAAAGGTGAAGATGATGACAATAGAGATG
AAATGGAAAGGAGAATCCAAGTTTGGTTTAGTCCAATTTTATAAATATAAGAAAGATTTC
ACAAGTCGGAGATTTATGAAAGACAATTCTGTTAAATGGGATAATGATGCAGATGAGTTT
GAGAATGTTTGTTGCTTTACAGAGGTTTCTGGTTGTTATCAGAGTCTAAAATATTCGCCC
TGGGATGTTTCTTTTAATGTCTTGTACGCAACTAGTTTTGAGAAAATGGTGGTGATTGGG
AAAGTGGTTGTTAATGTAGCTGAATTGGCTGCGAGAAGGATGTGTCTTGTTGAAGAGAAG
CTTCCAATAACTTTAAATATTGGTAAAACTTCCGTATCAGCTATCCTCCATGTCAACATT
ACATTTGGTGAGATGAAAGAGTCGGTAGGCTGTGTCCGTGACTGGAACGAGTCGAGACAG
CTGCAATGTTTAGCAAAGAGTAGTAGCGTATGTGACAGAAAGGGATACAAGCTGAGTCAA
GAAGATGAGTCATCTACATTTGAAGCAGAGGTACCGAAGGCAATTGAGTCGAGTTCAGAA
ACTCAGCCTGTCTTAGTCAAGAAAGTTGGGTGGTTCTCTTGGAAGAGAAGGCGATTAAGT
CTGAGACCTATCAGACCGAGTAAAGAAGAAGCATTGATTAAGAGGACTTGTAGCTTTGGT
GTTGACTCACGACTCAATCAACAGATTGTAGAGAAGGCTGAACCTTCTGCTGAATCAAGC
CACCAAAATGAGCCTGCTTGGGAAGTAAAGGAATTACAGAGTAGGGATAGGCAAACGAAG
CTCAAAACCGAGGTCTTCTTTGCATCTTTCGACCAATGCAGCGATAAGGCTGCTGGAGAG
AGTGCATGCACAGCACTAGTAGCTGTTATCTCCCATTGGCTGCAATCGAATAGAGTTGCA
ATGCCCACGAGACCAGAATTTGATAACCTCATACTACAAGGTTCCACGGAATGGAGAAAA
CTATGCCAAAATGATACTTACATCAATGATTTCCCAAACAAGCACTTTGATTTAGAGACT
GTCCTGCATGCTGGTATTCGACCTTTATCCATCTCGCATGATCAATCATTTGTTGGATTC
TTCATCCCGGAGAAATTTGACTCATTACAAGGGGTAATGTCATTTGATCAGATATGGGAC
AAGATTAGTAGTGTCACAGATGGTATTGAATTTGAACCTAGAGTTTATATTATAAGTTGG
AACGATCATTTCTTCGTATTGAAGGTGGAAGAAAATGCTTATTACATTATTGATACATTG
GGAGAAAGGCTATATGAGGGTTGCAGCAAAGCATATATTTTAAGGTTTGACGATAACACA
ATGATATATGAGAATGTTGCAGAAGAGAAGTCACAGAAAAATGATACTAAGGATAAGGAA
GAGATGATATGCAAGGGGAAAGAATGCTGCAGAGAATTCATCAAGAGATTCCTCGCGGCT
ATCCCTCTAAAGGAACTGGAGGAGCAAGAGAAAAAGGAGACAATTTCTTATGTATCACTT
CATCATCGATTGCAGATAGAGTTCAACTTGAGCTACTTGTTGTCTTCTTCGTCATCGTCT
TTGACATCATCACCTTTTTCTTCTTCTTCTACTACTTCTACACTTTAG