Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082507
CDS Infomation

pacid=37475298 polypeptide=PGSC0003DMP400055644 locus=PGSC0003DMG400032584 ID=PGSC0003DMT400082507.v4.03 annot-version=v4.03
Sequence

ATGGATATCTCTCGCAAACGAGAGACTTATGGTGTTACAAATATCAATAGTAATGCAGGA
GAAGGGCCAAGTAATCAGATTATAACATTGAGGAGAACTACCTCATATGTGGATGACCAG
GATTACATTTTTGTTGGCTTTCAGGATGTTGTACAAACATTGCTAGCTCAACTTATCAAA
GCAGAGCCTCGTCGAACCGTCCTCTCCATTTATGGCATGGGCGGATTAGGCAAGACCACT
CTTGCAAGAAACCTCTACACCAGTCCTAATATAATCTCAAGCTTCCCTACACGCGCTTGG
ATATGTGTTTCTCAAGAGTACAACACAATGGATCTTCTTAGGAATATCATAAAATCCATC
CAAGGTCGCACCAAGGAAACTCTAGATTTGTTGGAAAGGATGACAGAAGGAGATCTAGAA
ATTTATCTTCGTGATCTACTAAAAGAACGCAAATACCTTGTGGTGGTTGATGATGTATGG
CAGAAAGAAGCATGGGAGAGTTTGAAAAGAGCATTCCCGGATAGCAAGAATGGCAGCAGA
GTCATTATTACCACGCGCAAAGAGGAAGTCGCTGAAAGAGCAGACAACATAAGTTTTGTT
CATAAACTTCGTTTCCTAAGTCAAGAAGAAAGTTGGGATCTCTTTTGTAGGAAACTACTT
GATGTTCGAGCAATGATTCCAGCAATGGAAAGTCTAGCTAAGGATATGGTGGAAAAGTGT
AGAGGCTTACCTCTTGCAATTGTTGTATTGAGCGGACTACTTTCGCATAAAAAGGGGCTA
AACGAATGGCAAAAGGTGAAAGACTGCCTTTGGAAGAACATTATTGAAGATAAATCTATT
GAAATCTTCAGCATACTATCATTAAGCTTCAATGATTTGTCAGTTGCGCTCAAGCAGTGT
TTTCTGTACATTGGTATTTTTCCAGAAGATCAAGTGATCGATGCTGAAGACATAATACGT
TTGTGGATGGCAGAGGGTTTCATCATACCCAGAGGAGAAGAAAGAATGGAGGATGTCGCT
GAAGACTTCTTGAATGAGCTGATAAGACGAAGCTTGGTTCAAGTGGCAAAAATATTTTTG
GAAAAAGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400055644
PEP Infomation

pacid=37475298 transcript=PGSC0003DMT400082507 locus=PGSC0003DMG400032584 ID=PGSC0003DMT400082507.v4.03 annot-version=v4.03
Sequence

MDISRKRETYGVTNINSNAGEGPSNQIITLRRTTSYVDDQDYIFVGFQDVVQTLLAQLIK
AEPRRTVLSIYGMGGLGKTTLARNLYTSPNIISSFPTRAWICVSQEYNTMDLLRNIIKSI
QGRTKETLDLLERMTEGDLEIYLRDLLKERKYLVVVDDVWQKEAWESLKRAFPDSKNGSR
VIITTRKEEVAERADNISFVHKLRFLSQEESWDLFCRKLLDVRAMIPAMESLAKDMVEKC
RGLPLAIVVLSGLLSHKKGLNEWQKVKDCLWKNIIEDKSIEIFSILSLSFNDLSVALKQC
FLYIGIFPEDQVIDAEDIIRLWMAEGFIIPRGEERMEDVAEDFLNELIRRSLVQVAKIFL
EKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400082507
Transcript Infomation

pacid=37475298 locus=PGSC0003DMG400032584 ID=PGSC0003DMT400082507.v4.03 annot-version=v4.03
Sequence

ATGGATATCTCTCGCAAACGAGAGACTTATGGTGTTACAAATATCAATAGTAATGCAGGA
GAAGGGCCAAGTAATCAGATTATAACATTGAGGAGAACTACCTCATATGTGGATGACCAG
GATTACATTTTTGTTGGCTTTCAGGATGTTGTACAAACATTGCTAGCTCAACTTATCAAA
GCAGAGCCTCGTCGAACCGTCCTCTCCATTTATGGCATGGGCGGATTAGGCAAGACCACT
CTTGCAAGAAACCTCTACACCAGTCCTAATATAATCTCAAGCTTCCCTACACGCGCTTGG
ATATGTGTTTCTCAAGAGTACAACACAATGGATCTTCTTAGGAATATCATAAAATCCATC
CAAGGTCGCACCAAGGAAACTCTAGATTTGTTGGAAAGGATGACAGAAGGAGATCTAGAA
ATTTATCTTCGTGATCTACTAAAAGAACGCAAATACCTTGTGGTGGTTGATGATGTATGG
CAGAAAGAAGCATGGGAGAGTTTGAAAAGAGCATTCCCGGATAGCAAGAATGGCAGCAGA
GTCATTATTACCACGCGCAAAGAGGAAGTCGCTGAAAGAGCAGACAACATAAGTTTTGTT
CATAAACTTCGTTTCCTAAGTCAAGAAGAAAGTTGGGATCTCTTTTGTAGGAAACTACTT
GATGTTCGAGCAATGATTCCAGCAATGGAAAGTCTAGCTAAGGATATGGTGGAAAAGTGT
AGAGGCTTACCTCTTGCAATTGTTGTATTGAGCGGACTACTTTCGCATAAAAAGGGGCTA
AACGAATGGCAAAAGGTGAAAGACTGCCTTTGGAAGAACATTATTGAAGATAAATCTATT
GAAATCTTCAGCATACTATCATTAAGCTTCAATGATTTGTCAGTTGCGCTCAAGCAGTGT
TTTCTGTACATTGGTATTTTTCCAGAAGATCAAGTGATCGATGCTGAAGACATAATACGT
TTGTGGATGGCAGAGGGTTTCATCATACCCAGAGGAGAAGAAAGAATGGAGGATGTCGCT
GAAGACTTCTTGAATGAGCTGATAAGACGAAGCTTGGTTCAAGTGGCAAAAATATTTTTG
GAAAAAGTGTAG