Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082479
CDS Infomation

pacid=37472129 polypeptide=PGSC0003DMP400055625 locus=PGSC0003DMG400032560 ID=PGSC0003DMT400082479.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAAATCTCTAAAACCTCCAAAACAACCACCAAAAAACCCTAAAAAACAATGG
TCCCTCAACGATTTCGAGATCGGAAAACCCCTCGGAAAAGGCAAATTCGGCCGTGTATAC
CTCGCCCGCGAAGTTAAGAGTGGATTTATAGTGGCGTTGAAGGTGATATTCAAGGAGCAA
ATAGAGAAATACAGGTTGCATCATCAGCTTAAGAGGGAAATGGAGATTCAAACAAGTCTT
CGTCATCCCAATGTACTGAGGCTATATGGTTGGTTTCACGATGAGGAGCGGATTTACTTG
ATTTTGGAGTATGCTCATGGCGGTGAGCTGTATAGGGAGCTAAGGAAGACCGGTCGCCTG
TCTGAGAAACAAGCTGCCATATATATTGCAAGTCTCACACAAGCACTGGCGTACTGTCAT
GAGAAGCATGTTATTCACAGGGACATAAAGCCGGAAAACCTGTTACTTGATCATGAGGGT
CGCTTAAAGATTGCAGACTTTGGGTGGTCTGTACAATCTAGAAGCAAGAGACATACAATG
TGCGGAACTCTGGACTATCTGGCACCAGAAATGGTGGAGAACAAAGCTCATGATTATGCA
GTTGACAATTGGACCCTGGGGATCCTTTGCTATGAATTTTTATATGGTGTTCCTCCATTT
GAGGCCGAGAGACAGACTGACACATTCAGAAGAATTATGAAGGTAGACCTCAGCTTCCCT
TCAACACCTGATGTATCTGCTGAAGCTAAGGATCTCATTAGCCAGCTTCTTGTGAAGGAC
TCTTCTAAAAGGCTCTCTCTTCAAAAGATCATGGAGCACCCTTGGGTAATTAAGAATGTC
ACATCACATGACACTATAATCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055625
PEP Infomation

pacid=37472129 transcript=PGSC0003DMT400082479 locus=PGSC0003DMG400032560 ID=PGSC0003DMT400082479.v4.03 annot-version=v4.03
Sequence

MASKSLKPPKQPPKNPKKQWSLNDFEIGKPLGKGKFGRVYLAREVKSGFIVALKVIFKEQ
IEKYRLHHQLKREMEIQTSLRHPNVLRLYGWFHDEERIYLILEYAHGGELYRELRKTGRL
SEKQAAIYIASLTQALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTM
CGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGVPPFEAERQTDTFRRIMKVDLSFP
STPDVSAEAKDLISQLLVKDSSKRLSLQKIMEHPWVIKNVTSHDTII*

Transcript Sequence

Transcript ID

PGSC0003DMT400082479
Transcript Infomation

pacid=37472129 locus=PGSC0003DMG400032560 ID=PGSC0003DMT400082479.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAAATCTCTAAAACCTCCAAAACAACCACCAAAAAACCCTAAAAAACAATGG
TCCCTCAACGATTTCGAGATCGGAAAACCCCTCGGAAAAGGCAAATTCGGCCGTGTATAC
CTCGCCCGCGAAGTTAAGAGTGGATTTATAGTGGCGTTGAAGGTGATATTCAAGGAGCAA
ATAGAGAAATACAGGTTGCATCATCAGCTTAAGAGGGAAATGGAGATTCAAACAAGTCTT
CGTCATCCCAATGTACTGAGGCTATATGGTTGGTTTCACGATGAGGAGCGGATTTACTTG
ATTTTGGAGTATGCTCATGGCGGTGAGCTGTATAGGGAGCTAAGGAAGACCGGTCGCCTG
TCTGAGAAACAAGCTGCCATATATATTGCAAGTCTCACACAAGCACTGGCGTACTGTCAT
GAGAAGCATGTTATTCACAGGGACATAAAGCCGGAAAACCTGTTACTTGATCATGAGGGT
CGCTTAAAGATTGCAGACTTTGGGTGGTCTGTACAATCTAGAAGCAAGAGACATACAATG
TGCGGAACTCTGGACTATCTGGCACCAGAAATGGTGGAGAACAAAGCTCATGATTATGCA
GTTGACAATTGGACCCTGGGGATCCTTTGCTATGAATTTTTATATGGTGTTCCTCCATTT
GAGGCCGAGAGACAGACTGACACATTCAGAAGAATTATGAAGGTAGACCTCAGCTTCCCT
TCAACACCTGATGTATCTGCTGAAGCTAAGGATCTCATTAGCCAGCTTCTTGTGAAGGAC
TCTTCTAAAAGGCTCTCTCTTCAAAAGATCATGGAGCACCCTTGGGTAATTAAGAATGTC
ACATCACATGACACTATAATCTGA