Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082468
CDS Infomation

pacid=37472458 polypeptide=PGSC0003DMP400055614 locus=PGSC0003DMG400032553 ID=PGSC0003DMT400082468.v4.03 annot-version=v4.03
Sequence

ATGAGCAACGAAGAAGAGAAAAGATGTCCTCTGTGTGCTGAAGAGATGGACTGGACAGAT
CAGCAGTTTAAGCCTTGCAAATGTGGTTATCAGGTGTGTCTTTGGTGTTGGCATCACATA
ATGGACATGGCAGAAAAAGATGAGTCAGAGGGACGATGTCCTGCATGTCGAACAACATAC
GAAAAGGAGAAAGTTGTTAGAATGCAAACAAATATTGAGAGGGCAGGGAACAACAATGCC
AATAGGAAAAGCAAACAACAACCAAAGGCAAAGCCAAAAACTAATGAAGCCAAGAAGGAT
CTCACGAATGTTCGGGTCATTCAACGTAAAATGGCATATGTGATTGGCCTGCCTCTAAAT
CTTGCAGATGAAGATCTTTTACAGCGGAAGGAATATTTTGGGCAGTATGGAAAAGTTACC
AAAATTTCTCTGTCTCGGACAACTGGTGGTGCCATCCAGCAATTTGTTAATGATACCTGT
AGTGTATATATTACATATTCAAAAGAAGAGGAGGCCGTGCGGTGTATTCAGTTTGTACAT
GGTTTTGTCTTGGAAGATAGATATTTGAGAGCATCATTTGGGACTGCAAAATACTGCCAT
GCGTGGTTGAGAAACACGCCTTGCAGTAATCCTTCTTGTCTATATTTGCATAGCATTGGT
GCTGATGAAGATAGCTTTGGCAAAGATGATGTAGCTGCGATTCATACAAGGAATAGAGTT
CAACAAATAGCTGGTGACGCCAGTAATATGATGAACCGTTCAGGAAATGTCTTGCCACCT
CCAATTGATGAATTATCTAGCACTGGCTTTACATTGACTGAGACATCTAGCATTAGAAAT
GCAGATGCATCAAATGATACAGTGAATTACAGTAGCTACATGGCTCATGTAATTCCTCAT
GATAAGGATGGAGACGCTGGTGGACCAAACAGAATGACTACTTTTGTTGATATTGTCGGA
CGGTACAATACTTCTGGTGCAGAGAGAGATGGAAATAGCACGGAAGATTGTAGGATTTTG
AATTTATCTTCTGACCTATCTTCAGTAACCATTAGCAAAGATAATCATAGTCATGAAACA
TATCCTGATAAAATTTTGTTCAAAGTTCCATCTTCAAATCACGTTGTCAATCATCCGCGA
GGCAACCTAAATTTTGTTGAATTTTCAGATGAACCCTACAGGGAAGATTATACATCTTTT
GACAGTCAAGGACTGAAGGATCCAAATAATATGGATCAAAAGGCTTTTCTTATGCCATCT
TGTTCTGCTCAATCCACAGAGAACTCTGGCGGTCGTTTATTAGTACATATGCCATGTAGT
CTGAGTAGCAATAGAATGGATTATGGAGCTTTACATAATCAAGTGGATGAAGCTTCTCTG
CCACTTTCATGTGTAAATGCGATATTAAATGAAGGACTTCATGACTTGAAGTTCCAAAAT
TCTGTCAAATCTGATAGGGTTTACAGAAGTTCTACCTCATTTTCCAATGAAGAAATAGTG
GAGCACCTACGGAGGATTGATGGTGATAACTTGACGAACTATCAAGATTCTTCATTCAAT
GCCATAGAAAGCAGTATTATTTCAAATATTATGTCAAAGGACTTGAATTCATGTGATGAT
TCAATGGCCTTGCGTCGTAGTTTTGTTGGCTCGTATGGTGAATCTGTTGGGAAGCATGGT
GCTTCCTGGAATTCTTTGCACAGCGACCAATTAGGGTTCTCTTTTGTGAAGCAAGATGAC
TTTTCCAGGCAAGGAGGTGATTTGGAGTCGTCTTTTAGAAATATTGGTCAGATGTCAAAG
AATTCATCCATCCTTCAGGATTTCAGAGAGAACAAGGATCAGTATGTGCACAAGGCTCCC
TATCAAATCACCAGACCAAAAGTTTCGGCTCCACCTGGGTTCTCAATGCCCCCAAGGGAC
CTGCCTCACGGTTTTGCCTCATCTGATGATATAGGAGGAATGTCTCGTGCTCTCTCTGGT
AGTCGTTTAGTAAATAGTTCTTCATCAAGTTTGCTTCACACACCATCAACCGGAAGCATT
AGCAGTGCAGGTGATATCGATTTTGTTGACCCTGCCACATCAGTCTTTGGAAATGGCAAA
CCAATAAATGGTTTTGATATATCAGCCTTGGATATTGGGTCAGCTTGCGTGCCACAGAGG
AGAGGGTTTGAAGATGAGGCAAGAATCTGGCATCTTATGCAACAAAAATCTTTAGATCAA
GGGAAATTCTCTCAACGAATTGCTTCTCAAACACCATCCGTGCATCAGTCACGAAGGTTT
CCTAGTCATGGCGGAGATGAGTATCTTGGCCATGATGATATATATGGCTTCTCGTCAAGG
ATGGTGGATCAACACCAAAGTTTCAATCCATCTTCCTATTCACAATTTCCACAGCAGAAG
CTTGCGACAAATGGCCACATCTTTAATGGCTTCCAGCACAATAGCTTGGACGATATCCAT
CGCAGTAATGAAGTGGACAGCATGACACAACACCAGTCAAATGAATCATTAGGTTTCAAA
AAATTCTATGCTGGATATGGAGATGTGATGTTCCAGACGCCCCGGTCTGGCGATGTATAC
ACCAGAGTATTTGGGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055614
PEP Infomation

pacid=37472458 transcript=PGSC0003DMT400082468 locus=PGSC0003DMG400032553 ID=PGSC0003DMT400082468.v4.03 annot-version=v4.03
Sequence

MSNEEEKRCPLCAEEMDWTDQQFKPCKCGYQVCLWCWHHIMDMAEKDESEGRCPACRTTY
EKEKVVRMQTNIERAGNNNANRKSKQQPKAKPKTNEAKKDLTNVRVIQRKMAYVIGLPLN
LADEDLLQRKEYFGQYGKVTKISLSRTTGGAIQQFVNDTCSVYITYSKEEEAVRCIQFVH
GFVLEDRYLRASFGTAKYCHAWLRNTPCSNPSCLYLHSIGADEDSFGKDDVAAIHTRNRV
QQIAGDASNMMNRSGNVLPPPIDELSSTGFTLTETSSIRNADASNDTVNYSSYMAHVIPH
DKDGDAGGPNRMTTFVDIVGRYNTSGAERDGNSTEDCRILNLSSDLSSVTISKDNHSHET
YPDKILFKVPSSNHVVNHPRGNLNFVEFSDEPYREDYTSFDSQGLKDPNNMDQKAFLMPS
CSAQSTENSGGRLLVHMPCSLSSNRMDYGALHNQVDEASLPLSCVNAILNEGLHDLKFQN
SVKSDRVYRSSTSFSNEEIVEHLRRIDGDNLTNYQDSSFNAIESSIISNIMSKDLNSCDD
SMALRRSFVGSYGESVGKHGASWNSLHSDQLGFSFVKQDDFSRQGGDLESSFRNIGQMSK
NSSILQDFRENKDQYVHKAPYQITRPKVSAPPGFSMPPRDLPHGFASSDDIGGMSRALSG
SRLVNSSSSSLLHTPSTGSISSAGDIDFVDPATSVFGNGKPINGFDISALDIGSACVPQR
RGFEDEARIWHLMQQKSLDQGKFSQRIASQTPSVHQSRRFPSHGGDEYLGHDDIYGFSSR
MVDQHQSFNPSSYSQFPQQKLATNGHIFNGFQHNSLDDIHRSNEVDSMTQHQSNESLGFK
KFYAGYGDVMFQTPRSGDVYTRVFGM*

Transcript Sequence

Transcript ID

PGSC0003DMT400082468
Transcript Infomation

pacid=37472458 locus=PGSC0003DMG400032553 ID=PGSC0003DMT400082468.v4.03 annot-version=v4.03
Sequence

ATGAGCAACGAAGAAGAGAAAAGATGTCCTCTGTGTGCTGAAGAGATGGACTGGACAGAT
CAGCAGTTTAAGCCTTGCAAATGTGGTTATCAGGTGTGTCTTTGGTGTTGGCATCACATA
ATGGACATGGCAGAAAAAGATGAGTCAGAGGGACGATGTCCTGCATGTCGAACAACATAC
GAAAAGGAGAAAGTTGTTAGAATGCAAACAAATATTGAGAGGGCAGGGAACAACAATGCC
AATAGGAAAAGCAAACAACAACCAAAGGCAAAGCCAAAAACTAATGAAGCCAAGAAGGAT
CTCACGAATGTTCGGGTCATTCAACGTAAAATGGCATATGTGATTGGCCTGCCTCTAAAT
CTTGCAGATGAAGATCTTTTACAGCGGAAGGAATATTTTGGGCAGTATGGAAAAGTTACC
AAAATTTCTCTGTCTCGGACAACTGGTGGTGCCATCCAGCAATTTGTTAATGATACCTGT
AGTGTATATATTACATATTCAAAAGAAGAGGAGGCCGTGCGGTGTATTCAGTTTGTACAT
GGTTTTGTCTTGGAAGATAGATATTTGAGAGCATCATTTGGGACTGCAAAATACTGCCAT
GCGTGGTTGAGAAACACGCCTTGCAGTAATCCTTCTTGTCTATATTTGCATAGCATTGGT
GCTGATGAAGATAGCTTTGGCAAAGATGATGTAGCTGCGATTCATACAAGGAATAGAGTT
CAACAAATAGCTGGTGACGCCAGTAATATGATGAACCGTTCAGGAAATGTCTTGCCACCT
CCAATTGATGAATTATCTAGCACTGGCTTTACATTGACTGAGACATCTAGCATTAGAAAT
GCAGATGCATCAAATGATACAGTGAATTACAGTAGCTACATGGCTCATGTAATTCCTCAT
GATAAGGATGGAGACGCTGGTGGACCAAACAGAATGACTACTTTTGTTGATATTGTCGGA
CGGTACAATACTTCTGGTGCAGAGAGAGATGGAAATAGCACGGAAGATTGTAGGATTTTG
AATTTATCTTCTGACCTATCTTCAGTAACCATTAGCAAAGATAATCATAGTCATGAAACA
TATCCTGATAAAATTTTGTTCAAAGTTCCATCTTCAAATCACGTTGTCAATCATCCGCGA
GGCAACCTAAATTTTGTTGAATTTTCAGATGAACCCTACAGGGAAGATTATACATCTTTT
GACAGTCAAGGACTGAAGGATCCAAATAATATGGATCAAAAGGCTTTTCTTATGCCATCT
TGTTCTGCTCAATCCACAGAGAACTCTGGCGGTCGTTTATTAGTACATATGCCATGTAGT
CTGAGTAGCAATAGAATGGATTATGGAGCTTTACATAATCAAGTGGATGAAGCTTCTCTG
CCACTTTCATGTGTAAATGCGATATTAAATGAAGGACTTCATGACTTGAAGTTCCAAAAT
TCTGTCAAATCTGATAGGGTTTACAGAAGTTCTACCTCATTTTCCAATGAAGAAATAGTG
GAGCACCTACGGAGGATTGATGGTGATAACTTGACGAACTATCAAGATTCTTCATTCAAT
GCCATAGAAAGCAGTATTATTTCAAATATTATGTCAAAGGACTTGAATTCATGTGATGAT
TCAATGGCCTTGCGTCGTAGTTTTGTTGGCTCGTATGGTGAATCTGTTGGGAAGCATGGT
GCTTCCTGGAATTCTTTGCACAGCGACCAATTAGGGTTCTCTTTTGTGAAGCAAGATGAC
TTTTCCAGGCAAGGAGGTGATTTGGAGTCGTCTTTTAGAAATATTGGTCAGATGTCAAAG
AATTCATCCATCCTTCAGGATTTCAGAGAGAACAAGGATCAGTATGTGCACAAGGCTCCC
TATCAAATCACCAGACCAAAAGTTTCGGCTCCACCTGGGTTCTCAATGCCCCCAAGGGAC
CTGCCTCACGGTTTTGCCTCATCTGATGATATAGGAGGAATGTCTCGTGCTCTCTCTGGT
AGTCGTTTAGTAAATAGTTCTTCATCAAGTTTGCTTCACACACCATCAACCGGAAGCATT
AGCAGTGCAGGTGATATCGATTTTGTTGACCCTGCCACATCAGTCTTTGGAAATGGCAAA
CCAATAAATGGTTTTGATATATCAGCCTTGGATATTGGGTCAGCTTGCGTGCCACAGAGG
AGAGGGTTTGAAGATGAGGCAAGAATCTGGCATCTTATGCAACAAAAATCTTTAGATCAA
GGGAAATTCTCTCAACGAATTGCTTCTCAAACACCATCCGTGCATCAGTCACGAAGGTTT
CCTAGTCATGGCGGAGATGAGTATCTTGGCCATGATGATATATATGGCTTCTCGTCAAGG
ATGGTGGATCAACACCAAAGTTTCAATCCATCTTCCTATTCACAATTTCCACAGCAGAAG
CTTGCGACAAATGGCCACATCTTTAATGGCTTCCAGCACAATAGCTTGGACGATATCCAT
CGCAGTAATGAAGTGGACAGCATGACACAACACCAGTCAAATGAATCATTAGGTTTCAAA
AAATTCTATGCTGGATATGGAGATGTGATGTTCCAGACGCCCCGGTCTGGCGATGTATAC
ACCAGAGTATTTGGGATGTAA